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PubMed:10082436 JSONTXT

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jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 22-25 protein denotes DQ2
T2 30-33 protein denotes DQ8
T3 64-110 protein denotes DQA1*0501/DQB1*0302 trans class II heterodimer
T4 112-167 protein denotes DQalpha and DQbeta trans heterodimeric HLA-DQ molecules
T5 209-212 protein denotes DQ2
T6 217-220 protein denotes DQ8
T7 308-320 protein denotes trans-dimers
T8 350-374 protein denotes cis-encoded DQ molecules
T9 470-493 protein denotes HLA-DQA1*0501/DQB1*0302
T10 541-553 protein denotes DQ molecules
T11 726-731 protein denotes dimer

genia-medco-coref

Id Subject Object Predicate Lexical cue
C1 112-167 NP denotes DQalpha and DQbeta trans heterodimeric HLA-DQ molecules
C2 303-320 NP denotes such trans-dimers
C3 322-327 NP denotes which
C4 502-519 NP denotes a peptide antigen
C5 520-525 NP denotes which
R1 C2 C1 coref-ident such trans-dimers,DQalpha and DQbeta trans heterodimeric HLA-DQ molecules
R2 C3 C2 coref-relat which,such trans-dimers
R3 C5 C4 coref-relat which,a peptide antigen

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-111 Sentence denotes Impaired binding of a DQ2 and DQ8-binding HSV VP16 peptide to a DQA1*0501/DQB1*0302 trans class II heterodimer.
S2 112-235 Sentence denotes DQalpha and DQbeta trans heterodimeric HLA-DQ molecules form in individuals heterozygous for the DQ2 and DQ8 specificities.
S3 236-415 Sentence denotes Unique functions and disease associations have been postulated for such trans-dimers, which may be different from cis-encoded DQ molecules encoded by the corresponding haplotypes.
S4 416-590 Sentence denotes We analyzed the ability of the trans-dimer encoded by HLA-DQA1*0501/DQB1*0302 to bind a peptide antigen which interacts with DQ molecules encoded by both parental haplotypes.
S5 591-778 Sentence denotes Markedly impaired binding was observed, consistent with both the use of different anchor residues and with changes in levels of DQ cis-dimer availability for peptide binding interactions.

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 22-25 protein_molecule denotes DQ2
T2 30-33 protein_molecule denotes DQ8
T3 42-58 peptide denotes HSV VP16 peptide
T4 64-110 protein_complex denotes DQA1*0501/DQB1*0302 trans class II heterodimer
T5 112-150 protein_complex denotes DQalpha and DQbeta trans heterodimeric
T6 151-167 protein_family_or_group denotes HLA-DQ molecules
T7 209-212 protein_molecule denotes DQ2
T8 217-220 protein_molecule denotes DQ8
T9 308-320 protein_complex denotes trans-dimers
T10 350-374 protein_family_or_group denotes cis-encoded DQ molecules
T11 404-414 other_name denotes haplotypes
T12 470-493 protein_complex denotes HLA-DQA1*0501/DQB1*0302
T13 541-553 protein_family_or_group denotes DQ molecules
T14 570-589 other_name denotes parental haplotypes
T15 673-688 amino_acid_monomer denotes anchor residues
T16 719-726 other_name denotes DQ cis-
T17 726-731 protein_subunit denotes dimer
T18 749-777 other_name denotes peptide binding interactions