PubMed:10078502
Annnotations
jnlpba-st-training
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 61-70 | cell_type | denotes | platelets |
| T2 | 326-359 | protein | denotes | regulatory and catalytic subunits |
| T3 | 363-392 | protein | denotes | cAMP-dependent protein kinase |
| T4 | 394-410 | protein | denotes | protein kinase A |
| T5 | 437-441 | protein | denotes | Rap1 |
| T6 | 446-455 | cell_type | denotes | platelets |
| T7 | 564-573 | cell_type | denotes | Platelets |
| T8 | 720-749 | protein | denotes | cAMP-dependent protein kinase |
| T9 | 754-758 | protein | denotes | Rap1 |
| T10 | 881-898 | protein | denotes | catalytic subunit |
| T11 | 902-931 | protein | denotes | cAMP-dependent protein kinase |
| T12 | 1219-1238 | protein | denotes | regulatory subunits |
| T13 | 1263-1292 | protein | denotes | cAMP-dependent protein kinase |
| T14 | 1316-1320 | protein | denotes | Rap1 |
| T15 | 1456-1460 | protein | denotes | Rap1 |
| T16 | 1469-1486 | protein | denotes | catalytic subunit |
| T17 | 1490-1519 | protein | denotes | cAMP-dependent protein kinase |
| T18 | 1539-1548 | cell_type | denotes | platelets |
genia-medco-coref
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| C1 | 17-57 | NP | denotes | cyclic adenosine monophosphate signaling |
| C2 | 100-116 | NP | denotes | bipolar disorder |
| C4 | 267-283 | NP | denotes | bipolar disorder |
| C3 | 253-283 | NP | denotes | patients with bipolar disorder |
| C6 | 363-411 | NP | denotes | cAMP-dependent protein kinase (protein kinase A) |
| C8 | 421-424 | NP | denotes | its |
| C7 | 416-435 | NP | denotes | 1 of its substrates |
| C9 | 437-441 | NP | denotes | Rap1 |
| C5 | 363-441 | NP | denotes | cAMP-dependent protein kinase (protein kinase A) and 1 of its substrates, Rap1 |
| C12 | 516-532 | NP | denotes | bipolar disorder |
| C11 | 461-532 | NP | denotes | untreated euthymic, manic, and depressed patients with bipolar disorder |
| C13 | 537-553 | NP | denotes | healthy subjects |
| C10 | 461-553 | NP | denotes | untreated euthymic, manic, and depressed patients with bipolar disorder and healthy subjects |
| C16 | 622-638 | NP | denotes | bipolar disorder |
| C15 | 594-680 | NP | denotes | 112 drug-free patients with bipolar disorder (52 euthymic, 29 depressed, and 31 manic) |
| C17 | 685-704 | NP | denotes | 62 healthy subjects |
| C14 | 594-704 | NP | denotes | 112 drug-free patients with bipolar disorder (52 euthymic, 29 depressed, and 31 manic) and 62 healthy subjects |
| C19 | 720-749 | NP | denotes | cAMP-dependent protein kinase |
| C20 | 754-758 | NP | denotes | Rap1 |
| C18 | 720-758 | NP | denotes | cAMP-dependent protein kinase and Rap1 |
| C22 | 902-931 | NP | denotes | cAMP-dependent protein kinase |
| C21 | 877-931 | NP | denotes | the catalytic subunit of cAMP-dependent protein kinase |
| C23 | 1049-1065 | NP | denotes | bipolar disorder |
| C24 | 1113-1129 | NP | denotes | bipolar disorder |
| C25 | 1134-1150 | NP | denotes | healthy subjects |
| C26 | 1263-1292 | NP | denotes | cAMP-dependent protein kinase |
| C27 | 1316-1320 | NP | denotes | Rap1 |
| C28 | 1358-1407 | NP | denotes | untreated euthymic, depressed, and manic patients |
| C29 | 1416-1431 | NP | denotes | healthy persons |
| C30 | 1456-1460 | NP | denotes | Rap1 |
| C32 | 1490-1519 | NP | denotes | cAMP-dependent protein kinase |
| C31 | 1465-1519 | NP | denotes | the catalytic subunit of cAMP-dependent protein kinase |
| C33 | 1552-1568 | NP | denotes | bipolar patients |
| C34 | 1643-1657 | NP | denotes | cAMP signaling |
| C35 | 1681-1697 | NP | denotes | bipolar disorder |
| R1 | C4 | C2 | coref-ident | bipolar disorder,bipolar disorder |
| R2 | C8 | C6 | coref-pron | its,cAMP-dependent protein kinase (protein kinase A) |
| R3 | C9 | C7 | coref-appos | Rap1,1 of its substrates |
| R4 | C12 | C4 | coref-ident | bipolar disorder,bipolar disorder |
| R5 | C16 | C12 | coref-ident | bipolar disorder,bipolar disorder |
| R6 | C15 | C11 | coref-ident | "112 drug-free patients with bipolar disorder (52 euthymic, 29 depressed, and 31 manic)","untreated euthymic, manic, and depressed patients with bipolar disorder" |
| R7 | C17 | C13 | coref-ident | 62 healthy subjects,healthy subjects |
| R8 | C14 | C10 | coref-ident | "112 drug-free patients with bipolar disorder (52 euthymic, 29 depressed, and 31 manic) and 62 healthy subjects","untreated euthymic, manic, and depressed patients with bipolar disorder and healthy subjects" |
| R9 | C19 | C6 | coref-ident | cAMP-dependent protein kinase,cAMP-dependent protein kinase (protein kinase A) |
| R10 | C20 | C7 | coref-ident | Rap1,1 of its substrates |
| R11 | C18 | C5 | coref-ident | cAMP-dependent protein kinase and Rap1,"cAMP-dependent protein kinase (protein kinase A) and 1 of its substrates, Rap1" |
| R12 | C22 | C19 | coref-ident | cAMP-dependent protein kinase,cAMP-dependent protein kinase |
| R13 | C23 | C16 | coref-ident | bipolar disorder,bipolar disorder |
| R14 | C24 | C23 | coref-ident | bipolar disorder,bipolar disorder |
| R15 | C25 | C17 | coref-ident | healthy subjects,62 healthy subjects |
| R16 | C26 | C22 | coref-ident | cAMP-dependent protein kinase,cAMP-dependent protein kinase |
| R17 | C27 | C20 | coref-ident | Rap1,Rap1 |
| R18 | C28 | C15 | coref-ident | "untreated euthymic, depressed, and manic patients","112 drug-free patients with bipolar disorder (52 euthymic, 29 depressed, and 31 manic)" |
| R19 | C29 | C25 | coref-ident | healthy persons,healthy subjects |
| R20 | C30 | C27 | coref-ident | Rap1,Rap1 |
| R21 | C32 | C26 | coref-ident | cAMP-dependent protein kinase,cAMP-dependent protein kinase |
| R22 | C31 | C21 | coref-ident | the catalytic subunit of cAMP-dependent protein kinase,the catalytic subunit of cAMP-dependent protein kinase |
| R23 | C33 | C3 | coref-ident | bipolar patients,patients with bipolar disorder |
| R24 | C34 | C1 | coref-ident | cAMP signaling,cyclic adenosine monophosphate signaling |
| R25 | C35 | C24 | coref-ident | bipolar disorder,bipolar disorder |
pubmed-sentences-benchmark
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| S1 | 0-117 | Sentence | denotes | Abnormalities of cyclic adenosine monophosphate signaling in platelets from untreated patients with bipolar disorder. |
| S2 | 118-284 | Sentence | denotes | BACKGROUND: Abnormalities in the cyclic adenosine monophosphate (cAMP)-dependent phosphorylation system have been recently reported in patients with bipolar disorder. |
| S3 | 285-554 | Sentence | denotes | We evaluated the immunoreactivity of the regulatory and catalytic subunits of cAMP-dependent protein kinase (protein kinase A) and 1 of its substrates, Rap1, in platelets from untreated euthymic, manic, and depressed patients with bipolar disorder and healthy subjects. |
| S4 | 555-705 | Sentence | denotes | METHODS: Platelets were collected from 112 drug-free patients with bipolar disorder (52 euthymic, 29 depressed, and 31 manic) and 62 healthy subjects. |
| S5 | 706-845 | Sentence | denotes | The levels of cAMP-dependent protein kinase and Rap1 were assessed by Western blot analysis, immunostaining, and computer-assisted imaging. |
| S6 | 846-1151 | Sentence | denotes | RESULTS: The immunolabeling of the catalytic subunit of cAMP-dependent protein kinase was significantly different among groups (P<.001), with higher values in untreated depressed and manic patients with bipolar disorder compared with untreated euthymic patients with bipolar disorder and healthy subjects. |
| S7 | 1152-1293 | Sentence | denotes | No significant differences were found in the immunolabeling of the regulatory subunits (type I and type II) of cAMP-dependent protein kinase. |
| S8 | 1294-1432 | Sentence | denotes | The immunolabeling of Rap1 was significantly higher (P<.001) in untreated euthymic, depressed, and manic patients than in healthy persons. |
| S9 | 1433-1569 | Sentence | denotes | CONCLUSIONS: Levels of Rap1 and the catalytic subunit of cAMP-dependent protein kinase are altered in the platelets of bipolar patients. |
| S10 | 1570-1698 | Sentence | denotes | These findings may provide clues toward understanding the involvement of cAMP signaling in the pathogenesis of bipolar disorder. |
GENIAcorpus
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 17-47 | nucleotide | denotes | cyclic adenosine monophosphate |
| T2 | 61-70 | cell_type | denotes | platelets |
| T3 | 100-116 | other_name | denotes | bipolar disorder |
| T4 | 151-181 | nucleotide | denotes | cyclic adenosine monophosphate |
| T5 | 267-283 | other_name | denotes | bipolar disorder |
| T6 | 302-318 | other_name | denotes | immunoreactivity |
| T7 | 363-392 | protein_family_or_group | denotes | cAMP-dependent protein kinase |
| T8 | 394-410 | protein_molecule | denotes | protein kinase A |
| T9 | 437-441 | protein_molecule | denotes | Rap1 |
| T10 | 446-455 | cell_type | denotes | platelets |
| T11 | 516-532 | other_name | denotes | bipolar disorder |
| T12 | 537-553 | multi_cell | denotes | healthy subjects |
| T13 | 564-573 | cell_type | denotes | Platelets |
| T14 | 598-616 | other_name | denotes | drug-free patients |
| T15 | 622-638 | other_name | denotes | bipolar disorder |
| T16 | 688-704 | multi_cell | denotes | healthy subjects |
| T17 | 720-749 | protein_family_or_group | denotes | cAMP-dependent protein kinase |
| T18 | 754-758 | protein_molecule | denotes | Rap1 |
| T19 | 819-844 | other_name | denotes | computer-assisted imaging |
| T20 | 881-898 | protein_subunit | denotes | catalytic subunit |
| T21 | 902-931 | protein_family_or_group | denotes | cAMP-dependent protein kinase |
| T22 | 1029-1043 | multi_cell | denotes | manic patients |
| T23 | 1049-1065 | other_name | denotes | bipolar disorder |
| T24 | 1080-1107 | multi_cell | denotes | untreated euthymic patients |
| T25 | 1113-1129 | other_name | denotes | bipolar disorder |
| T26 | 1134-1150 | multi_cell | denotes | healthy subjects |
| T27 | 1219-1238 | protein_subunit | denotes | regulatory subunits |
| T28 | 1263-1292 | protein_family_or_group | denotes | cAMP-dependent protein kinase |
| T29 | 1316-1320 | protein_molecule | denotes | Rap1 |
| T30 | 1416-1431 | multi_cell | denotes | healthy persons |
| T31 | 1456-1460 | protein_molecule | denotes | Rap1 |
| T32 | 1469-1486 | protein_subunit | denotes | catalytic subunit |
| T33 | 1490-1519 | protein_family_or_group | denotes | cAMP-dependent protein kinase |
| T34 | 1539-1548 | cell_type | denotes | platelets |
| T35 | 1552-1568 | multi_cell | denotes | bipolar patients |
| T36 | 1643-1647 | nucleotide | denotes | cAMP |
| T37 | 1681-1697 | other_name | denotes | bipolar disorder |
PubmedHPO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4 | 516-532 | HP_0007302 | denotes | bipolar disorder |
| T3 | 492-501 | HP_0000716 | denotes | depressed |
| T2 | 481-486 | HP_0100754 | denotes | manic |
| T1 | 267-283 | HP_0007302 | denotes | bipolar disorder |