> top > docs > PubMed:10026212 > annotations

PubMed:10026212 JSONTXT

Annnotations TAB JSON ListView MergeView

sentences

Id Subject Object Predicate Lexical cue
T1 0-71 Sentence denotes Human geranylgeranyl diphosphate synthase. cDNA cloning and expression.
T2 72-309 Sentence denotes Geranylgeranyl diphosphate (GGPP) synthase (GGPPSase) catalyzes the synthesis of GGPP, which is an important molecule responsible for the C20-prenylated protein biosynthesis and for the regulation of a nuclear hormone receptor (LXR.RXR).
T3 310-472 Sentence denotes The human GGPPSase cDNA encodes a protein of 300 amino acids which shows 16% sequence identity with the known human farnesyl diphosphate (FPP) synthase (FPPSase).
T4 473-600 Sentence denotes The GGPPSase expressed in Escherichia coli catalyzes the GGPP formation (240 nmol/min/mg) from FPP and isopentenyl diphosphate.
T5 601-825 Sentence denotes The human GGPPSase behaves as an oligomeric molecule with 280 kDa on a gel filtration column and cross-reacts with an antibody directed against bovine brain GGPPSase, which differs immunochemically from bovine brain FPPSase.
T6 826-897 Sentence denotes Northern blot analysis indicates the presence of two forms of the mRNA.

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 752-757 http://purl.obolibrary.org/obo/MAT_0000098 denotes brain
T2 811-816 http://purl.obolibrary.org/obo/MAT_0000098 denotes brain

bionlp-st-gro-2013-training

Id Subject Object Predicate Lexical cue
T1 0-5 Eukaryote denotes Human
T2 6-41 Enzyme denotes geranylgeranyl diphosphate synthase
T3 43-47 DNA denotes cDNA
T8 116-124 Enzyme denotes GGPPSase
T10 153-157 Chemical denotes GGPP
T11 210-232 Protein denotes C20-prenylated protein
T14 274-281 CellComponent denotes nuclear
T15 282-298 Protein denotes hormone receptor
T16 314-319 Eukaryote denotes human
T17 320-328 Enzyme denotes GGPPSase
T18 329-333 DNA denotes cDNA
T19 344-351 Protein denotes protein
T20 359-370 AminoAcid denotes amino acids
T21 420-425 Eukaryote denotes human
T25 463-470 Enzyme denotes FPPSase
T26 477-485 Enzyme denotes GGPPSase
T28 499-515 Eukaryote denotes Escherichia coli
T29 530-534 Chemical denotes GGPP
T30 568-571 Chemical denotes FPP
T31 576-599 Chemical denotes isopentenyl diphosphate
T32 605-610 Eukaryote denotes human
T33 611-619 Enzyme denotes GGPPSase
T34 745-751 Eukaryote denotes bovine
T35 752-757 Tissue denotes brain
T36 758-766 Enzyme denotes GGPPSase
T37 804-810 Eukaryote denotes bovine
T38 811-816 Tissue denotes brain
T39 817-824 Enzyme denotes FPPSase
T40 892-896 MessengerRNA denotes mRNA
T6 126-135 CatalyticActivity denotes catalyzes
T23 516-525 CatalyticActivity denotes catalyzes
E1 60-70 GeneExpression denotes expression
E2 140-149 MetabolicPathway denotes synthesis
E3 233-245 ProteinBiosynthesis denotes biosynthesis
E4 258-268 RegulatoryProcess denotes regulation
E5 486-495 GeneExpression denotes expressed
E6 535-544 MetabolicPathway denotes formation
E7 535-544 MetabolicPathway denotes formation
E8 535-544 MetabolicPathway denotes formation
R1 T2 T1 fromSpecies geranylgeranyl diphosphate synthase,Human
R2 T3 T2 encodes cDNA,geranylgeranyl diphosphate synthase
R3 T15 T14 locatedIn hormone receptor,nuclear
R4 T17 T16 fromSpecies GGPPSase,human
R5 T18 T17 encodes cDNA,GGPPSase
R9 E5 T28 fromSpecies expressed,Escherichia coli
R10 T33 T32 fromSpecies GGPPSase,human
R11 T35 T34 fromSpecies brain,bovine
R12 T36 T35 locatedIn GGPPSase,brain
R13 T38 T37 fromSpecies brain,bovine
R14 T39 T38 locatedIn FPPSase,brain
R7 T26 T23 hasFunction GGPPSase,catalyzes
R8 T8 T6 hasFunction GGPPSase,catalyzes
R15 T25 T21 fromSpecies FPPSase,human
R17 T2 E1 hasPatient geranylgeranyl diphosphate synthase,expression
R18 T6 E2 hasAgent catalyzes,synthesis
R19 T10 E2 hasPatient GGPP,synthesis
R20 T11 E3 hasPatient C20-prenylated protein,biosynthesis
R21 T15 E4 hasPatient hormone receptor,regulation
R22 T26 E5 hasPatient GGPPSase,expressed
R23 T23 E6 hasAgent catalyzes,formation
R24 T29 E6 hasPatient GGPP,formation
R25 T23 E7 hasAgent catalyzes,formation
R26 T30 E7 hasPatient FPP,formation
R27 T23 E8 hasAgent catalyzes,formation
R28 T31 E8 hasPatient isopentenyl diphosphate,formation

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 752-757 Body_part denotes brain http://purl.obolibrary.org/obo/MAT_0000098
T2 811-816 Body_part denotes brain http://purl.obolibrary.org/obo/MAT_0000098

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 0-5 OrganismTaxon denotes Human 9606
T2 314-319 OrganismTaxon denotes human 9606
T3 420-425 OrganismTaxon denotes human 9606
T4 499-515 OrganismTaxon denotes Escherichia coli 562
T5 605-610 OrganismTaxon denotes human 9606
T6 745-751 OrganismTaxon denotes bovine 9913
T7 804-810 OrganismTaxon denotes bovine 9913

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 752-757 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636
T3 811-816 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636