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sentences

Id Subject Object Predicate Lexical cue
T1 0-173 Sentence denotes Bacterial lipopolysaccharide activates nuclear factor-kappaB through interleukin-1 signaling mediators in cultured human dermal endothelial cells and mononuclear phagocytes.
T2 174-400 Sentence denotes Bacterial lipopolysaccharide (LPS)-mediated immune responses, including activation of monocytes, macrophages, and endothelial cells, play an important role in the pathogenesis of Gram-negative bacteria-induced sepsis syndrome.
T3 401-537 Sentence denotes Activation of NF-kappaB is thought to be required for cytokine release from LPS-responsive cells, a critical step for endotoxic effects.
T4 538-771 Sentence denotes Here we investigated the role and involvement of interleukin-1 (IL-1) and tumor necrosis factor (TNF-alpha) signal transducer molecules in LPS signaling in human dermal microvessel endothelial cells (HDMEC) and THP-1 monocytic cells.
T5 772-873 Sentence denotes LPS stimulation of HDMEC and THP-1 cells initiated an IL-1 receptor-like NF-kappaB signaling cascade.
T6 874-1079 Sentence denotes In transient cotransfection experiments, dominant negative mutants of the IL-1 signaling pathway, including MyD88, IRAK, IRAK2, and TRAF6 inhibited both IL-1- and LPS-induced NF-kappaB-luciferase activity.
T7 1080-1204 Sentence denotes LPS-induced NF-kappaB activation was not inhibited by a dominant negative mutant of TRAF2 that is involved in TNF signaling.
T8 1205-1312 Sentence denotes LPS-induced activation of NF-kappaB-responsive reporter gene was not inhibited by IL-1 receptor antagonist.
T9 1313-1387 Sentence denotes TLR2 and TLR4 were expressed on the cell surface of HDMEC and THP-1 cells.
T10 1388-1684 Sentence denotes These findings suggest that a signal transduction molecule in the LPS receptor complex may belong to the IL-1 receptor/toll-like receptor (TLR) super family, and the LPS signaling cascade uses an analogous molecular framework for signaling as IL-1 in mononuclear phagocytes and endothelial cells.

jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 39-60 protein denotes nuclear factor-kappaB
T2 69-102 protein denotes interleukin-1 signaling mediators
T3 106-145 cell_line denotes cultured human dermal endothelial cells
T4 150-172 cell_type denotes mononuclear phagocytes
T5 260-269 cell_type denotes monocytes
T6 271-282 cell_type denotes macrophages
T7 288-305 cell_type denotes endothelial cells
T8 415-424 protein denotes NF-kappaB
T9 477-497 cell_type denotes LPS-responsive cells
T10 587-600 protein denotes interleukin-1
T11 602-606 protein denotes IL-1
T12 612-633 protein denotes tumor necrosis factor
T13 635-644 protein denotes TNF-alpha
T14 646-673 protein denotes signal transducer molecules
T15 694-736 cell_type denotes human dermal microvessel endothelial cells
T16 738-743 cell_type denotes HDMEC
T17 749-770 cell_line denotes THP-1 monocytic cells
T18 791-796 cell_type denotes HDMEC
T19 801-812 cell_line denotes THP-1 cells
T20 826-839 protein denotes IL-1 receptor
T21 845-854 protein denotes NF-kappaB
T22 948-952 protein denotes IL-1
T23 982-987 protein denotes MyD88
T24 989-993 protein denotes IRAK
T25 995-1000 protein denotes IRAK2
T26 1006-1011 protein denotes TRAF6
T27 1027-1031 protein denotes IL-1
T28 1049-1058 protein denotes NF-kappaB
T29 1058-1069 protein denotes -luciferase
T30 1092-1101 protein denotes NF-kappaB
T31 1164-1169 protein denotes TRAF2
T32 1190-1193 protein denotes TNF
T33 1231-1265 DNA denotes NF-kappaB-responsive reporter gene
T34 1287-1291 protein denotes IL-1
T35 1313-1317 protein denotes TLR2
T36 1322-1326 protein denotes TLR4
T37 1365-1370 cell_type denotes HDMEC
T38 1375-1386 cell_line denotes THP-1 cells
T39 1418-1446 protein denotes signal transduction molecule
T40 1493-1497 protein denotes IL-1
T41 1631-1635 protein denotes IL-1
T42 1639-1661 cell_type denotes mononuclear phagocytes
T43 1666-1683 cell_type denotes endothelial cells

genia-medco-coref

Id Subject Object Predicate Lexical cue
C1 39-60 NP denotes nuclear factor-kappaB
C2 150-172 NP denotes mononuclear phagocytes
C3 288-305 NP denotes endothelial cells
C4 415-424 NP denotes NF-kappaB
C5 455-497 NP denotes cytokine release from LPS-responsive cells
C6 499-536 NP denotes a critical step for endotoxic effects
C7 694-770 NP denotes human dermal microvessel endothelial cells (HDMEC) and THP-1 monocytic cells
C8 791-812 NP denotes HDMEC and THP-1 cells
C10 1164-1169 NP denotes TRAF2
C9 1134-1169 NP denotes a dominant negative mutant of TRAF2
C11 1170-1174 NP denotes that
C12 1313-1317 NP denotes TLR2
C13 1365-1386 NP denotes HDMEC and THP-1 cells
C14 1639-1661 NP denotes mononuclear phagocytes
C15 1666-1683 NP denotes endothelial cells
R1 C4 C1 coref-ident NF-kappaB,nuclear factor-kappaB
R2 C6 C5 coref-appos a critical step for endotoxic effects,cytokine release from LPS-responsive cells
R3 C8 C7 coref-ident HDMEC and THP-1 cells,human dermal microvessel endothelial cells (HDMEC) and THP-1 monocytic cells
R4 C11 C9 coref-relat that,a dominant negative mutant of TRAF2
R5 C12 C10 coref-ident TLR2,TRAF2
R6 C13 C8 coref-ident HDMEC and THP-1 cells,HDMEC and THP-1 cells
R7 C14 C2 coref-ident mononuclear phagocytes,mononuclear phagocytes
R8 C15 C3 coref-ident endothelial cells,endothelial cells

semrep-sample

Id Subject Object Predicate Lexical cue
E1-ti-1 0-9 cui:C0521009 denotes Bacterial
E2-ti-1 10-28 cui:C0023810 denotes lipopolysaccharide
E3-ti-1 39-46 cui:C0521447 denotes nuclear
E4-ti-1 47-53 cui:C1521761 denotes factor
E5-ti-1 69-82 cui:C0021753 denotes interleukin-1
E6-ti-1 83-92 cui:C0037083 denotes signaling
E7-ti-1 115-120 cui:C0020114 denotes human
E8-ti-1 106-127 cui:C0450138 denotes cultured human dermal
E9-ti-1 128-145 cui:C0225336 denotes endothelial cells
E10-ti-1 150-161 cui:C1513475 denotes mononuclear
E11-ti-1 162-172 cui:C0031307 denotes phagocytes
T1 106-145 PART_OF denotes cultured human dermal endothelial cells
T2 103-105 LOCATION_OF denotes in
T3 103-105 LOCATION_OF denotes in
E1-ab-1 174-183 cui:C0521009 denotes Bacterial
E2-ab-1 184-202 cui:C0023810 denotes lipopolysaccharide
E3-ab-1 218-224 cui:C0439662 denotes immune
E4-ab-1 209-234 cui:C0870868 denotes mediated immune responses
E5-ab-1 260-269 cui:C0026473 denotes monocytes
E6-ab-1 271-282 cui:C0024432 denotes macrophages
E7-ab-1 288-305 cui:C0225336 denotes endothelial cells
E8-ab-1 325-329 cui:C0035820 denotes role
E9-ab-1 337-349 cui:C0699748 denotes pathogenesis
E10-ab-1 353-375 cui:C0018150 denotes Gram-negative bacteria
E11-ab-1 376-383 cui:C0205263 denotes induced
E12-ab-1 384-399 cui:C0242966 denotes sepsis syndrome
T4 325-329 AFFECTS denotes role
E1-ab-2 415-424 cui:C0079904 denotes NF-kappaB
E2-ab-2 455-463 cui:C0079189 denotes cytokine
E3-ab-2 477-480 cui:C0023810 denotes LPS
E4-ab-2 481-491 cui:C0205342 denotes responsive
E5-ab-2 492-497 cui:C0007634 denotes cells
E6-ab-2 501-509 cui:C1511545 denotes critical
E7-ab-2 510-514 cui:C1261552 denotes step
E8-ab-2 519-528 cui:C0014264 denotes endotoxic
E9-ab-2 529-536 cui:C1280500 denotes effects
T5 472-476 LOCATION_OF denotes from
E1-ab-3 563-567 cui:C0035820 denotes role
E2-ab-3 587-600 cui:C0021755 denotes interleukin-1
E3-ab-3 612-633 cui:C1456820 denotes tumor necrosis factor
E4-ab-3 635-644 cui:C1456820 denotes TNF-alpha
E5-ab-3 653-663 cui:C0040661 denotes transducer
E6-ab-3 664-673 cui:C0567416 denotes molecules
E7-ab-3 677-680 cui:C0023810 denotes LPS
E8-ab-3 681-690 cui:C0037083 denotes signaling
E9-ab-3 700-706 cui:C0221928 denotes dermal
E10-ab-3 719-730 cui:C0669365 denotes endothelial
E11-ab-3 694-736 cui:C0427861 denotes human dermal microvessel endothelial cells
E12-ab-3 749-754 entrez:2736 denotes THP-1
E13-ab-3 755-764 cui:C0026473 denotes monocytic
E14-ab-3 765-770 cui:C0007634 denotes cells
T6 674-676 COEXISTS_WITH denotes in
T7 674-676 COEXISTS_WITH denotes in
E1-ab-4 772-775 cui:C0023810 denotes LPS
E2-ab-4 776-787 cui:C1292856 denotes stimulation
E3-ab-4 791-796 cui:C0221928 denotes HDMEC
E4-ab-4 791-796 cui:C0669365 denotes HDMEC
E5-ab-4 791-796 cui:C0427861 denotes HDMEC
E6-ab-4 801-806 entrez:2736 denotes THP-1
E7-ab-4 807-812 cui:C0007634 denotes cells
E8-ab-4 826-839 cui:C0063710 denotes IL-1 receptor
E9-ab-4 845-854 cui:C0079904 denotes NF-kappaB
E10-ab-4 855-864 cui:C0037083 denotes signaling
E1-ab-5 877-886 cui:C0205374 denotes transient
E2-ab-5 902-913 cui:C0681814 denotes experiments
E3-ab-5 915-940 cui:C1512032 denotes dominant negative mutants
E4-ab-5 948-952 cui:C0021753 denotes IL-1
E5-ab-5 953-970 cui:C0086982 denotes signaling pathway
E6-ab-5 982-987 entrez:4615 denotes MyD88
E7-ab-5 989-993 cui:C1334134 denotes IRAK
E8-ab-5 995-1000 cui:C0663246 denotes IRAK2
E9-ab-5 1006-1011 cui:C0530129 denotes TRAF6
E10-ab-5 1027-1031 cui:C0021755 denotes IL-1
E11-ab-5 1037-1040 cui:C0023810 denotes LPS
E12-ab-5 1041-1048 cui:C0205263 denotes induced
E13-ab-5 1049-1058 cui:C0079904 denotes NF-kappaB
E14-ab-5 1059-1069 cui:C0024075 denotes luciferase
E15-ab-5 1070-1078 cui:C0439167 denotes activity
T8 1012-1021 INHIBITS denotes inhibited
T9 1012-1021 INHIBITS denotes inhibited
E1-ab-6 1080-1083 cui:C0023810 denotes LPS
E2-ab-6 1084-1091 cui:C0205263 denotes induced
E3-ab-6 1092-1101 cui:C0079904 denotes NF-kappaB
E4-ab-6 1117-1120 cui:C1518422 denotes not
E5-ab-6 1136-1160 cui:C1512032 denotes dominant negative mutant
E6-ab-6 1164-1169 cui:C0258441 denotes TRAF2
E7-ab-6 1190-1193 cui:C0812246 denotes TNF
E8-ab-6 1194-1203 cui:C0037083 denotes signaling
T10 1178-1186 ASSOCIATED_WITH denotes involved
E1-ab-7 1205-1208 cui:C0023810 denotes LPS
E2-ab-7 1209-1216 cui:C0205263 denotes induced
E3-ab-7 1231-1240 cui:C0079904 denotes NF-kappaB
E4-ab-7 1241-1251 cui:C0205342 denotes responsive
E5-ab-7 1252-1265 cui:C0206414 denotes reporter gene
E6-ab-7 1270-1273 cui:C1518422 denotes not
E7-ab-7 1287-1311 cui:C0245109 denotes IL-1 receptor antagonist
E1-ab-8 1313-1317 cui:C0754728 denotes TLR2
E2-ab-8 1322-1326 cui:C1336636 denotes TLR4
E3-ab-8 1349-1361 cui:C0699040 denotes cell surface
E4-ab-8 1365-1370 cui:C0221928 denotes HDMEC
E5-ab-8 1365-1370 cui:C0669365 denotes HDMEC
E6-ab-8 1365-1370 cui:C0427861 denotes HDMEC
E7-ab-8 1375-1380 entrez:2736 denotes THP-1
E8-ab-8 1381-1386 cui:C0007634 denotes cells
T11 1342-1344 LOCATION_OF denotes on
T12 1342-1344 LOCATION_OF denotes on
E1-ab-9 1394-1402 cui:C0243095 denotes findings
E2-ab-9 1418-1437 cui:C0037083 denotes signal transduction
E3-ab-9 1438-1446 cui:C0567416 denotes molecule
E4-ab-9 1454-1466 cui:C0108768 denotes LPS receptor
E5-ab-9 1467-1474 cui:C0439855 denotes complex
E6-ab-9 1493-1506 cui:C0063710 denotes IL-1 receptor
E7-ab-9 1507-1511 cui:C1321919 denotes toll
E8-ab-9 1532-1537 cui:C1282910 denotes super
E9-ab-9 1538-1544 cui:C0015576 denotes family
E10-ab-9 1554-1557 cui:C0023810 denotes LPS
E11-ab-9 1558-1567 cui:C0037083 denotes signaling
E12-ab-9 1584-1593 cui:C0243071 denotes analogous
E13-ab-9 1594-1603 cui:C1521991 denotes molecular
E14-ab-9 1618-1627 cui:C0037083 denotes signaling
E15-ab-9 1631-1635 cui:C0021755 denotes IL-1
E16-ab-9 1639-1650 cui:C1513475 denotes mononuclear
E17-ab-9 1651-1661 cui:C0031307 denotes phagocytes
E18-ab-9 1666-1683 cui:C0225336 denotes endothelial cells
T13 1636-1638 LOCATION_OF denotes in
T14 1636-1638 LOCATION_OF denotes in
R1 E9-ti-1 T1 subjectOf endothelial cells,cultured human dermal endothelial cells
R2 E8-ti-1 T1 objectOf cultured human dermal,cultured human dermal endothelial cells
R3 E9-ti-1 T2 subjectOf endothelial cells,in
R4 E2-ti-1 T2 objectOf lipopolysaccharide,in
R5 E11-ti-1 T3 subjectOf phagocytes,in
R6 E2-ti-1 T3 objectOf lipopolysaccharide,in
R7 E12-ab-1 T4 subjectOf sepsis syndrome,role
R8 E9-ab-1 T4 objectOf pathogenesis,role
R9 E5-ab-2 T5 subjectOf cells,from
R10 E1-ab-2 T5 objectOf NF-kappaB,from
R11 E3-ab-3 T6 subjectOf tumor necrosis factor,in
R12 E7-ab-3 T6 objectOf LPS,in
R13 E2-ab-3 T7 subjectOf interleukin-1,in
R14 E7-ab-3 T7 objectOf LPS,in
R15 E9-ab-5 T8 subjectOf TRAF6,inhibited
R16 E10-ab-5 T8 objectOf IL-1,inhibited
R17 E9-ab-5 T9 subjectOf TRAF6,inhibited
R18 E14-ab-5 T9 objectOf luciferase,inhibited
R19 E7-ab-6 T10 subjectOf TNF,involved
R20 E5-ab-6 T10 objectOf dominant negative mutant,involved
R21 E3-ab-8 T11 subjectOf cell surface,on
R22 E2-ab-8 T11 objectOf TLR4,on
R23 E3-ab-8 T12 subjectOf cell surface,on
R24 E1-ab-8 T12 objectOf TLR2,on
R25 E17-ab-9 T13 subjectOf phagocytes,in
R26 E15-ab-9 T13 objectOf IL-1,in
R27 E18-ab-9 T14 subjectOf endothelial cells,in
R28 E15-ab-9 T14 objectOf IL-1,in

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-173 Sentence denotes Bacterial lipopolysaccharide activates nuclear factor-kappaB through interleukin-1 signaling mediators in cultured human dermal endothelial cells and mononuclear phagocytes.
S2 174-400 Sentence denotes Bacterial lipopolysaccharide (LPS)-mediated immune responses, including activation of monocytes, macrophages, and endothelial cells, play an important role in the pathogenesis of Gram-negative bacteria-induced sepsis syndrome.
S3 401-537 Sentence denotes Activation of NF-kappaB is thought to be required for cytokine release from LPS-responsive cells, a critical step for endotoxic effects.
S4 538-771 Sentence denotes Here we investigated the role and involvement of interleukin-1 (IL-1) and tumor necrosis factor (TNF-alpha) signal transducer molecules in LPS signaling in human dermal microvessel endothelial cells (HDMEC) and THP-1 monocytic cells.
S5 772-873 Sentence denotes LPS stimulation of HDMEC and THP-1 cells initiated an IL-1 receptor-like NF-kappaB signaling cascade.
S6 874-1079 Sentence denotes In transient cotransfection experiments, dominant negative mutants of the IL-1 signaling pathway, including MyD88, IRAK, IRAK2, and TRAF6 inhibited both IL-1- and LPS-induced NF-kappaB-luciferase activity.
S7 1080-1204 Sentence denotes LPS-induced NF-kappaB activation was not inhibited by a dominant negative mutant of TRAF2 that is involved in TNF signaling.
S8 1205-1312 Sentence denotes LPS-induced activation of NF-kappaB-responsive reporter gene was not inhibited by IL-1 receptor antagonist.
S9 1313-1387 Sentence denotes TLR2 and TLR4 were expressed on the cell surface of HDMEC and THP-1 cells.
S10 1388-1684 Sentence denotes These findings suggest that a signal transduction molecule in the LPS receptor complex may belong to the IL-1 receptor/toll-like receptor (TLR) super family, and the LPS signaling cascade uses an analogous molecular framework for signaling as IL-1 in mononuclear phagocytes and endothelial cells.

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 10-28 lipid denotes lipopolysaccharide
T2 39-60 protein_complex denotes nuclear factor-kappaB
T3 69-102 protein_family_or_group denotes interleukin-1 signaling mediators
T4 106-145 cell_line denotes cultured human dermal endothelial cells
T5 150-172 cell_type denotes mononuclear phagocytes
T6 184-202 lipid denotes lipopolysaccharide
T7 260-269 cell_type denotes monocytes
T8 271-282 cell_type denotes macrophages
T9 288-305 cell_type denotes endothelial cells
T10 353-375 mono_cell denotes Gram-negative bacteria
T11 415-424 protein_complex denotes NF-kappaB
T12 477-497 cell_type denotes LPS-responsive cells
T13 519-536 other_name denotes endotoxic effects
T14 587-600 protein_molecule denotes interleukin-1
T15 602-606 protein_molecule denotes IL-1
T16 612-633 protein_family_or_group denotes tumor necrosis factor
T17 635-644 protein_molecule denotes TNF-alpha
T18 646-673 protein_family_or_group denotes signal transducer molecules
T19 677-680 lipid denotes LPS
T20 694-718 cell_type denotes human dermal microvessel
T21 719-736 cell_type denotes endothelial cells
T22 738-743 cell_type denotes HDMEC
T23 749-770 cell_line denotes THP-1 monocytic cells
T24 772-775 lipid denotes LPS
T25 791-796 cell_type denotes HDMEC
T26 801-812 cell_line denotes THP-1 cells
T27 826-830 protein_molecule denotes IL-1
T28 845-854 protein_complex denotes NF-kappaB
T29 887-913 other_name denotes cotransfection experiments
T30 948-952 protein_molecule denotes IL-1
T31 982-987 protein_molecule denotes MyD88
T32 989-993 protein_molecule denotes IRAK
T33 995-1000 protein_molecule denotes IRAK2
T34 1006-1011 protein_molecule denotes TRAF6
T35 1027-1031 protein_molecule denotes IL-1
T36 1037-1040 lipid denotes LPS
T37 1049-1058 protein_complex denotes NF-kappaB
T38 1058-1069 protein_molecule denotes -luciferase
T39 1080-1083 lipid denotes LPS
T40 1092-1101 protein_complex denotes NF-kappaB
T41 1164-1169 protein_molecule denotes TRAF2
T42 1190-1193 protein_family_or_group denotes TNF
T43 1205-1208 lipid denotes LPS
T44 1231-1240 protein_complex denotes NF-kappaB
T45 1287-1291 protein_molecule denotes IL-1
T46 1313-1317 protein_molecule denotes TLR2
T47 1322-1326 protein_molecule denotes TLR4
T48 1365-1370 cell_type denotes HDMEC
T49 1375-1386 cell_line denotes THP-1 cells
T50 1418-1446 protein_family_or_group denotes signal transduction molecule
T51 1454-1457 lipid denotes LPS
T52 1493-1497 protein_molecule denotes IL-1
T53 1554-1557 lipid denotes LPS
T54 1584-1613 other_name denotes analogous molecular framework
T55 1631-1635 protein_molecule denotes IL-1
T56 1639-1661 cell_type denotes mononuclear phagocytes
T57 1666-1683 cell_type denotes endothelial cells

metamap-sample

Id Subject Object Predicate Lexical cue
T1 1366-1371 C0086418 denotes DMEC
T2 792-797 C0086418 denotes DMEC
T3 695-700 C0086418 denotes uman
T4 116-121 C0086418 denotes uman
T5 1632-1636 C0021755 denotes L-1
T6 588-601 C0021755 denotes nterleukin-1
T7 70-83 C0021755 denotes nterleukin-1
T8 1555-1558 C0023810 denotes PS
T9 1206-1209 C0023810 denotes PS-
T10 1081-1084 C0023810 denotes PS-
T11 1038-1041 C0023810 denotes PS-
T12 773-776 C0023810 denotes PS
T13 678-681 C0023810 denotes PS
T14 478-481 C0023810 denotes PS-
T15 185-203 C0023810 denotes ipopolysaccharide
T16 11-29 C0023810 denotes ipopolysaccharide
T17 1050-1059 C0079904 denotes F-kappaB-
T18 40-61 C0079904 denotes uclear factor-kappaB
T19 1419-1438 C0037083 denotes ignal transduction
T20 1195-1204 C0037083 denotes ignaling.
T21 856-864 C0037083 denotes ignaling
T22 84-93 C0037083 denotes ignaling
T23 1667-1684 C0225336 denotes ndothelial cells.
T24 1366-1371 C0225336 denotes DMEC
T25 792-797 C0225336 denotes DMEC
T26 720-737 C0225336 denotes ndothelial cells
T27 289-306 C0225336 denotes ndothelial cells,
T28 129-146 C0225336 denotes ndothelial cells
T29 30-39 C1515877 denotes ctivates
T30 1640-1662 C2952444 denotes ononuclear phagocytes
T31 151-173 C2952444 denotes ononuclear phagocytes.
T32 175-184 C0521009 denotes acterial
T33 1-10 C0521009 denotes acterial
T34 210-218 C0127400 denotes ediated
T35 94-103 C0127400 denotes ediators
T36 1494-1507 C0063710 denotes L-1 receptor/
T37 827-840 C0063710 denotes L-1 receptor-
T38 636-645 C1456820 denotes NF-alpha)
T39 613-633 C1456820 denotes umor necrosis factor
T40 1366-1371 C0014257 denotes DMEC
T41 792-797 C0014257 denotes DMEC
T42 720-731 C0014257 denotes ndothelial
T43 1366-1371 C2350570 denotes DMEC
T44 792-797 C2350570 denotes DMEC
T45 708-719 C2350570 denotes icrovessel
T46 756-765 C0026473 denotes onocytic
T47 1253-1266 C0206414 denotes eporter gene
T48 1288-1312 C1704264 denotes L-1 receptor antagonist.
T49 1382-1387 C0007634 denotes ells.
T50 808-813 C0007634 denotes ells
T51 766-771 C0007634 denotes ells.
T52 493-498 C0007634 denotes ells,
T53 272-283 C0024432 denotes acrophages,
T54 1210-1217 C0205263 denotes nduced
T55 1085-1092 C0205263 denotes nduced
T56 1042-1049 C0205263 denotes nduced
T57 377-384 C0205263 denotes nduced
T58 385-400 C0242966 denotes epsis syndrome.
T59 456-464 C0079189 denotes ytokine
T60 954-971 C0086982 denotes ignaling pathway,
T61 429-436 C0039869 denotes hought
T62 1577-1581 C0042153 denotes ses
T63 1218-1241 C1523116 denotes ctivation of NF-kappaB-
T64 402-425 C1523116 denotes ctivation of NF-kappaB
T65 1275-1284 C0311403 denotes nhibited
T66 1122-1131 C0311403 denotes nhibited
T67 1013-1021 C0311403 denotes nhibited
T68 1366-1371 C0427861 denotes DMEC
T69 792-797 C0427861 denotes DMEC
T70 1376-1379 C1705396 denotes HP-
T71 802-805 C1705396 denotes HP-
T72 750-753 C1705396 denotes HP-
T73 1366-1371 C1522447 denotes DMEC
T74 792-797 C1522447 denotes DMEC
T75 701-706 C1522447 denotes ermal
T76 973-982 C0332257 denotes ncluding
T77 237-245 C0332257 denotes ncluding
T78 1271-1274 C1518422 denotes ot
T79 1118-1121 C1518422 denotes ot
T80 1539-1545 C0015576 denotes amily,
T81 654-664 C0040661 denotes ransducer
T82 564-568 C1705810 denotes ole
T83 326-330 C1705810 denotes ole
T84 1508-1512 C1336636 denotes oll-
T85 1323-1327 C1336636 denotes LR4
T86 1137-1161 C1512032 denotes ominant negative mutant
T87 916-941 C1512032 denotes ominant negative mutants
T88 1179-1187 C1314939 denotes nvolved
T89 573-584 C1314939 denotes nvolvement
T90 1242-1251 C0205342 denotes esponsive
T91 482-492 C0205342 denotes esponsive
T92 354-376 C0018150 denotes ram-negative bacteria-
T93 308-312 C0600138 denotes lay
T94 990-994 C1334134 denotes RAK,
T95 996-1001 C1334135 denotes RAK2,
T96 547-558 C1292732 denotes nvestigated
T97 983-988 C1417530 denotes yD88,
T98 1007-1012 C1336666 denotes RAF6
T99 437-439 C1883351 denotes o
T100 1395-1403 C2607943 denotes indings
T101 1404-1410 C1705535 denotes uggest
T102 814-823 C1704686 denotes nitiated
T103 219-235 C0301872 denotes mmune responses,
T104 1060-1079 C1151115 denotes uciferase activity.
T105 903-914 C0681814 denotes xperiments,
T106 219-225 C0439662 denotes mmune
T107 1350-1365 C0699040 denotes ell surface of
T108 465-472 C0439180 denotes elease
T109 443-451 C1514873 denotes equired
T110 511-515 C1261552 denotes tep
T111 777-788 C1292856 denotes timulation
T112 1165-1170 C1366777 denotes RAF2
T113 1439-1447 C0567416 denotes olecule
T114 878-887 C0205374 denotes ransient
T115 1455-1475 C1167326 denotes PS receptor complex
T116 502-510 C1511545 denotes ritical
T117 530-537 C1280500 denotes ffects.
T118 338-350 C0699748 denotes athogenesis
T119 647-653 C1710082 denotes ignal

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 384-390 HP_0100806 denotes sepsis
T2 612-617 HP_0002664 denotes tumor

HP-phenotype

Id Subject Object Predicate Lexical cue hp_id
T1 384-390 Phenotype denotes sepsis HP:0100806
T2 612-617 Phenotype denotes tumor HP:0002664

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 612-617 Disease denotes tumor http://purl.obolibrary.org/obo/MONDO_0005070

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 115-120 OrganismTaxon denotes human 9606
T2 367-375 OrganismTaxon denotes bacteria 2|629395
T4 384-390 OrganismTaxon denotes sepsis 137507
T5 694-699 OrganismTaxon denotes human 9606

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 128-145 Body_part denotes endothelial cells http://purl.obolibrary.org/obo/CL_0000115
T2 162-172 Body_part denotes phagocytes http://purl.obolibrary.org/obo/CL_0000234
T3 260-269 Body_part denotes monocytes http://purl.obolibrary.org/obo/CL_0000576|http://purl.obolibrary.org/obo/CL_0001054
T5 271-282 Body_part denotes macrophages http://purl.obolibrary.org/obo/CL_0000235
T6 288-305 Body_part denotes endothelial cells http://purl.obolibrary.org/obo/CL_0000115
T7 707-718 Body_part denotes microvessel http://purl.obolibrary.org/obo/UBERON_8410081
T8 719-736 Body_part denotes endothelial cells http://purl.obolibrary.org/obo/CL_0000115
T9 1651-1661 Body_part denotes phagocytes http://purl.obolibrary.org/obo/CL_0000234
T10 1666-1683 Body_part denotes endothelial cells http://purl.obolibrary.org/obo/CL_0000115

CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 128-145 Cell denotes endothelial cells http://purl.obolibrary.org/obo/CL:0000115
T2 150-172 Cell denotes mononuclear phagocytes http://purl.obolibrary.org/obo/CL:0000113
T3 260-269 Cell denotes monocytes http://purl.obolibrary.org/obo/CL:0000576|http://purl.obolibrary.org/obo/CL:0001054
T5 271-282 Cell denotes macrophages http://purl.obolibrary.org/obo/CL:0000235|http://purl.obolibrary.org/obo/CL:0000394
T7 288-305 Cell denotes endothelial cells http://purl.obolibrary.org/obo/CL:0000115
T8 719-736 Cell denotes endothelial cells http://purl.obolibrary.org/obo/CL:0000115
T9 755-764 Cell denotes monocytic http://purl.obolibrary.org/obo/CL:0000576|http://purl.obolibrary.org/obo/CL:0001054
T11 1639-1661 Cell denotes mononuclear phagocytes http://purl.obolibrary.org/obo/CL:0000113
T12 1666-1683 Cell denotes endothelial cells http://purl.obolibrary.org/obo/CL:0000115