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PubMed:10087181 JSONTXT

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jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 0-16 protein denotes Interferon-alpha
T2 30-40 protein denotes STATs1, -3
T3 89-92 protein denotes Lck
T4 104-128 protein denotes mitogen-activated kinase
T5 132-139 cell_type denotes T cells
T6 148-159 protein denotes interferons
T7 161-165 protein denotes IFNs
T8 183-192 protein denotes cytokines
T9 288-297 protein denotes cytokines
T10 427-430 protein denotes JAK
T11 430-435 protein denotes -STAT
T12 501-518 protein denotes Src-family kinase
T13 519-522 protein denotes Lck
T14 526-529 protein denotes JAK
T15 529-534 protein denotes -STAT
T16 604-607 protein denotes Lck
T17 611-620 protein denotes IFN-alpha
T18 661-684 cell_line denotes Lck-defective cell line
T19 698-704 cell_line denotes Jurkat
T20 711-719 cell_line denotes JCam/Lck
T21 721-731 cell_line denotes JCam cells
T22 737-740 protein denotes Lck
T23 774-783 protein denotes IFN-alpha
T24 795-799 protein denotes MAPK
T25 839-842 protein denotes Lck
T26 857-870 protein denotes STATs1 and -3
T27 946-949 protein denotes Lck
T28 964-987 cell_line denotes IFN-alpha-treated cells
T29 1027-1036 protein denotes IFN-alpha
T30 1122-1125 protein denotes Lck
T31 1137-1141 protein denotes MAPK
T32 1156-1165 protein denotes IFN-alpha

genia-medco-coref

Id Subject Object Predicate Lexical cue
C1 141-166 NP denotes Type I interferons (IFNs)
C2 183-192 NP denotes cytokines
C3 193-197 NP denotes that
C4 259-272 NP denotes the processes
C5 276-281 NP denotes which
C6 282-297 NP denotes these cytokines
C7 427-445 NP denotes JAK-STAT signaling
C8 497-522 NP denotes the Src-family kinase Lck
C9 526-544 NP denotes JAK-STAT signaling
C10 604-607 NP denotes Lck
C11 640-750 NP denotes the Jurkat, JCam (an Lck-defective cell line derived from Jurkat), and JCam/Lck (JCam cells with Lck restored)
C12 774-783 NP denotes IFN-alpha
C13 839-842 NP denotes Lck
C14 1027-1036 NP denotes IFN-alpha
C15 1075-1095 NP denotes all three cell lines
C16 1122-1125 NP denotes Lck
R1 C3 C2 coref-relat that,cytokines
R2 C5 C4 coref-relat which,the processes
R3 C6 C1 coref-ident these cytokines,Type I interferons (IFNs)
R4 C9 C7 coref-ident JAK-STAT signaling,JAK-STAT signaling
R5 C10 C8 coref-ident Lck,the Src-family kinase Lck
R6 C13 C10 coref-ident Lck,Lck
R7 C14 C12 coref-ident IFN-alpha,IFN-alpha
R8 C15 C11 coref-ident all three cell lines,"the Jurkat, JCam (an Lck-defective cell line derived from Jurkat), and JCam/Lck (JCam cells with Lck restored)"
R9 C16 C13 coref-ident Lck,Lck

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-140 Sentence denotes Interferon-alpha induction of STATs1, -3 DNA binding and growth arrest is independent of Lck and active mitogen-activated kinase in T cells.
S2 141-243 Sentence denotes Type I interferons (IFNs) are a family of cytokines that have antiviral and antiproliferative effects.
S3 244-388 Sentence denotes Data regarding the processes by which these cytokines transduce signals from the cell membrane to the nucleus are becoming increasingly complex.
S4 389-446 Sentence denotes The most characterized pathway is via JAK-STAT signaling.
S5 447-545 Sentence denotes Previous studies established a potential role for the Src-family kinase Lck in JAK-STAT signaling.
S6 546-751 Sentence denotes Therefore, this study was designed to analyze the role of Lck in IFN-alpha signaling by using the Jurkat, JCam (an Lck-defective cell line derived from Jurkat), and JCam/Lck (JCam cells with Lck restored).
S7 752-843 Sentence denotes The results show that IFN-alpha can induce MAPK activity, but only in cells containing Lck.
S8 844-988 Sentence denotes Furthermore, STATs1 and -3 are effectively phosphorylated and activated to bind DNA in the absence of Lck expression in IFN-alpha-treated cells.
S9 989-1096 Sentence denotes Finally, the results demonstrate that IFN-alpha exerts an antiproliferative effect in all three cell lines.
S10 1097-1239 Sentence denotes These data indicate that Lck and active MAPK do not affect IFN-alpha-induced growth arrest or induction of STAT1s1 and -3 DNA binding ability.

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 0-16 protein_molecule denotes Interferon-alpha
T2 89-92 protein_molecule denotes Lck
T3 104-128 protein_molecule denotes mitogen-activated kinase
T4 132-139 cell_type denotes T cells
T5 148-159 protein_family_or_group denotes interferons
T6 161-165 protein_family_or_group denotes IFNs
T7 183-192 protein_family_or_group denotes cytokines
T8 288-297 protein_family_or_group denotes cytokines
T9 325-338 cell_component denotes cell membrane
T10 346-353 cell_component denotes nucleus
T11 427-430 protein_family_or_group denotes JAK
T12 430-435 protein_family_or_group denotes -STAT
T13 501-518 protein_family_or_group denotes Src-family kinase
T14 519-522 protein_molecule denotes Lck
T15 526-529 protein_family_or_group denotes JAK
T16 529-534 protein_family_or_group denotes -STAT
T17 604-607 protein_molecule denotes Lck
T18 611-620 protein_molecule denotes IFN-alpha
T19 661-664 protein_molecule denotes Lck
T20 698-704 cell_line denotes Jurkat
T21 711-716 cell_line denotes JCam/
T22 716-719 protein_molecule denotes Lck
T23 721-731 cell_line denotes JCam cells
T24 737-740 protein_molecule denotes Lck
T25 774-783 protein_molecule denotes IFN-alpha
T26 795-799 protein_family_or_group denotes MAPK
T27 839-842 protein_molecule denotes Lck
T28 946-949 protein_molecule denotes Lck
T29 964-973 protein_molecule denotes IFN-alpha
T30 1027-1036 protein_molecule denotes IFN-alpha
T31 1047-1071 other_name denotes antiproliferative effect
T32 1122-1125 protein_molecule denotes Lck
T33 1137-1141 protein_family_or_group denotes MAPK
T34 1156-1165 protein_molecule denotes IFN-alpha
T35 1204-1238 other_name denotes STAT1s1 and -3 DNA binding ability