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PubMed:10077156 JSONTXT

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jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 44-54 cell_type denotes neutrophil
T2 171-181 cell_type denotes neutrophil
T3 340-367 protein denotes tumor necrosis factor-alpha
T4 416-439 protein denotes glucocorticoid receptor
T5 552-566 protein denotes beta2 integrin
T6 574-584 cell_type denotes neutrophil
T7 628-638 cell_type denotes neutrophil
T8 693-703 cell_type denotes neutrophil
T9 859-869 cell_type denotes neutrophil
T10 974-988 protein denotes beta2 integrin
T11 996-1006 cell_type denotes neutrophil

genia-medco-coref

Id Subject Object Predicate Lexical cue
C1 38-85 NP denotes human neutrophil-mediated tumor cell cytostasis
C2 171-212 NP denotes neutrophil-mediated tumor cell cytostasis
C3 247-266 NP denotes a synthetic hormone
C4 268-287 NP denotes dexamethasone (Dex)
C5 383-386 NP denotes Dex
C6 414-450 NP denotes a glucocorticoid receptor antagonist
C7 452-459 NP denotes RU38486
C9 522-525 NP denotes Dex
C10 552-566 NP denotes beta2 integrin
C11 570-592 NP denotes the neutrophil surface
C8 511-592 NP denotes effects of Dex on the binding avidity of beta2 integrin on the neutrophil surface
C12 601-606 NP denotes these
C13 662-665 NP denotes Dex
C14 720-727 NP denotes RU38486
C15 859-900 NP denotes neutrophil-mediated tumor cell cytostasis
C16 974-988 NP denotes beta2 integrin
C17 992-1014 NP denotes the neutrophil surface
R1 C2 C1 coref-ident neutrophil-mediated tumor cell cytostasis,human neutrophil-mediated tumor cell cytostasis
R2 C4 C3 coref-appos dexamethasone (Dex),a synthetic hormone
R3 C5 C3 coref-ident Dex,a synthetic hormone
R4 C7 C6 coref-appos RU38486,a glucocorticoid receptor antagonist
R5 C9 C5 coref-ident Dex,Dex
R6 C12 C8 coref-pron these,effects of Dex on the binding avidity of beta2 integrin on the neutrophil surface
R7 C13 C9 coref-ident Dex,Dex
R8 C14 C6 coref-ident RU38486,a glucocorticoid receptor antagonist
R9 C15 C2 coref-ident neutrophil-mediated tumor cell cytostasis,neutrophil-mediated tumor cell cytostasis
R10 C16 C10 coref-ident beta2 integrin,beta2 integrin
R11 C17 C11 coref-ident the neutrophil surface,the neutrophil surface

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-86 Sentence denotes Glucocorticoid hormone suppression of human neutrophil-mediated tumor cell cytostasis.
S2 87-368 Sentence denotes In the present study, we have investigated the effect of glucocorticoid hormones on neutrophil-mediated tumor cell cytostasis and found that hydrocortisone and a synthetic hormone, dexamethasone (Dex), inhibited cytostasis in the presence or absence of tumor necrosis factor-alpha.
S3 369-460 Sentence denotes The effect of Dex was completely reversed by a glucocorticoid receptor antagonist, RU38486.
S4 461-661 Sentence denotes To clarify the underlying mechanisms, we examined effects of Dex on the binding avidity of beta2 integrin on the neutrophil surface and how these might in turn affect neutrophil-to-tumor cell binding.
S5 662-779 Sentence denotes Dex was found to inhibit these neutrophil properties, and RU38486 completely suppressed both forms of Dex inhibition.
S6 780-1015 Sentence denotes Taken together, our findings suggest that glucocorticoid hormone inhibition of neutrophil-mediated tumor cell cytostasis is at least partially due to a lowering of the ligand binding avidity of beta2 integrin on the neutrophil surface.

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 0-34 other_name denotes Glucocorticoid hormone suppression
T2 38-43 other_name denotes human
T3 44-54 cell_type denotes neutrophil
T4 144-167 lipid denotes glucocorticoid hormones
T5 171-181 cell_type denotes neutrophil
T6 228-242 lipid denotes hydrocortisone
T7 249-266 lipid denotes synthetic hormone
T8 268-281 lipid denotes dexamethasone
T9 283-286 lipid denotes Dex
T10 340-367 protein_molecule denotes tumor necrosis factor-alpha
T11 383-386 lipid denotes Dex
T12 416-439 protein_family_or_group denotes glucocorticoid receptor
T13 452-459 other_organic_compound denotes RU38486
T14 476-497 other_name denotes underlying mechanisms
T15 522-525 lipid denotes Dex
T16 552-566 protein_molecule denotes beta2 integrin
T17 574-584 cell_type denotes neutrophil
T18 616-627 other_name denotes turn affect
T19 628-638 cell_type denotes neutrophil
T20 662-665 lipid denotes Dex
T21 693-703 cell_type denotes neutrophil
T22 720-727 other_organic_compound denotes RU38486
T23 764-767 lipid denotes Dex
T24 822-855 other_name denotes glucocorticoid hormone inhibition
T25 859-869 cell_type denotes neutrophil
T26 948-970 other_name denotes ligand binding avidity
T27 974-988 protein_molecule denotes beta2 integrin
T28 996-1006 cell_type denotes neutrophil

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 191-196 HP_0002664 denotes tumor
T2 340-345 HP_0002664 denotes tumor
T3 642-647 HP_0002664 denotes tumor
T4 879-884 HP_0002664 denotes tumor