PubMed:10092801
Annnotations
jnlpba-st-training
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 9-24 | cell_type | denotes | fetal thymocyte |
| T2 | 87-97 | protein | denotes | NF-kappa B |
| T3 | 324-334 | protein | denotes | NF-kappa B |
| T4 | 345-360 | protein | denotes | I kappa B alpha |
| T5 | 362-375 | protein | denotes | mut-I kappa B |
| T6 | 428-438 | protein | denotes | NF-kappa B |
| T7 | 489-505 | cell_type | denotes | Fetal thymocytes |
| T8 | 542-555 | protein | denotes | mut-I kappa B |
| T9 | 597-601 | protein | denotes | CD44 |
| T10 | 609-612 | protein | denotes | CD4 |
| T11 | 613-616 | protein | denotes | CD8 |
| T12 | 868-882 | protein | denotes | TCR beta-chain |
| T13 | 963-976 | protein | denotes | mut-I kappa B |
| T14 | 1064-1074 | protein | denotes | NF-kappa B |
| T15 | 1144-1154 | cell_type | denotes | thymocytes |
pubmed-sentences-benchmark
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| S1 | 0-109 | Sentence | denotes | Impaired fetal thymocyte development after efficient adenovirus-mediated inhibition of NF-kappa B activation. |
| S2 | 110-231 | Sentence | denotes | We introduce a new experimental system combining adenovirus-mediated gene transfer and fetal thymic organ culture (FTOC). |
| S3 | 232-488 | Sentence | denotes | This system allowed us to efficiently express in developing thymocytes a mutant form of the NF-kappa B inhibitor I kappa B alpha (mut-I kappa B) and to study the maturation defects occurring when NF-kappa B activation is inhibited during fetal development. |
| S4 | 489-744 | Sentence | denotes | Fetal thymocytes infected with adenovirus containing mut-I kappa B were found to develop normally until the CD44-CD25+, CD4-CD8- double-negative stage, while production of more mature double-positive and single-positive populations was strongly decreased. |
| S5 | 745-883 | Sentence | denotes | Proliferation, as measured by the percentage of cells in cycle appeared normal, as did rearrangement and expression of the TCR beta-chain. |
| S6 | 884-1020 | Sentence | denotes | However, apoptosis was much higher in FTOC infected with adenovirus containing mut-I kappa B than in FTOC infected with a control virus. |
| S7 | 1021-1196 | Sentence | denotes | Taken together, these results suggest that NF-kappa B plays a crucial role in ensuring the differentiation and survival of thymocytes in the early stages of their development. |
genia-medco-coref
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| C1 | 87-108 | NP | denotes | NF-kappa B activation |
| C2 | 123-230 | NP | denotes | a new experimental system combining adenovirus-mediated gene transfer and fetal thymic organ culture (FTOC) |
| C3 | 232-243 | NP | denotes | This system |
| C4 | 303-376 | NP | denotes | a mutant form of the NF-kappa B inhibitor I kappa B alpha (mut-I kappa B) |
| C5 | 428-449 | NP | denotes | NF-kappa B activation |
| C7 | 542-555 | NP | denotes | mut-I kappa B |
| C6 | 520-555 | NP | denotes | adenovirus containing mut-I kappa B |
| C9 | 963-976 | NP | denotes | mut-I kappa B |
| C8 | 941-976 | NP | denotes | adenovirus containing mut-I kappa B |
| C10 | 1144-1154 | NP | denotes | thymocytes |
| C11 | 1178-1183 | NP | denotes | their |
| R1 | C3 | C2 | coref-ident | This system,a new experimental system combining adenovirus-mediated gene transfer and fetal thymic organ culture (FTOC) |
| R2 | C5 | C1 | coref-ident | NF-kappa B activation,NF-kappa B activation |
| R3 | C7 | C4 | coref-ident | mut-I kappa B,a mutant form of the NF-kappa B inhibitor I kappa B alpha (mut-I kappa B) |
| R4 | C9 | C7 | coref-ident | mut-I kappa B,mut-I kappa B |
| R5 | C8 | C6 | coref-ident | adenovirus containing mut-I kappa B,adenovirus containing mut-I kappa B |
| R6 | C11 | C10 | coref-pron | their,thymocytes |
GENIAcorpus
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 9-24 | cell_type | denotes | fetal thymocyte |
| T2 | 53-63 | virus | denotes | adenovirus |
| T3 | 87-97 | protein_molecule | denotes | NF-kappa B |
| T4 | 129-148 | other_name | denotes | experimental system |
| T5 | 159-169 | virus | denotes | adenovirus |
| T6 | 197-223 | other_artificial_source | denotes | fetal thymic organ culture |
| T7 | 225-229 | other_artificial_source | denotes | FTOC |
| T8 | 324-334 | protein_complex | denotes | NF-kappa B |
| T9 | 345-360 | protein_molecule | denotes | I kappa B alpha |
| T10 | 362-375 | protein_molecule | denotes | mut-I kappa B |
| T11 | 428-438 | protein_complex | denotes | NF-kappa B |
| T12 | 489-505 | cell_type | denotes | Fetal thymocytes |
| T13 | 520-530 | virus | denotes | adenovirus |
| T14 | 542-555 | protein_molecule | denotes | mut-I kappa B |
| T15 | 597-601 | protein_molecule | denotes | CD44 |
| T16 | 609-612 | protein_molecule | denotes | CD4 |
| T17 | 613-616 | protein_molecule | denotes | CD8 |
| T18 | 666-688 | other_name | denotes | mature double-positive |
| T19 | 693-720 | other_name | denotes | single-positive populations |
| T20 | 868-882 | protein_subunit | denotes | TCR beta-chain |
| T21 | 922-926 | other_artificial_source | denotes | FTOC |
| T22 | 941-951 | virus | denotes | adenovirus |
| T23 | 963-976 | protein_molecule | denotes | mut-I kappa B |
| T24 | 985-989 | other_artificial_source | denotes | FTOC |
| T25 | 1006-1019 | virus | denotes | control virus |
| T26 | 1064-1074 | protein_complex | denotes | NF-kappa B |
| T27 | 1144-1154 | cell_type | denotes | thymocytes |