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PubMed:10072068 JSONTXT

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jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 0-5 DNA denotes RFX-B
T2 92-104 protein denotes MHC class II
T3 193-205 protein denotes MHC class II
T4 382-415 protein denotes MHC class II transcription factor
T5 416-419 protein denotes RFX
T6 442-453 protein denotes RFX complex
T7 556-561 DNA denotes RFX-B
T8 563-568 DNA denotes RFX-B
T9 597-622 protein denotes BLS complementation group
T10 624-631 protein denotes group B
T11 663-673 cell_line denotes cell lines
T12 720-738 protein denotes DNA-binding domain

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
10072068-0#0#5#gene8625 0-5 gene8625 denotes RFX-B
10072068-0#63#87#diseaseC0242583 63-87 diseaseC0242583 denotes bare lymphocyte syndrome
10072068-0#63#87#diseaseC2931418 63-87 diseaseC2931418 denotes bare lymphocyte syndrome
10072068-1#70#73#gene3107 193-196 gene3107 denotes MHC
10072068-1#4#28#diseaseC2931418 127-151 diseaseC2931418 denotes bare lymphocyte syndrome
10072068-1#30#33#diseaseC2931418 153-156 diseaseC2931418 denotes BLS
0#5#gene862563#87#diseaseC0242583 10072068-0#0#5#gene8625 10072068-0#63#87#diseaseC0242583 associated_with RFX-B,bare lymphocyte syndrome
0#5#gene862563#87#diseaseC2931418 10072068-0#0#5#gene8625 10072068-0#63#87#diseaseC2931418 associated_with RFX-B,bare lymphocyte syndrome
70#73#gene31074#28#diseaseC2931418 10072068-1#70#73#gene3107 10072068-1#4#28#diseaseC2931418 associated_with MHC,bare lymphocyte syndrome
70#73#gene310730#33#diseaseC2931418 10072068-1#70#73#gene3107 10072068-1#30#33#diseaseC2931418 associated_with MHC,BLS

genia-medco-coref

Id Subject Object Predicate Lexical cue
C1 0-5 NP denotes RFX-B
C2 59-87 NP denotes the bare lymphocyte syndrome
C3 89-121 NP denotes an MHC class II immunodeficiency
C4 123-157 NP denotes The bare lymphocyte syndrome (BLS)
C5 438-453 NP denotes the RFX complex
C6 468-471 NP denotes its
C7 535-547 NP denotes a novel gene
C8 556-561 NP denotes RFX-B
C9 563-568 NP denotes RFX-B
C10 581-632 NP denotes the predominant BLS complementation group (group B)
C11 679-693 NP denotes this BLS group
C12 756-777 NP denotes three ankyrin repeats
C13 778-782 NP denotes that
R1 C3 C2 coref-appos an MHC class II immunodeficiency,the bare lymphocyte syndrome
R2 C4 C2 coref-ident The bare lymphocyte syndrome (BLS),the bare lymphocyte syndrome
R3 C6 C5 coref-pron its,the RFX complex
R4 C7 C1 coref-ident a novel gene,RFX-B
R5 C8 C7 coref-ident RFX-B,a novel gene
R6 C9 C8 coref-ident RFX-B,RFX-B
R7 C11 C10 coref-ident this BLS group,the predominant BLS complementation group (group B)
R8 C13 C12 coref-relat that,three ankyrin repeats

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-122 Sentence denotes RFX-B is the gene responsible for the most common cause of the bare lymphocyte syndrome, an MHC class II immunodeficiency.
S2 123-292 Sentence denotes The bare lymphocyte syndrome (BLS) is characterized by the absence of MHC class II transcription and humoral- and cellular-mediated immune responses to foreign antigens.
S3 293-420 Sentence denotes Three of the four BLS genetic complementation groups have defects in the activity of the MHC class II transcription factor RFX.
S4 421-487 Sentence denotes We have purified the RFX complex and sequenced its three subunits.
S5 488-562 Sentence denotes The sequence of the smallest subunit describes a novel gene, termed RFX-B.
S6 563-694 Sentence denotes RFX-B complements the predominant BLS complementation group (group B) and was found to be mutant in cell lines from this BLS group.
S7 695-842 Sentence denotes The protein has no known DNA-binding domain but does contain three ankyrin repeats that are likely to be important in protein-protein interactions.

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 0-5 DNA_domain_or_region denotes RFX-B
T2 63-87 other_name denotes bare lymphocyte syndrome
T3 92-104 protein_family_or_group denotes MHC class II
T4 127-151 other_name denotes bare lymphocyte syndrome
T5 153-156 other_name denotes BLS
T6 193-205 protein_family_or_group denotes MHC class II
T7 311-314 other_name denotes BLS
T8 382-415 protein_family_or_group denotes MHC class II transcription factor
T9 416-419 protein_molecule denotes RFX
T10 442-445 protein_molecule denotes RFX
T11 556-561 DNA_domain_or_region denotes RFX-B
T12 563-568 DNA_domain_or_region denotes RFX-B
T13 597-600 other_name denotes BLS
T14 624-631 protein_family_or_group denotes group B
T15 663-673 cell_line denotes cell lines
T16 684-687 other_name denotes BLS
T17 720-738 protein_domain_or_region denotes DNA-binding domain
T18 813-841 other_name denotes protein-protein interactions

DisGeNET

Id Subject Object Predicate Lexical cue
T0 563-568 gene:8625 denotes RFX-B
T1 597-600 disease:C0242583 denotes BLS
T2 563-568 gene:8625 denotes RFX-B
T3 597-600 disease:C2931418 denotes BLS
T4 563-568 gene:8625 denotes RFX-B
T5 684-687 disease:C0242583 denotes BLS
T6 563-568 gene:8625 denotes RFX-B
T7 684-687 disease:C2931418 denotes BLS
R1 T0 T1 associated_with RFX-B,BLS
R2 T2 T3 associated_with RFX-B,BLS
R3 T4 T5 associated_with RFX-B,BLS
R4 T6 T7 associated_with RFX-B,BLS