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PMC:88885 / 6435-6717 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T4431 10-17 NN denotes Peptide
T4432 18-26 NN denotes sequence
T4433 27-37 NN denotes comparison
T4434 38-40 IN denotes of
T4435 41-47 NN denotes Mcoln1
T4436 48-50 IN denotes to
T4437 51-56 JJ denotes human
T4438 98-108 NNS denotes homologues
T4439 56-58 , denotes ,
T4440 58-60 NNP denotes D.
T4441 61-73 NNP denotes melanogaster
T4442 73-75 , denotes ,
T4443 75-78 CC denotes and
T4444 79-81 NNP denotes C.
T4445 82-89 NNP denotes elegans
T4446 90-91 -LRB- denotes (
T4447 91-94 NN denotes cup
T4448 95-96 NN denotes 5
T4449 94-95 HYPH denotes -
T4450 96-97 -RRB- denotes )
T4451 108-109 . denotes .
T4452 109-282 sentence denotes Blue lines indicate transmembrane domains, the red box surrounds the putative channel pore, the orange box surrounds the putative late endosomal/lysosomal targeting signal.
T4453 110-114 JJ denotes Blue
T4454 115-120 NNS denotes lines
T4455 121-129 VBP denotes indicate
T4456 217-226 VBZ denotes surrounds
T4457 130-143 NN denotes transmembrane
T4458 144-151 NNS denotes domains
T4459 151-153 , denotes ,
T4460 153-156 DT denotes the
T4461 161-164 NN denotes box
T4462 157-160 JJ denotes red
T4463 165-174 VBZ denotes surrounds
T4464 175-178 DT denotes the
T4465 196-200 NN denotes pore
T4466 179-187 JJ denotes putative
T4467 188-195 NN denotes channel
T4468 200-202 , denotes ,
T4469 202-205 DT denotes the
T4470 213-216 NN denotes box
T4471 206-212 NN denotes orange
T4472 227-230 DT denotes the
T4473 275-281 NN denotes signal
T4474 231-239 JJ denotes putative
T4475 240-244 JJ denotes late
T4476 265-274 NN denotes targeting
T4477 245-254 JJ denotes endosomal
T4478 255-264 JJ denotes lysosomal
T4479 254-255 HYPH denotes /
T4480 281-282 . denotes .
R2761 T4431 T4432 compound Peptide,sequence
R2762 T4432 T4433 compound sequence,comparison
R2763 T4434 T4433 prep of,comparison
R2764 T4435 T4434 pobj Mcoln1,of
R2765 T4436 T4433 prep to,comparison
R2766 T4437 T4438 nmod human,homologues
R2767 T4438 T4436 pobj homologues,to
R2768 T4439 T4437 punct ", ",human
R2769 T4440 T4441 compound D.,melanogaster
R2770 T4441 T4437 conj melanogaster,human
R2771 T4442 T4441 punct ", ",melanogaster
R2772 T4443 T4441 cc and,melanogaster
R2773 T4444 T4445 compound C.,elegans
R2774 T4445 T4441 conj elegans,melanogaster
R2775 T4446 T4445 punct (,elegans
R2776 T4447 T4448 compound cup,5
R2777 T4448 T4445 appos 5,elegans
R2778 T4449 T4448 punct -,5
R2779 T4450 T4438 punct ),homologues
R2780 T4451 T4433 punct .,comparison
R2781 T4453 T4454 amod Blue,lines
R2782 T4454 T4455 nsubj lines,indicate
R2783 T4455 T4456 ccomp indicate,surrounds
R2784 T4457 T4458 compound transmembrane,domains
R2785 T4458 T4455 dobj domains,indicate
R2786 T4459 T4456 punct ", ",surrounds
R2787 T4460 T4461 det the,box
R2788 T4461 T4463 nsubj box,surrounds
R2789 T4462 T4461 amod red,box
R2790 T4463 T4456 ccomp surrounds,surrounds
R2791 T4464 T4465 det the,pore
R2792 T4465 T4463 dobj pore,surrounds
R2793 T4466 T4465 amod putative,pore
R2794 T4467 T4465 compound channel,pore
R2795 T4468 T4456 punct ", ",surrounds
R2796 T4469 T4470 det the,box
R2797 T4470 T4456 nsubj box,surrounds
R2798 T4471 T4470 compound orange,box
R2799 T4472 T4473 det the,signal
R2800 T4473 T4456 dobj signal,surrounds
R2801 T4474 T4473 amod putative,signal
R2802 T4475 T4476 amod late,targeting
R2803 T4476 T4473 compound targeting,signal
R2804 T4477 T4478 amod endosomal,lysosomal
R2805 T4478 T4476 amod lysosomal,targeting
R2806 T4479 T4478 punct /,lysosomal
R2807 T4480 T4456 punct .,surrounds

craft-ca-core-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T4418 41-47 PR:000010252 denotes Mcoln1
T4419 51-56 NCBITaxon:9606 denotes human
T4420 58-73 NCBITaxon:7227 denotes D. melanogaster
T4421 79-89 NCBITaxon:6239 denotes C. elegans
T4422 91-96 PR:000010252 denotes cup-5
T4423 98-108 SO:0000853 denotes homologues
T4424 135-143 GO:0016020 denotes membrane
T4425 144-151 SO:0000417 denotes domains
T4426 240-254 GO:0005770 denotes late endosomal
T4428 245-254,265-281 SO:0001529 denotes endosomal targeting signal
T4429 255-264 GO:0005764 denotes lysosomal
T4430 255-281 SO:0001530 denotes lysosomal targeting signal

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T4481 10-17 CHEBI_SO_EXT:peptide_or_peptide_region denotes Peptide
T4482 18-26 SO_EXT:biological_sequence denotes sequence
T4483 41-47 PR_EXT:000010252 denotes Mcoln1
T4484 51-56 NCBITaxon:9606 denotes human
T4485 58-73 NCBITaxon:7227 denotes D. melanogaster
T4486 79-89 NCBITaxon:6239 denotes C. elegans
T4487 91-96 PR_EXT:000010252 denotes cup-5
T4488 98-108 SO_EXT:0000853 denotes homologues
T4489 135-143 GO:0016020 denotes membrane
T4490 144-151 SO_EXT:0000417 denotes domains
T4491 188-200 GO_EXT:0015267 denotes channel pore
T4492 240-254 GO:0005770 denotes late endosomal
T4494 245-254,265-281 SO_EXT:0001529 denotes endosomal targeting signal
T4495 255-264 GO:0005764 denotes lysosomal
T4496 255-281 SO_EXT:0001530 denotes lysosomal targeting signal
T4497 265-274 GO_EXT:biological_routing_or_transport denotes targeting