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PMC:88885 / 319-735 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T160 11-21 VBN denotes identified
T166 0-2 , denotes ,
T167 2-5 VBZ denotes has
T168 6-10 VBN denotes been
T169 22-24 IN denotes as
T170 25-26 DT denotes a
T171 31-37 NN denotes member
T172 27-30 JJ denotes new
T173 38-40 IN denotes of
T174 41-44 DT denotes the
T175 95-106 NN denotes superfamily
T176 45-54 JJ denotes transient
T177 64-73 NN denotes potential
T178 55-63 NN denotes receptor
T179 74-75 -LRB- denotes (
T180 75-78 NN denotes TRP
T181 78-79 -RRB- denotes )
T182 80-86 NN denotes cation
T183 87-94 NN denotes channel
T184 106-107 . denotes .
T185 107-249 sentence denotes Here we report the cloning and characterization of the mouse homologue, Mcoln1, and report a novel splice variant that is not seen in humans.
T186 108-112 RB denotes Here
T187 116-122 VBP denotes report
T188 113-115 PRP denotes we
T189 123-126 DT denotes the
T190 127-134 NN denotes cloning
T191 135-138 CC denotes and
T192 139-155 NN denotes characterization
T193 156-158 IN denotes of
T194 159-162 DT denotes the
T195 169-178 NN denotes homologue
T196 163-168 NN denotes mouse
T197 178-180 , denotes ,
T198 180-186 NN denotes Mcoln1
T199 186-188 , denotes ,
T200 188-191 CC denotes and
T201 192-198 VBP denotes report
T202 199-200 DT denotes a
T203 214-221 NN denotes variant
T204 201-206 JJ denotes novel
T205 207-213 NN denotes splice
T206 222-226 WDT denotes that
T207 234-238 VBN denotes seen
T208 227-229 VBZ denotes is
T209 230-233 RB denotes not
T210 239-241 IN denotes in
T211 242-248 NNS denotes humans
T212 248-249 . denotes .
T213 249-258 sentence denotes Results
T214 251-258 NNS denotes Results
T215 258-318 sentence denotes The human and mouse genes display a high degree of synteny.
T216 259-262 DT denotes The
T217 279-284 NNS denotes genes
T218 263-268 JJ denotes human
T219 273-278 NN denotes mouse
T220 269-272 CC denotes and
T221 285-292 VBP denotes display
T222 293-294 DT denotes a
T223 300-306 NN denotes degree
T224 295-299 JJ denotes high
T225 307-309 IN denotes of
T226 310-317 NN denotes synteny
T227 317-318 . denotes .
T228 318-385 sentence denotes Mcoln1 shows 91% amino acid and 86% nucleotide identity to MCOLN1.
T229 319-325 NN denotes Mcoln1
T230 326-331 VBZ denotes shows
T231 332-334 CD denotes 91
T232 334-335 NN denotes %
T233 342-346 NN denotes acid
T234 336-341 NN denotes amino
T235 366-374 NN denotes identity
T236 347-350 CC denotes and
T237 351-353 CD denotes 86
T238 353-354 NN denotes %
T239 355-365 NN denotes nucleotide
T240 375-377 IN denotes to
T241 378-384 NN denotes MCOLN1
T242 384-385 . denotes .
T244 386-390 RB denotes Also
T245 399-403 VBZ denotes maps
T246 390-392 , denotes ,
T247 392-398 NN denotes Mcoln1
T248 404-406 IN denotes to
R46 T166 T160 punct ", ",identified
R47 T167 T160 aux has,identified
R48 T168 T160 auxpass been,identified
R49 T169 T160 prep as,identified
R50 T170 T171 det a,member
R51 T171 T169 pobj member,as
R52 T172 T171 amod new,member
R53 T173 T171 prep of,member
R54 T174 T175 det the,superfamily
R55 T175 T173 pobj superfamily,of
R56 T176 T177 amod transient,potential
R57 T177 T175 nmod potential,superfamily
R58 T178 T177 nmod receptor,potential
R59 T179 T177 punct (,potential
R60 T180 T177 appos TRP,potential
R61 T181 T175 punct ),superfamily
R62 T182 T183 compound cation,channel
R63 T183 T175 compound channel,superfamily
R64 T184 T160 punct .,identified
R65 T186 T187 advmod Here,report
R66 T188 T187 nsubj we,report
R67 T189 T190 det the,cloning
R68 T190 T187 dobj cloning,report
R69 T191 T190 cc and,cloning
R70 T192 T190 conj characterization,cloning
R71 T193 T190 prep of,cloning
R72 T194 T195 det the,homologue
R73 T195 T193 pobj homologue,of
R74 T196 T195 compound mouse,homologue
R75 T197 T195 punct ", ",homologue
R76 T198 T195 appos Mcoln1,homologue
R77 T199 T187 punct ", ",report
R78 T200 T187 cc and,report
R79 T201 T187 conj report,report
R80 T202 T203 det a,variant
R81 T203 T201 dobj variant,report
R82 T204 T203 amod novel,variant
R83 T205 T203 compound splice,variant
R84 T206 T207 dep that,seen
R85 T207 T203 relcl seen,variant
R86 T208 T207 auxpass is,seen
R87 T209 T207 neg not,seen
R88 T210 T207 prep in,seen
R89 T211 T210 pobj humans,in
R90 T212 T187 punct .,report
R91 T216 T217 det The,genes
R93 T218 T219 amod human,mouse
R94 T219 T217 compound mouse,genes
R95 T220 T219 cc and,mouse
R96 T222 T223 det a,degree
R97 T223 T221 dobj degree,display
R98 T224 T223 amod high,degree
R99 T225 T223 prep of,degree
R100 T226 T225 pobj synteny,of
R101 T227 T221 punct .,display
R102 T229 T230 nsubj Mcoln1,shows
R103 T231 T232 nummod 91,%
R104 T232 T233 nmod %,acid
R105 T233 T235 nmod acid,identity
R106 T234 T233 nmod amino,acid
R107 T235 T230 dobj identity,shows
R108 T236 T233 cc and,acid
R109 T237 T238 nummod 86,%
R110 T238 T239 compound %,nucleotide
R111 T239 T233 conj nucleotide,acid
R112 T240 T235 prep to,identity
R113 T241 T240 pobj MCOLN1,to
R114 T242 T230 punct .,shows
R115 T244 T245 advmod Also,maps
R116 T246 T245 punct ", ",maps
R117 T247 T245 nsubj Mcoln1,maps
R118 T248 T245 prep to,maps
R92 T217 T221 nsubj genes,display

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T74 45-73 _FRAGMENT denotes transient receptor potential
T75 80-94 PR:000000681 denotes cation channel
T76 75-78 _FRAGMENT denotes TRP
T77 80-86 CHEBI:36916 denotes cation
T78 163-168 NCBITaxon:10088 denotes mouse
T79 169-178 SO:0000853 denotes homologue
T80 180-186 PR:000010252 denotes Mcoln1
T81 207-213 GO:0008380 denotes splice
T82 242-248 NCBITaxon:9606 denotes humans
T83 263-268 NCBITaxon:9606 denotes human
T84 273-278 NCBITaxon:10088 denotes mouse
T85 279-284 SO:0000704 denotes genes
T86 310-317 SO:0000860 denotes synteny
T87 319-325 PR:000010252 denotes Mcoln1
T88 378-384 PR:000010252 denotes MCOLN1
T89 392-398 PR:000010252 denotes Mcoln1
R1 T75 T74 _lexicallyChainedTo cation channel,transient receptor potential
R2 T75 T76 _lexicallyChainedTo cation channel,TRP

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T420 45-73 _FRAGMENT denotes transient receptor potential
T421 80-94 PR_EXT:000000681 denotes cation channel
T422 55-63 GO_EXT:0004872 denotes receptor
T423 75-78 _FRAGMENT denotes TRP
T424 80-86 CHEBI:36916 denotes cation
T425 80-94 GO_EXT:0005261 denotes cation channel
T426 127-134 SO_EXT:sequence_cloning_process denotes cloning
T427 163-168 NCBITaxon:10088 denotes mouse
T428 169-178 SO_EXT:0000853 denotes homologue
T429 180-186 PR_EXT:000010252 denotes Mcoln1
T430 207-213 GO:0008380 denotes splice
T431 207-221 SO_EXT:alternative_splice_variant denotes splice variant
T432 242-248 NCBITaxon:9606 denotes humans
T433 263-268 NCBITaxon:9606 denotes human
T434 273-278 NCBITaxon:10088 denotes mouse
T435 279-284 SO_EXT:0000704 denotes genes
T436 310-317 SO:0000860 denotes synteny
T437 319-325 PR_EXT:000010252 denotes Mcoln1
T438 336-346 CHEBI_SO_EXT:amino_acid denotes amino acid
T439 355-365 CHEBI_SO_EXT:nucleotide denotes nucleotide
T440 378-384 PR_EXT:000010252 denotes MCOLN1
T441 392-398 PR_EXT:000010252 denotes Mcoln1
R265 T421 T420 _lexicallyChainedTo cation channel,transient receptor potential
R266 T421 T423 _lexicallyChainedTo cation channel,TRP