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PMC:88885 / 1608-3399 JSONTXT

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Id Subject Object Predicate Lexical cue
T560 11-24 NN denotes Mucolipidosis
T561 25-29 NN denotes type
T562 52-54 VBZ denotes is
T563 30-32 CD denotes IV
T564 33-34 -LRB- denotes (
T565 34-38 NN denotes MLIV
T566 38-39 : denotes ;
T567 40-43 NN denotes MIM
T568 44-50 CD denotes 252650
T569 50-51 -RRB- denotes )
T570 55-57 DT denotes an
T571 96-104 NN denotes disorder
T572 58-67 JJ denotes autosomal
T573 68-77 JJ denotes recessive
T574 78-87 JJ denotes lysosomal
T575 88-95 NN denotes storage
T576 105-109 WDT denotes that
T577 113-126 VBN denotes characterized
T578 110-112 VBZ denotes is
T579 127-129 IN denotes by
T580 130-137 JJ denotes corneal
T581 138-146 NN denotes clouding
T582 146-148 , denotes ,
T583 148-155 JJ denotes delayed
T584 168-179 NN denotes development
T585 156-167 NN denotes psychomotor
T586 179-181 , denotes ,
T587 181-184 CC denotes and
T588 185-191 JJ denotes mental
T589 192-203 NN denotes retardation
T590 204-208 WDT denotes that
T591 217-225 VBZ denotes presents
T592 209-216 RB denotes usually
T593 226-232 IN denotes during
T594 233-236 DT denotes the
T595 243-247 NN denotes year
T596 237-242 JJ denotes first
T597 248-250 IN denotes of
T598 251-255 NN denotes life
T599 256-257 -LRB- denotes [
T600 257-258 CD denotes 1
T601 258-259 -RRB- denotes ]
T602 259-260 . denotes .
T603 260-389 sentence denotes Another interesting clinical characteristic is that patients are constitutively achlorhydric with associated hypergastremia [2].
T604 261-268 DT denotes Another
T605 290-304 NN denotes characteristic
T606 269-280 JJ denotes interesting
T607 281-289 JJ denotes clinical
T608 305-307 VBZ denotes is
T609 308-312 IN denotes that
T610 322-325 VBP denotes are
T611 313-321 NNS denotes patients
T612 326-340 RB denotes constitutively
T613 341-353 JJ denotes achlorhydric
T614 354-358 IN denotes with
T615 359-369 VBN denotes associated
T616 370-384 NN denotes hypergastremia
T617 385-386 -LRB- denotes [
T618 386-387 CD denotes 2
T619 387-388 -RRB- denotes ]
T620 388-389 . denotes .
T621 389-514 sentence denotes Patients with MLIV do not show mucopolysaccharide excretion, skeletal changes, or organomegaly like the other mucolipidoses.
T622 390-398 NNS denotes Patients
T623 416-420 VB denotes show
T624 399-403 IN denotes with
T625 404-408 NN denotes MLIV
T626 409-411 VBP denotes do
T627 412-415 RB denotes not
T628 421-439 NN denotes mucopolysaccharide
T629 440-449 NN denotes excretion
T630 449-451 , denotes ,
T631 451-459 JJ denotes skeletal
T632 460-467 NNS denotes changes
T633 467-469 , denotes ,
T634 469-471 CC denotes or
T635 472-484 RB denotes organomegaly
T636 485-489 IN denotes like
T637 490-493 DT denotes the
T638 500-513 NNS denotes mucolipidoses
T639 494-499 JJ denotes other
T640 513-514 . denotes .
T641 514-722 sentence denotes Abnormal lysosomal storage bodies and large vacuoles have been found in skin and conjuctival biopsies using electron-microscopy and, prior to gene identification, served as the only means of diagnosis [3-5].
T642 515-523 JJ denotes Abnormal
T643 542-548 NNS denotes bodies
T644 524-533 JJ denotes lysosomal
T645 534-541 NN denotes storage
T646 578-583 VBN denotes found
T647 549-552 CC denotes and
T648 553-558 JJ denotes large
T649 559-567 NNS denotes vacuoles
T650 568-572 VBP denotes have
T651 573-577 VBN denotes been
T652 584-586 IN denotes in
T653 587-591 NN denotes skin
T654 608-616 NNS denotes biopsies
T655 592-595 CC denotes and
T656 596-607 JJ denotes conjuctival
T657 617-622 VBG denotes using
T658 623-631 NN denotes electron
T659 632-642 NN denotes microscopy
T660 631-632 HYPH denotes -
T661 643-646 CC denotes and
T662 646-648 , denotes ,
T663 648-653 JJ denotes prior
T664 654-656 IN denotes to
T665 657-661 NN denotes gene
T666 662-676 NN denotes identification
T667 676-678 , denotes ,
T668 678-684 VBD denotes served
T669 685-687 IN denotes as
T670 688-691 DT denotes the
T671 697-702 NN denotes means
T672 692-696 JJ denotes only
T673 703-705 IN denotes of
T674 706-715 NN denotes diagnosis
T675 716-717 -LRB- denotes [
T676 717-718 CD denotes 3
T677 718-719 SYM denotes -
T678 719-720 CD denotes 5
T679 720-721 -RRB- denotes ]
T680 721-722 . denotes .
T681 722-905 sentence denotes A recent report estimates that the carrier frequency of MLIV in the Ashkenazi Jewish population is 1 in 100, and mutations have been reported in Jewish and non-Jewish families [6-9].
T682 723-724 DT denotes A
T683 732-738 NN denotes report
T684 725-731 JJ denotes recent
T685 739-748 VBZ denotes estimates
T686 749-753 IN denotes that
T687 819-821 VBZ denotes is
T688 754-757 DT denotes the
T689 766-775 NN denotes frequency
T690 758-765 NN denotes carrier
T691 776-778 IN denotes of
T692 779-783 NN denotes MLIV
T693 784-786 IN denotes in
T694 787-790 DT denotes the
T695 808-818 NN denotes population
T696 791-800 NNP denotes Ashkenazi
T697 801-807 JJ denotes Jewish
T698 822-823 CD denotes 1
T699 824-826 IN denotes in
T700 827-830 CD denotes 100
T701 830-832 , denotes ,
T702 832-835 CC denotes and
T703 836-845 NNS denotes mutations
T704 856-864 VBN denotes reported
T705 846-850 VBP denotes have
T706 851-855 VBN denotes been
T707 865-867 IN denotes in
T708 868-874 JJ denotes Jewish
T709 890-898 NNS denotes families
T710 875-878 CC denotes and
T711 879-889 JJ denotes non-Jewish
T712 899-900 -LRB- denotes [
T713 900-901 CD denotes 6
T714 901-902 SYM denotes -
T715 902-903 CD denotes 9
T716 903-904 -RRB- denotes ]
T717 904-905 . denotes .
T718 905-1106 sentence denotes The human gene MCOLN1 (GenBank #AF287270) maps to chromosome 19p13.2-13.3 and encodes a novel protein that is a member of the transient receptor potential (TRP) cation channel gene superfamily [7-10].
T719 906-909 DT denotes The
T720 916-920 NN denotes gene
T721 910-915 JJ denotes human
T722 948-952 VBZ denotes maps
T723 921-927 NN denotes MCOLN1
T724 928-929 -LRB- denotes (
T725 938-946 NN denotes AF287270
T726 929-936 NNP denotes GenBank
T727 937-938 NN denotes #
T728 946-947 -RRB- denotes )
T729 953-955 IN denotes to
T730 956-966 NN denotes chromosome
T731 967-974 CD denotes 19p13.2
T732 974-975 SYM denotes -
T733 975-979 CD denotes 13.3
T734 980-983 CC denotes and
T735 984-991 VBZ denotes encodes
T736 992-993 DT denotes a
T737 1000-1007 NN denotes protein
T738 994-999 JJ denotes novel
T739 1008-1012 WDT denotes that
T740 1013-1015 VBZ denotes is
T741 1016-1017 DT denotes a
T742 1018-1024 NN denotes member
T743 1025-1027 IN denotes of
T744 1028-1031 DT denotes the
T745 1087-1098 NN denotes superfamily
T746 1032-1041 JJ denotes transient
T747 1051-1060 NN denotes potential
T748 1042-1050 NN denotes receptor
T749 1061-1062 -LRB- denotes (
T750 1062-1065 NN denotes TRP
T751 1065-1066 -RRB- denotes )
T752 1067-1073 NN denotes cation
T753 1074-1081 NN denotes channel
T754 1082-1086 NN denotes gene
T755 1099-1100 -LRB- denotes [
T756 1100-1101 CD denotes 7
T757 1101-1102 SYM denotes -
T758 1102-1104 CD denotes 10
T759 1104-1105 -RRB- denotes ]
T760 1105-1106 . denotes .
T761 1106-1315 sentence denotes Protein trafficking studies suggest that MLIV is the result of a defect in the late endocytic pathway, contrary to the other mucolipidoses which are typically caused by defective lysosomal hydrolases [11,12].
T762 1107-1114 NN denotes Protein
T763 1115-1126 NN denotes trafficking
T764 1127-1134 NNS denotes studies
T765 1135-1142 VBP denotes suggest
T766 1143-1147 IN denotes that
T767 1153-1155 VBZ denotes is
T768 1148-1152 NN denotes MLIV
T769 1156-1159 DT denotes the
T770 1160-1166 NN denotes result
T771 1167-1169 IN denotes of
T772 1170-1171 DT denotes a
T773 1172-1178 NN denotes defect
T774 1179-1181 IN denotes in
T775 1182-1185 DT denotes the
T776 1201-1208 NN denotes pathway
T777 1186-1190 JJ denotes late
T778 1191-1200 JJ denotes endocytic
T779 1208-1210 , denotes ,
T780 1210-1218 JJ denotes contrary
T781 1219-1221 IN denotes to
T782 1222-1225 DT denotes the
T783 1232-1245 NNS denotes mucolipidoses
T784 1226-1231 JJ denotes other
T785 1246-1251 WDT denotes which
T786 1266-1272 VBN denotes caused
T787 1252-1255 VBP denotes are
T788 1256-1265 RB denotes typically
T789 1273-1275 IN denotes by
T790 1276-1285 JJ denotes defective
T791 1296-1306 NNS denotes hydrolases
T792 1286-1295 JJ denotes lysosomal
T793 1307-1308 -LRB- denotes [
T794 1311-1313 CD denotes 12
T795 1308-1310 CD denotes 11
T796 1310-1311 , denotes ,
T797 1313-1314 -RRB- denotes ]
T798 1314-1315 . denotes .
T799 1315-1379 sentence denotes Recent work in Caenorhabditis elegans supports this hypothesis.
T800 1316-1322 JJ denotes Recent
T801 1323-1327 NN denotes work
T802 1354-1362 VBZ denotes supports
T803 1328-1330 IN denotes in
T804 1331-1345 NNP denotes Caenorhabditis
T805 1346-1353 NNP denotes elegans
T806 1363-1367 DT denotes this
T807 1368-1378 NN denotes hypothesis
T808 1378-1379 . denotes .
T809 1379-1642 sentence denotes Loss of function mutants of the MCOLN1 C. elegans homologue, cup-5, result in an increased rate of endocytosis, accumulation of large vacuoles, and a decreased rate of endocytosed protein breakdown; while over-expression of this gene reverses the phenotype [13].
T810 1380-1384 NN denotes Loss
T811 1397-1404 NNS denotes mutants
T812 1385-1387 IN denotes of
T813 1388-1396 NN denotes function
T814 1448-1454 VBP denotes result
T815 1405-1407 IN denotes of
T816 1408-1411 DT denotes the
T817 1430-1439 NN denotes homologue
T818 1412-1418 NN denotes MCOLN1
T819 1422-1429 NNP denotes elegans
T820 1419-1421 NNP denotes C.
T821 1439-1441 , denotes ,
T822 1441-1444 NN denotes cup
T823 1444-1445 HYPH denotes -
T824 1445-1446 CD denotes 5
T825 1446-1448 , denotes ,
T826 1455-1457 IN denotes in
T827 1458-1460 DT denotes an
T828 1471-1475 NN denotes rate
T829 1461-1470 VBN denotes increased
T830 1476-1478 IN denotes of
T831 1479-1490 NN denotes endocytosis
T832 1490-1492 , denotes ,
T833 1492-1504 NN denotes accumulation
T834 1505-1507 IN denotes of
T835 1508-1513 JJ denotes large
T836 1514-1522 NNS denotes vacuoles
T837 1522-1524 , denotes ,
T838 1524-1527 CC denotes and
T839 1528-1529 DT denotes a
T840 1540-1544 NN denotes rate
T841 1530-1539 VBN denotes decreased
T842 1545-1547 IN denotes of
T843 1548-1559 VBN denotes endocytosed
T844 1560-1567 NN denotes protein
T845 1568-1577 NN denotes breakdown
T846 1577-1578 : denotes ;
T847 1579-1584 IN denotes while
T848 1614-1622 VBZ denotes reverses
T849 1585-1600 NN denotes over-expression
T850 1601-1603 IN denotes of
T851 1604-1608 DT denotes this
T852 1609-1613 NN denotes gene
T853 1623-1626 DT denotes the
T854 1627-1636 NN denotes phenotype
T855 1637-1638 -LRB- denotes [
T856 1638-1640 CD denotes 13
T857 1640-1641 -RRB- denotes ]
T858 1641-1642 . denotes .
T859 1642-1791 sentence denotes Cloning and characterization of the mouse homologue of MCOLN1 is crucial for the development of mouse models of MLIV to further study this disorder.
T860 1643-1650 NN denotes Cloning
T861 1705-1707 VBZ denotes is
T862 1651-1654 CC denotes and
T863 1655-1671 NN denotes characterization
T864 1672-1674 IN denotes of
T865 1675-1678 DT denotes the
T866 1685-1694 NN denotes homologue
T867 1679-1684 NN denotes mouse
T868 1695-1697 IN denotes of
T869 1698-1704 NN denotes MCOLN1
T870 1708-1715 JJ denotes crucial
T871 1716-1719 IN denotes for
T872 1720-1723 DT denotes the
T873 1724-1735 NN denotes development
T874 1736-1738 IN denotes of
T875 1739-1744 NN denotes mouse
T876 1745-1751 NNS denotes models
T877 1752-1754 IN denotes of
T878 1755-1759 NN denotes MLIV
T879 1760-1762 TO denotes to
T880 1771-1776 VB denotes study
T881 1763-1770 RB denotes further
T882 1777-1781 DT denotes this
T883 1782-1790 NN denotes disorder
T884 1790-1791 . denotes .
R270 T560 T561 compound Mucolipidosis,type
R271 T561 T562 nsubj type,is
R272 T563 T561 nummod IV,type
R273 T564 T561 punct (,type
R274 T565 T561 appos MLIV,type
R275 T566 T567 punct ;,MIM
R276 T567 T561 parataxis MIM,type
R277 T568 T567 nummod 252650,MIM
R278 T569 T567 punct ),MIM
R279 T570 T571 det an,disorder
R280 T571 T562 attr disorder,is
R281 T572 T571 amod autosomal,disorder
R282 T573 T571 amod recessive,disorder
R283 T574 T571 amod lysosomal,disorder
R284 T575 T571 compound storage,disorder
R285 T576 T577 dep that,characterized
R286 T577 T571 relcl characterized,disorder
R287 T578 T577 auxpass is,characterized
R288 T579 T577 agent by,characterized
R289 T580 T581 amod corneal,clouding
R290 T581 T579 pobj clouding,by
R291 T582 T581 punct ", ",clouding
R292 T583 T584 amod delayed,development
R293 T584 T581 conj development,clouding
R294 T585 T584 compound psychomotor,development
R295 T586 T584 punct ", ",development
R296 T587 T584 cc and,development
R297 T588 T589 amod mental,retardation
R298 T589 T584 conj retardation,development
R299 T590 T591 dep that,presents
R300 T591 T589 relcl presents,retardation
R301 T592 T591 advmod usually,presents
R302 T593 T591 prep during,presents
R303 T594 T595 det the,year
R304 T595 T593 pobj year,during
R305 T596 T595 amod first,year
R306 T597 T595 prep of,year
R307 T598 T597 pobj life,of
R308 T599 T600 punct [,1
R309 T600 T562 parataxis 1,is
R310 T601 T600 punct ],1
R311 T602 T562 punct .,is
R312 T604 T605 det Another,characteristic
R313 T605 T608 nsubj characteristic,is
R314 T606 T605 amod interesting,characteristic
R315 T607 T605 amod clinical,characteristic
R316 T609 T610 mark that,are
R317 T610 T608 ccomp are,is
R318 T611 T610 nsubj patients,are
R319 T612 T613 advmod constitutively,achlorhydric
R320 T613 T610 acomp achlorhydric,are
R321 T614 T613 prep with,achlorhydric
R322 T615 T616 amod associated,hypergastremia
R323 T616 T614 pobj hypergastremia,with
R324 T617 T618 punct [,2
R325 T618 T608 parataxis 2,is
R326 T619 T618 punct ],2
R327 T620 T608 punct .,is
R328 T622 T623 nsubj Patients,show
R329 T624 T622 prep with,Patients
R330 T625 T624 pobj MLIV,with
R331 T626 T623 aux do,show
R332 T627 T623 neg not,show
R333 T628 T629 compound mucopolysaccharide,excretion
R334 T629 T623 dobj excretion,show
R335 T630 T629 punct ", ",excretion
R336 T631 T632 amod skeletal,changes
R337 T632 T629 conj changes,excretion
R338 T633 T632 punct ", ",changes
R339 T634 T632 cc or,changes
R340 T635 T632 conj organomegaly,changes
R341 T636 T623 prep like,show
R342 T637 T638 det the,mucolipidoses
R343 T638 T636 pobj mucolipidoses,like
R344 T639 T638 amod other,mucolipidoses
R345 T640 T623 punct .,show
R346 T642 T643 amod Abnormal,bodies
R347 T643 T646 nsubjpass bodies,found
R348 T644 T643 amod lysosomal,bodies
R349 T645 T643 compound storage,bodies
R350 T647 T643 cc and,bodies
R351 T648 T649 amod large,vacuoles
R352 T649 T643 conj vacuoles,bodies
R353 T650 T646 aux have,found
R354 T651 T646 auxpass been,found
R355 T652 T646 prep in,found
R356 T653 T654 nmod skin,biopsies
R357 T654 T652 pobj biopsies,in
R358 T655 T653 cc and,skin
R359 T656 T653 conj conjuctival,skin
R360 T657 T646 advcl using,found
R361 T658 T659 compound electron,microscopy
R362 T659 T657 dobj microscopy,using
R363 T660 T659 punct -,microscopy
R364 T661 T646 cc and,found
R365 T662 T646 punct ", ",found
R366 T663 T664 amod prior,to
R367 T664 T646 prep to,found
R368 T665 T666 compound gene,identification
R369 T666 T664 pobj identification,to
R370 T667 T646 punct ", ",found
R371 T668 T646 conj served,found
R372 T669 T668 prep as,served
R373 T670 T671 det the,means
R374 T671 T669 pobj means,as
R375 T672 T671 amod only,means
R376 T673 T671 prep of,means
R377 T674 T673 pobj diagnosis,of
R378 T675 T676 punct [,3
R379 T676 T668 parataxis 3,served
R380 T677 T678 punct -,5
R381 T678 T676 prep 5,3
R382 T679 T676 punct ],3
R383 T680 T646 punct .,found
R384 T682 T683 det A,report
R385 T683 T685 nsubj report,estimates
R386 T684 T683 amod recent,report
R387 T686 T687 mark that,is
R388 T687 T685 ccomp is,estimates
R389 T688 T689 det the,frequency
R390 T689 T687 nsubj frequency,is
R391 T690 T689 compound carrier,frequency
R392 T691 T689 prep of,frequency
R393 T692 T691 pobj MLIV,of
R394 T693 T689 prep in,frequency
R395 T694 T695 det the,population
R396 T695 T693 pobj population,in
R397 T696 T697 npadvmod Ashkenazi,Jewish
R398 T697 T695 amod Jewish,population
R399 T698 T687 attr 1,is
R400 T699 T698 prep in,1
R401 T700 T699 pobj 100,in
R402 T701 T685 punct ", ",estimates
R403 T702 T685 cc and,estimates
R404 T703 T704 nsubjpass mutations,reported
R405 T704 T685 conj reported,estimates
R406 T705 T704 aux have,reported
R407 T706 T704 auxpass been,reported
R408 T707 T704 prep in,reported
R409 T708 T709 amod Jewish,families
R410 T709 T707 pobj families,in
R411 T710 T708 cc and,Jewish
R412 T711 T708 conj non-Jewish,Jewish
R413 T712 T713 punct [,6
R414 T713 T704 parataxis 6,reported
R415 T714 T715 punct -,9
R416 T715 T713 prep 9,6
R417 T716 T713 punct ],6
R418 T717 T704 punct .,reported
R419 T719 T720 det The,gene
R420 T720 T722 nsubj gene,maps
R421 T721 T720 amod human,gene
R422 T723 T720 appos MCOLN1,gene
R423 T724 T725 punct (,AF287270
R424 T725 T720 parataxis AF287270,gene
R425 T726 T725 compound GenBank,AF287270
R426 T727 T725 compound #,AF287270
R427 T728 T725 punct ),AF287270
R428 T729 T722 prep to,maps
R429 T730 T729 pobj chromosome,to
R430 T731 T730 nummod 19p13.2,chromosome
R431 T732 T733 punct -,13.3
R432 T733 T730 prep 13.3,chromosome
R433 T734 T722 cc and,maps
R434 T735 T722 conj encodes,maps
R435 T736 T737 det a,protein
R436 T737 T735 dobj protein,encodes
R437 T738 T737 amod novel,protein
R438 T739 T740 dep that,is
R439 T740 T737 relcl is,protein
R440 T741 T742 det a,member
R441 T742 T740 attr member,is
R442 T743 T742 prep of,member
R443 T744 T745 det the,superfamily
R444 T745 T743 pobj superfamily,of
R445 T746 T747 amod transient,potential
R446 T747 T745 nmod potential,superfamily
R447 T748 T747 nmod receptor,potential
R448 T749 T747 punct (,potential
R449 T750 T747 appos TRP,potential
R450 T751 T745 punct ),superfamily
R451 T752 T753 compound cation,channel
R452 T753 T745 compound channel,superfamily
R453 T754 T745 compound gene,superfamily
R454 T755 T756 punct [,7
R455 T756 T735 parataxis 7,encodes
R456 T757 T758 punct -,10
R457 T758 T756 prep 10,7
R458 T759 T756 punct ],7
R459 T760 T722 punct .,maps
R460 T762 T763 compound Protein,trafficking
R461 T763 T764 compound trafficking,studies
R462 T764 T765 nsubj studies,suggest
R463 T766 T767 mark that,is
R464 T767 T765 ccomp is,suggest
R465 T768 T767 nsubj MLIV,is
R466 T769 T770 det the,result
R467 T770 T767 attr result,is
R468 T771 T770 prep of,result
R469 T772 T773 det a,defect
R470 T773 T771 pobj defect,of
R471 T774 T773 prep in,defect
R472 T775 T776 det the,pathway
R473 T776 T774 pobj pathway,in
R474 T777 T776 amod late,pathway
R475 T778 T776 amod endocytic,pathway
R476 T779 T765 punct ", ",suggest
R477 T780 T765 advcl contrary,suggest
R478 T781 T780 prep to,contrary
R479 T782 T783 det the,mucolipidoses
R480 T783 T781 pobj mucolipidoses,to
R481 T784 T783 amod other,mucolipidoses
R482 T785 T786 dep which,caused
R483 T786 T783 relcl caused,mucolipidoses
R484 T787 T786 auxpass are,caused
R485 T788 T786 advmod typically,caused
R486 T789 T786 agent by,caused
R487 T790 T791 amod defective,hydrolases
R488 T791 T789 pobj hydrolases,by
R489 T792 T791 amod lysosomal,hydrolases
R490 T793 T794 punct [,12
R491 T794 T765 parataxis 12,suggest
R492 T795 T794 nummod 11,12
R493 T796 T794 punct ",",12
R494 T797 T794 punct ],12
R495 T798 T765 punct .,suggest
R496 T800 T801 amod Recent,work
R497 T801 T802 nsubj work,supports
R498 T803 T801 prep in,work
R499 T804 T805 compound Caenorhabditis,elegans
R500 T805 T803 pobj elegans,in
R501 T806 T807 det this,hypothesis
R502 T807 T802 dobj hypothesis,supports
R503 T808 T802 punct .,supports
R504 T810 T811 nmod Loss,mutants
R505 T811 T814 nsubj mutants,result
R506 T812 T810 prep of,Loss
R507 T813 T812 pobj function,of
R508 T815 T811 prep of,mutants
R509 T816 T817 det the,homologue
R510 T817 T815 pobj homologue,of
R511 T818 T819 compound MCOLN1,elegans
R512 T819 T817 compound elegans,homologue
R513 T820 T819 compound C.,elegans
R514 T821 T817 punct ", ",homologue
R515 T822 T817 appos cup,homologue
R516 T823 T822 punct -,cup
R517 T824 T822 nummod 5,cup
R518 T825 T814 punct ", ",result
R519 T826 T814 prep in,result
R520 T827 T828 det an,rate
R521 T828 T826 pobj rate,in
R522 T829 T828 amod increased,rate
R523 T830 T828 prep of,rate
R524 T831 T830 pobj endocytosis,of
R525 T832 T828 punct ", ",rate
R526 T833 T828 conj accumulation,rate
R527 T834 T833 prep of,accumulation
R528 T835 T836 amod large,vacuoles
R529 T836 T834 pobj vacuoles,of
R530 T837 T833 punct ", ",accumulation
R531 T838 T833 cc and,accumulation
R532 T839 T840 det a,rate
R533 T840 T833 conj rate,accumulation
R534 T841 T840 amod decreased,rate
R535 T842 T840 prep of,rate
R536 T843 T844 amod endocytosed,protein
R537 T844 T845 compound protein,breakdown
R538 T845 T842 pobj breakdown,of
R539 T846 T814 punct ;,result
R540 T847 T848 mark while,reverses
R541 T848 T814 advcl reverses,result
R542 T849 T848 nsubj over-expression,reverses
R543 T850 T849 prep of,over-expression
R544 T851 T852 det this,gene
R545 T852 T850 pobj gene,of
R546 T853 T854 det the,phenotype
R547 T854 T848 dobj phenotype,reverses
R548 T855 T856 punct [,13
R549 T856 T814 parataxis 13,result
R550 T857 T856 punct ],13
R551 T858 T814 punct .,result
R552 T860 T861 nsubj Cloning,is
R553 T862 T860 cc and,Cloning
R554 T863 T860 conj characterization,Cloning
R555 T864 T860 prep of,Cloning
R556 T865 T866 det the,homologue
R557 T866 T864 pobj homologue,of
R558 T867 T866 compound mouse,homologue
R559 T868 T866 prep of,homologue
R560 T869 T868 pobj MCOLN1,of
R561 T870 T861 acomp crucial,is
R562 T871 T861 prep for,is
R563 T872 T873 det the,development
R564 T873 T871 pobj development,for
R565 T874 T873 prep of,development
R566 T875 T876 compound mouse,models
R567 T876 T874 pobj models,of
R568 T877 T876 prep of,models
R569 T878 T877 pobj MLIV,of
R570 T879 T880 aux to,study
R571 T880 T861 advcl study,is
R572 T881 T880 advmod further,study
R573 T882 T883 det this,disorder
R574 T883 T880 dobj disorder,study
R575 T884 T861 punct .,is

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T520 58-67 GO:0030849 denotes autosomal
T521 78-87 GO:0005764 denotes lysosomal
T522 130-137 UBERON:0000964 denotes corneal
T523 156-167 GO:0036343 denotes psychomotor
T524 251-255 UBERON:0000104 denotes life
T525 421-439 CHEBI:37395 denotes mucopolysaccharide
T526 440-449 GO:0007588 denotes excretion
T527 451-459 UBERON:0004288 denotes skeletal
T528 524-533 GO:0005764 denotes lysosomal
T529 534-548 GO:0000322 denotes storage bodies
T530 559-567 GO:0005773 denotes vacuoles
T531 596-607 UBERON:0001811 denotes conjuctival
T532 623-631 CHEBI:10545 denotes electron
T533 657-661 SO:0000704 denotes gene
T534 910-915 NCBITaxon:9606 denotes human
T535 916-920 SO:0000704 denotes gene
T536 921-927 PR:000010252 denotes MCOLN1
T537 1032-1060 _FRAGMENT denotes transient receptor potential
T538 1067-1081 PR:000000681 denotes cation channel
T539 1062-1065 _FRAGMENT denotes TRP
T540 1067-1073 CHEBI:36916 denotes cation
T541 1082-1086 SO:0000704 denotes gene
T542 1107-1126 GO:0015031 denotes Protein trafficking
T543 1191-1200 GO:0006897 denotes endocytic
T544 1286-1295 GO:0005764 denotes lysosomal
T545 1331-1353 NCBITaxon:6239 denotes Caenorhabditis elegans
T546 1412-1418 PR:000010252 denotes MCOLN1
T547 1419-1429 NCBITaxon:6239 denotes C. elegans
T548 1430-1439 SO:0000853 denotes homologue
T549 1441-1446 PR:000010252 denotes cup-5
T550 1479-1490 GO:0006897 denotes endocytosis
T551 1514-1522 GO:0005773 denotes vacuoles
T552 1548-1559 GO:0006897 denotes endocytosed
T553 1560-1577 GO:0030163 denotes protein breakdown
T554 1590-1600 GO:0010467 denotes expression
T555 1609-1613 SO:0000704 denotes gene
T556 1679-1684 NCBITaxon:10088 denotes mouse
T557 1685-1694 SO:0000853 denotes homologue
T558 1698-1704 PR:000010252 denotes MCOLN1
T559 1739-1744 NCBITaxon:10088 denotes mouse
R268 T538 T537 _lexicallyChainedTo cation channel,transient receptor potential
R269 T538 T539 _lexicallyChainedTo cation channel,TRP

2_test

Id Subject Object Predicate Lexical cue
11897010-2438637-10449839 257-258 2438637 denotes 1
11897010-9448310-10449840 386-387 9448310 denotes 2
11897010-4365943-10449841 717-718 4365943 denotes 3
11897010-7114093-10449841 717-718 7114093 denotes 3
11897010-187156-10449841 717-718 187156 denotes 3
11897010-11317355-10449842 900-901 11317355 denotes 6
11897010-10973263-10449842 900-901 10973263 denotes 6
11897010-11013137-10449842 900-901 11013137 denotes 6
11897010-11030752-10449842 900-901 11030752 denotes 6
11897010-10973263-10449843 1100-1101 10973263 denotes 7
11897010-11013137-10449843 1100-1101 11013137 denotes 7
11897010-11030752-10449843 1100-1101 11030752 denotes 7
11897010-10441585-10449843 1100-1101 10441585 denotes 7
11897010-9323557-10449844 1308-1310 9323557 denotes 11
11897010-9600972-10449845 1311-1313 9600972 denotes 12
11897010-11326278-10449846 1638-1640 11326278 denotes 13

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T885 58-67 GO:0030849 denotes autosomal
T886 78-87 GO:0005764 denotes lysosomal
T887 130-137 UBERON:0000964 denotes corneal
T888 156-167 GO:0036343 denotes psychomotor
T889 251-255 UBERON:0000104 denotes life
T890 421-439 CHEBI:37395 denotes mucopolysaccharide
T891 440-449 GO:0007588 denotes excretion
T892 451-459 UBERON:0004288 denotes skeletal
T893 524-533 GO:0005764 denotes lysosomal
T894 534-548 GO:0000322 denotes storage bodies
T895 559-567 GO:0005773 denotes vacuoles
T896 587-591 UBERON_EXT:zone_of_skin_or_skin_of_body denotes skin
T897 596-607 UBERON:0001811 denotes conjuctival
T898 623-631 CHEBI:10545 denotes electron
T899 657-661 SO_EXT:0000704 denotes gene
T900 836-845 SO_EXT:sequence_alteration_entity_or_process denotes mutations
T901 910-915 NCBITaxon:9606 denotes human
T902 916-920 SO_EXT:0000704 denotes gene
T903 921-927 PR_EXT:000010252 denotes MCOLN1
T904 956-966 GO_SO_EXT:chromosome denotes chromosome
T905 984-991 SO_EXT:sequence_coding_function denotes encodes
T906 1000-1007 CHEBI_PR_EXT:protein denotes protein
T907 1032-1060 _FRAGMENT denotes transient receptor potential
T908 1067-1081 PR_EXT:000000681 denotes cation channel
T909 1042-1050 GO_EXT:0004872 denotes receptor
T910 1062-1065 _FRAGMENT denotes TRP
T911 1067-1073 CHEBI:36916 denotes cation
T912 1067-1081 GO_EXT:0005261 denotes cation channel
T913 1082-1086 SO_EXT:0000704 denotes gene
T914 1107-1114 CHEBI_PR_EXT:protein denotes Protein
T915 1107-1126 GO:0015031 denotes Protein trafficking
T916 1191-1200 GO:0006897 denotes endocytic
T917 1286-1295 GO:0005764 denotes lysosomal
T918 1296-1306 GO_EXT:0016787 denotes hydrolases
T919 1331-1353 NCBITaxon:6239 denotes Caenorhabditis elegans
T920 1397-1404 SO_EXT:sequence_altered_entity denotes mutants
T921 1412-1418 PR_EXT:000010252 denotes MCOLN1
T922 1419-1429 NCBITaxon:6239 denotes C. elegans
T923 1430-1439 SO_EXT:0000853 denotes homologue
T924 1441-1446 PR_EXT:000010252 denotes cup-5
T925 1479-1490 GO:0006897 denotes endocytosis
T926 1514-1522 GO:0005773 denotes vacuoles
T927 1548-1559 GO:0006897 denotes endocytosed
T928 1560-1567 CHEBI_PR_EXT:protein denotes protein
T929 1560-1577 GO:0030163 denotes protein breakdown
T930 1590-1600 GO:0010467 denotes expression
T931 1609-1613 SO_EXT:0000704 denotes gene
T932 1643-1650 SO_EXT:sequence_cloning_process denotes Cloning
T933 1679-1684 NCBITaxon:10088 denotes mouse
T934 1685-1694 SO_EXT:0000853 denotes homologue
T935 1698-1704 PR_EXT:000010252 denotes MCOLN1
T936 1739-1744 NCBITaxon:10088 denotes mouse
R576 T908 T907 _lexicallyChainedTo cation channel,transient receptor potential
R577 T908 T910 _lexicallyChainedTo cation channel,TRP