> top > docs > PubMed:10096561 > annotations

PubMed:10096561 JSONTXT

Annnotations TAB JSON ListView MergeView

jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 15-19 protein denotes CD40
T2 76-98 cell_type denotes cytotoxic T lymphocyte
T3 182-186 protein denotes CD40
T4 324-328 protein denotes CD40
T5 392-396 protein denotes CD40
T6 427-446 cell_line denotes human MM cell lines
T7 517-527 cell_line denotes cell lines
T8 566-570 protein denotes CD40
T9 581-585 protein denotes CD40
T10 618-622 protein denotes CD40
T11 655-664 protein denotes IFN-gamma
T12 669-696 protein denotes tumor necrosis factor-alpha
T13 708-730 protein denotes interleukin (IL)-1beta
T14 734-738 protein denotes CD40
T15 751-755 protein denotes CD40
T16 774-806 cell_line denotes CD40L-transfected murine L-cells
T17 823-843 protein denotes CD40L fusion protein
T18 877-910 protein denotes intercellular adhesion molecule-1
T19 915-949 protein denotes MHC class I and class II molecules
T20 973-977 protein denotes IL-6
T21 979-983 protein denotes IL-8
T22 985-1008 protein denotes tumor necrosis factor-a
T23 1014-1062 protein denotes granulocyte macrophage colony-stimulating factor
T24 1106-1126 protein denotes transcription factor
T25 1127-1148 protein denotes nuclear factor kappaB
T26 1163-1167 protein denotes CD40
T27 1182-1217 cell_line denotes HLA-A2+, MelanA/MART1+ MM cell line
T28 1269-1320 cell_line denotes HLA-A2-restricted, MelanA/MART-1-specific CTL clone
T29 1331-1335 protein denotes CD40
T30 1420-1424 protein denotes CD40
T31 1424-1430 protein denotes -CD40L
T32 1535-1539 protein denotes CD40

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-136 Sentence denotes Stimulation of CD40 on immunogenic human malignant melanomas augments their cytotoxic T lymphocyte-mediated lysis and induces apoptosis.
S2 137-222 Sentence denotes Here, we report the functional expression of CD40 on human malignant melanomas (MMs).
S3 223-391 Sentence denotes Comparison of tumor specimen from MM precursor lesions, primary tumors, and metastases revealed that CD40 surface expression is down-regulated during tumor progression.
S4 392-580 Sentence denotes CD40 expression was confirmed in 7 human MM cell lines established from immunogenic primary tumors or metastases, whereas 11 cell lines established from advanced stages were CD40 negative.
S5 581-750 Sentence denotes CD40 expression could be enhanced in CD40-positive MM by stimulation with IFN-gamma and tumor necrosis factor-alpha but not by interleukin (IL)-1beta or CD40 triggering.
S6 751-1149 Sentence denotes CD40 ligation on MM by CD40L-transfected murine L-cells or by a soluble CD40L fusion protein up-regulated their expression of intercellular adhesion molecule-1 and MHC class I and class II molecules and their secretion of IL-6, IL-8, tumor necrosis factor-a, and granulocyte macrophage colony-stimulating factor and also induced a rapid activation of the transcription factor nuclear factor kappaB.
S7 1150-1321 Sentence denotes Furthermore, CD40 ligation of a HLA-A2+, MelanA/MART1+ MM cell line enhanced its susceptibility to specific lysis by a HLA-A2-restricted, MelanA/MART-1-specific CTL clone.
S8 1322-1391 Sentence denotes Finally, CD40 ligation induced growth inhibition and apoptosis in MM.
S9 1392-1571 Sentence denotes These results indicate that CD40-CD40L interactions may play an important role in augmenting antitumor immunity and inducing apoptosis in some CD40-positive immunogenic human MMs.

genia-medco-coref

Id Subject Object Predicate Lexical cue
C1 15-19 NP denotes CD40
C2 23-60 NP denotes immunogenic human malignant melanomas
C3 70-75 NP denotes their
C4 126-135 NP denotes apoptosis
C5 182-186 NP denotes CD40
C6 190-221 NP denotes human malignant melanomas (MMs)
C7 299-309 NP denotes metastases
C8 392-407 NP denotes CD40 expression
C9 494-504 NP denotes metastases
C10 581-596 NP denotes CD40 expression
C11 768-770 NP denotes MM
C12 857-862 NP denotes their
C13 954-959 NP denotes their
C14 1163-1217 NP denotes CD40 ligation of a HLA-A2+, MelanA/MART1+ MM cell line
C15 1227-1230 NP denotes its
C16 1375-1384 NP denotes apoptosis
C17 1388-1390 NP denotes MM
C18 1517-1526 NP denotes apoptosis
R1 C3 C2 coref-pron their,immunogenic human malignant melanomas
R2 C5 C1 coref-ident CD40,CD40
R3 C6 C2 coref-ident human malignant melanomas (MMs),immunogenic human malignant melanomas
R4 C9 C7 coref-ident metastases,metastases
R5 C10 C8 coref-ident CD40 expression,CD40 expression
R6 C11 C6 coref-ident MM,human malignant melanomas (MMs)
R7 C12 C11 coref-pron their,MM
R8 C13 C11 coref-pron their,MM
R9 C15 C14 coref-pron its,"CD40 ligation of a HLA-A2+, MelanA/MART1+ MM cell line"
R10 C16 C4 coref-ident apoptosis,apoptosis
R11 C17 C11 coref-ident MM,MM
R12 C18 C16 coref-ident apoptosis,apoptosis

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 15-19 protein_molecule denotes CD40
T2 23-60 tissue denotes immunogenic human malignant melanomas
T3 76-98 cell_type denotes cytotoxic T lymphocyte
T4 126-135 other_name denotes apoptosis
T5 182-186 protein_molecule denotes CD40
T6 190-215 tissue denotes human malignant melanomas
T7 217-220 tissue denotes MMs
T8 237-251 tissue denotes tumor specimen
T9 257-277 tissue denotes MM precursor lesions
T10 279-293 tissue denotes primary tumors
T11 299-309 other_name denotes metastases
T12 324-328 protein_molecule denotes CD40
T13 373-390 other_name denotes tumor progression
T14 392-396 protein_molecule denotes CD40
T15 427-446 cell_line denotes human MM cell lines
T16 464-475 tissue denotes immunogenic
T17 476-490 tissue denotes primary tumors
T18 494-504 other_name denotes metastases
T19 517-527 cell_line denotes cell lines
T20 566-570 protein_molecule denotes CD40
T21 581-585 protein_molecule denotes CD40
T22 618-622 protein_molecule denotes CD40
T23 655-664 protein_molecule denotes IFN-gamma
T24 669-696 protein_molecule denotes tumor necrosis factor-alpha
T25 708-730 protein_molecule denotes interleukin (IL)-1beta
T26 734-738 protein_molecule denotes CD40
T27 751-755 protein_molecule denotes CD40
T28 768-770 tissue denotes MM
T29 774-779 protein_molecule denotes CD40L
T30 823-828 protein_molecule denotes CD40L
T31 877-910 protein_molecule denotes intercellular adhesion molecule-1
T32 973-977 protein_molecule denotes IL-6
T33 979-983 protein_molecule denotes IL-8
T34 985-1008 protein_molecule denotes tumor necrosis factor-a
T35 1014-1062 protein_molecule denotes granulocyte macrophage colony-stimulating factor
T36 1106-1126 protein_family_or_group denotes transcription factor
T37 1127-1148 protein_complex denotes nuclear factor kappaB
T38 1163-1167 protein_molecule denotes CD40
T39 1182-1204 cell_line denotes HLA-A2+, MelanA/MART1+
T40 1205-1207 tissue denotes MM
T41 1269-1320 cell_line denotes HLA-A2-restricted, MelanA/MART-1-specific CTL clone
T42 1331-1335 protein_molecule denotes CD40
T43 1353-1370 other_name denotes growth inhibition
T44 1375-1384 other_name denotes apoptosis
T45 1388-1390 tissue denotes MM
T46 1420-1424 protein_molecule denotes CD40
T47 1424-1430 protein_molecule denotes -CD40L
T48 1485-1503 other_name denotes antitumor immunity
T49 1517-1526 other_name denotes apoptosis
T50 1535-1539 protein_molecule denotes CD40
T51 1567-1570 tissue denotes MMs

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 196-215 HP_0002861 denotes malignant melanomas
T2 206-215 HP_0002861 denotes melanomas
T3 237-242 HP_0002664 denotes tumor
T4 287-293 HP_0002664 denotes tumors
T5 373-378 HP_0002664 denotes tumor
T6 484-490 HP_0002664 denotes tumors
T7 669-674 HP_0002664 denotes tumor
T8 985-990 HP_0002664 denotes tumor