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PMC:88885 / 127-1606 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T283 773-783 NN denotes transcript
T284 839-846 VBZ denotes encodes
T285 784-788 WDT denotes that
T140 30-32 CD denotes IV
T141 33-34 -LRB- denotes (
T142 34-38 NN denotes MLIV
T143 38-39 -RRB- denotes )
T144 43-45 DT denotes an
T145 84-92 NN denotes disorder
T146 46-55 JJ denotes autosomal
T147 56-65 JJ denotes recessive
T148 66-75 JJ denotes lysosomal
T149 76-83 NN denotes storage
T150 93-106 VBN denotes characterized
T151 107-109 IN denotes by
T152 110-116 JJ denotes severe
T153 147-160 NNS denotes abnormalities
T154 117-127 JJ denotes neurologic
T155 128-131 CC denotes and
T156 132-146 JJ denotes ophthalmologic
T157 160-161 . denotes .
T158 161-299 sentence denotes Recently the MLIV gene, MCOLN1, has been identified as a new member of the transient receptor potential (TRP) cation channel superfamily.
T159 162-170 RB denotes Recently
T160 203-213 VBN denotes identified
T161 171-174 DT denotes the
T162 180-184 NN denotes gene
T163 175-179 NN denotes MLIV
T164 184-186 , denotes ,
T165 186-192 NN denotes MCOLN1
T166 192-194 , denotes ,
T167 194-197 VBZ denotes has
T168 198-202 VBN denotes been
T169 214-216 IN denotes as
T170 217-218 DT denotes a
T171 223-229 NN denotes member
T172 219-222 JJ denotes new
T173 230-232 IN denotes of
T134 0-10 sentence denotes Background
T135 0-10 NN denotes Background
T136 10-161 sentence denotes Mucolipidosis type IV (MLIV) is an autosomal recessive lysosomal storage disorder characterized by severe neurologic and ophthalmologic abnormalities.
T137 11-24 NN denotes Mucolipidosis
T138 25-29 NN denotes type
T139 40-42 VBZ denotes is
T174 233-236 DT denotes the
T175 287-298 NN denotes superfamily
T176 237-246 JJ denotes transient
T177 256-265 NN denotes potential
T178 247-255 NN denotes receptor
T179 266-267 -LRB- denotes (
T180 267-270 NN denotes TRP
T181 270-271 -RRB- denotes )
T182 272-278 NN denotes cation
T183 279-286 NN denotes channel
T184 298-299 . denotes .
T185 299-441 sentence denotes Here we report the cloning and characterization of the mouse homologue, Mcoln1, and report a novel splice variant that is not seen in humans.
T186 300-304 RB denotes Here
T187 308-314 VBP denotes report
T188 305-307 PRP denotes we
T189 315-318 DT denotes the
T190 319-326 NN denotes cloning
T191 327-330 CC denotes and
T192 331-347 NN denotes characterization
T193 348-350 IN denotes of
T194 351-354 DT denotes the
T195 361-370 NN denotes homologue
T196 355-360 NN denotes mouse
T197 370-372 , denotes ,
T198 372-378 NN denotes Mcoln1
T199 378-380 , denotes ,
T200 380-383 CC denotes and
T201 384-390 VBP denotes report
T202 391-392 DT denotes a
T203 406-413 NN denotes variant
T204 393-398 JJ denotes novel
T205 399-405 NN denotes splice
T206 414-418 WDT denotes that
T207 426-430 VBN denotes seen
T208 419-421 VBZ denotes is
T209 422-425 RB denotes not
T210 431-433 IN denotes in
T211 434-440 NNS denotes humans
T212 440-441 . denotes .
T213 441-450 sentence denotes Results
T214 443-450 NNS denotes Results
T215 450-510 sentence denotes The human and mouse genes display a high degree of synteny.
T216 451-454 DT denotes The
T217 471-476 NNS denotes genes
T218 455-460 JJ denotes human
T219 465-470 NN denotes mouse
T220 461-464 CC denotes and
T221 477-484 VBP denotes display
T222 485-486 DT denotes a
T223 492-498 NN denotes degree
T224 487-491 JJ denotes high
T225 499-501 IN denotes of
T226 502-509 NN denotes synteny
T227 509-510 . denotes .
T228 510-577 sentence denotes Mcoln1 shows 91% amino acid and 86% nucleotide identity to MCOLN1.
T229 511-517 NN denotes Mcoln1
T230 518-523 VBZ denotes shows
T231 524-526 CD denotes 91
T232 526-527 NN denotes %
T233 534-538 NN denotes acid
T234 528-533 NN denotes amino
T235 558-566 NN denotes identity
T236 539-542 CC denotes and
T237 543-545 CD denotes 86
T238 545-546 NN denotes %
T239 547-557 NN denotes nucleotide
T240 567-569 IN denotes to
T241 570-576 NN denotes MCOLN1
T242 576-577 . denotes .
T243 577-768 sentence denotes Also, Mcoln1 maps to chromosome 8 and contains an open reading frame of 580 amino acids, with a transcript length of approximately 2 kb encoded by 14 exons, similar to its human counterpart.
T244 578-582 RB denotes Also
T245 591-595 VBZ denotes maps
T246 582-584 , denotes ,
T247 584-590 NN denotes Mcoln1
T248 596-598 IN denotes to
T249 599-609 NN denotes chromosome
T250 610-611 CD denotes 8
T251 612-615 CC denotes and
T252 616-624 VBZ denotes contains
T253 625-627 DT denotes an
T254 641-646 NN denotes frame
T255 628-632 JJ denotes open
T256 633-640 NN denotes reading
T257 647-649 IN denotes of
T258 650-653 CD denotes 580
T259 660-665 NNS denotes acids
T260 654-659 NN denotes amino
T261 665-667 , denotes ,
T262 667-671 IN denotes with
T263 672-673 DT denotes a
T264 685-691 NN denotes length
T265 674-684 NN denotes transcript
T266 692-694 IN denotes of
T267 695-708 RB denotes approximately
T268 709-710 CD denotes 2
T269 711-713 NNS denotes kb
T270 714-721 VBN denotes encoded
T271 722-724 IN denotes by
T272 725-727 CD denotes 14
T273 728-733 NNS denotes exons
T274 733-735 , denotes ,
T275 735-742 JJ denotes similar
T276 743-745 IN denotes to
T277 746-749 PRP$ denotes its
T278 756-767 NN denotes counterpart
T279 750-755 JJ denotes human
T280 767-768 . denotes .
T281 768-903 sentence denotes The transcript that results from murine specific alternative splicing encodes a 611 amino acid protein that differs at the c-terminus.
T282 769-772 DT denotes The
T286 789-796 VBZ denotes results
T287 797-801 IN denotes from
T288 802-808 NN denotes murine
T289 809-817 JJ denotes specific
T290 830-838 NN denotes splicing
T291 818-829 JJ denotes alternative
T292 847-848 DT denotes a
T293 864-871 NN denotes protein
T294 849-852 CD denotes 611
T295 859-863 NN denotes acid
T296 853-858 NN denotes amino
T297 872-876 WDT denotes that
T298 877-884 VBZ denotes differs
T299 885-887 IN denotes at
T300 888-891 DT denotes the
T301 894-902 NN denotes terminus
T302 892-893 NN denotes c
T303 893-894 HYPH denotes -
T304 902-903 . denotes .
T305 903-916 sentence denotes Conclusions
T306 905-916 NNS denotes Conclusions
T307 916-1013 sentence denotes Mcoln1 is highly similar to MCOLN1, especially in the transmembrane domains and ion pore region.
T308 917-923 NN denotes Mcoln1
T309 924-926 VBZ denotes is
T310 927-933 RB denotes highly
T311 934-941 JJ denotes similar
T312 942-944 IN denotes to
T313 945-951 NN denotes MCOLN1
T314 951-953 , denotes ,
T315 953-963 RB denotes especially
T316 964-966 IN denotes in
T317 967-970 DT denotes the
T318 985-992 NNS denotes domains
T319 971-984 NN denotes transmembrane
T320 993-996 CC denotes and
T321 997-1000 NN denotes ion
T322 1001-1005 NN denotes pore
T323 1006-1012 NN denotes region
T324 1012-1013 . denotes .
T325 1013-1163 sentence denotes Also, the late endosomal/lysosomal targeting signal is conserved, supporting the hypothesis that the protein is localized to these vesicle membranes.
T326 1014-1018 RB denotes Also
T327 1069-1078 VBN denotes conserved
T328 1018-1020 , denotes ,
T329 1020-1023 DT denotes the
T330 1059-1065 NN denotes signal
T331 1024-1028 JJ denotes late
T332 1029-1038 JJ denotes endosomal
T333 1039-1048 JJ denotes lysosomal
T334 1038-1039 HYPH denotes /
T335 1049-1058 NN denotes targeting
T336 1066-1068 VBZ denotes is
T337 1078-1080 , denotes ,
T338 1080-1090 VBG denotes supporting
T339 1091-1094 DT denotes the
T340 1095-1105 NN denotes hypothesis
T341 1106-1110 IN denotes that
T342 1126-1135 VBN denotes localized
T343 1111-1114 DT denotes the
T344 1115-1122 NN denotes protein
T345 1123-1125 VBZ denotes is
T346 1136-1138 IN denotes to
T347 1139-1144 DT denotes these
T348 1153-1162 NNS denotes membranes
T349 1145-1152 NN denotes vesicle
T350 1162-1163 . denotes .
T351 1163-1244 sentence denotes To date, there are very few reports describing species-specific splice variants.
T352 1164-1166 IN denotes To
T353 1179-1182 VBP denotes are
T354 1167-1171 NN denotes date
T355 1171-1173 , denotes ,
T356 1173-1178 EX denotes there
T357 1183-1187 RB denotes very
T358 1188-1191 JJ denotes few
T359 1192-1199 NNS denotes reports
T360 1200-1210 VBG denotes describing
T361 1211-1218 NN denotes species
T362 1219-1227 JJ denotes specific
T363 1218-1219 HYPH denotes -
T364 1235-1243 NNS denotes variants
T365 1228-1234 NN denotes splice
T366 1243-1244 . denotes .
T367 1244-1479 sentence denotes While identification of Mcoln1 is crucial to the development of mouse models for MLIV, the fact that there are two transcripts in mice suggests an additional or alternate function of the gene that may complicate phenotypic assessment.
T368 1245-1250 IN denotes While
T369 1276-1278 VBZ denotes is
T370 1251-1265 NN denotes identification
T371 1266-1268 IN denotes of
T372 1269-1275 NN denotes Mcoln1
T373 1380-1388 VBZ denotes suggests
T374 1279-1286 JJ denotes crucial
T375 1287-1289 IN denotes to
T376 1290-1293 DT denotes the
T377 1294-1305 NN denotes development
T378 1306-1308 IN denotes of
T379 1309-1314 NN denotes mouse
T380 1315-1321 NNS denotes models
T381 1322-1325 IN denotes for
T382 1326-1330 NN denotes MLIV
T383 1330-1332 , denotes ,
T384 1332-1335 DT denotes the
T385 1336-1340 NN denotes fact
T386 1341-1345 IN denotes that
T387 1352-1355 VBP denotes are
T388 1346-1351 EX denotes there
T389 1356-1359 CD denotes two
T390 1360-1371 NNS denotes transcripts
T391 1372-1374 IN denotes in
T392 1375-1379 NNS denotes mice
T393 1389-1391 DT denotes an
T394 1416-1424 NN denotes function
T395 1392-1402 JJ denotes additional
T396 1403-1405 CC denotes or
T397 1406-1415 JJ denotes alternate
T398 1425-1427 IN denotes of
T399 1428-1431 DT denotes the
T400 1432-1436 NN denotes gene
T401 1437-1441 WDT denotes that
T402 1446-1456 VB denotes complicate
T403 1442-1445 MD denotes may
T404 1457-1467 JJ denotes phenotypic
T405 1468-1478 NN denotes assessment
T406 1478-1479 . denotes .
R20 T137 T138 compound Mucolipidosis,type
R21 T138 T139 nsubj type,is
R22 T140 T138 nummod IV,type
R23 T141 T138 punct (,type
R24 T142 T138 appos MLIV,type
R25 T143 T139 punct ),is
R26 T144 T145 det an,disorder
R27 T145 T139 attr disorder,is
R28 T146 T145 amod autosomal,disorder
R29 T147 T145 amod recessive,disorder
R30 T148 T145 amod lysosomal,disorder
R31 T149 T145 compound storage,disorder
R32 T150 T145 acl characterized,disorder
R33 T151 T150 agent by,characterized
R34 T152 T153 amod severe,abnormalities
R36 T154 T153 amod neurologic,abnormalities
R37 T155 T154 cc and,neurologic
R38 T156 T154 conj ophthalmologic,neurologic
R39 T157 T139 punct .,is
R40 T159 T160 advmod Recently,identified
R41 T161 T162 det the,gene
R42 T162 T160 nsubjpass gene,identified
R43 T163 T162 compound MLIV,gene
R44 T164 T162 punct ", ",gene
R45 T165 T162 appos MCOLN1,gene
R46 T166 T160 punct ", ",identified
R47 T167 T160 aux has,identified
R48 T168 T160 auxpass been,identified
R49 T169 T160 prep as,identified
R50 T170 T171 det a,member
R51 T171 T169 pobj member,as
R52 T172 T171 amod new,member
R53 T173 T171 prep of,member
R54 T174 T175 det the,superfamily
R55 T175 T173 pobj superfamily,of
R56 T176 T177 amod transient,potential
R57 T177 T175 nmod potential,superfamily
R58 T178 T177 nmod receptor,potential
R59 T179 T177 punct (,potential
R60 T180 T177 appos TRP,potential
R61 T181 T175 punct ),superfamily
R62 T182 T183 compound cation,channel
R63 T183 T175 compound channel,superfamily
R64 T184 T160 punct .,identified
R65 T186 T187 advmod Here,report
R66 T188 T187 nsubj we,report
R67 T189 T190 det the,cloning
R68 T190 T187 dobj cloning,report
R69 T191 T190 cc and,cloning
R70 T192 T190 conj characterization,cloning
R71 T193 T190 prep of,cloning
R72 T194 T195 det the,homologue
R73 T195 T193 pobj homologue,of
R74 T196 T195 compound mouse,homologue
R75 T197 T195 punct ", ",homologue
R76 T198 T195 appos Mcoln1,homologue
R77 T199 T187 punct ", ",report
R78 T200 T187 cc and,report
R79 T201 T187 conj report,report
R80 T202 T203 det a,variant
R81 T203 T201 dobj variant,report
R82 T204 T203 amod novel,variant
R83 T205 T203 compound splice,variant
R84 T206 T207 dep that,seen
R85 T207 T203 relcl seen,variant
R86 T208 T207 auxpass is,seen
R87 T209 T207 neg not,seen
R88 T210 T207 prep in,seen
R89 T211 T210 pobj humans,in
R90 T212 T187 punct .,report
R91 T216 T217 det The,genes
R93 T218 T219 amod human,mouse
R94 T219 T217 compound mouse,genes
R95 T220 T219 cc and,mouse
R96 T222 T223 det a,degree
R97 T223 T221 dobj degree,display
R98 T224 T223 amod high,degree
R99 T225 T223 prep of,degree
R100 T226 T225 pobj synteny,of
R101 T227 T221 punct .,display
R102 T229 T230 nsubj Mcoln1,shows
R103 T231 T232 nummod 91,%
R104 T232 T233 nmod %,acid
R105 T233 T235 nmod acid,identity
R106 T234 T233 nmod amino,acid
R107 T235 T230 dobj identity,shows
R108 T236 T233 cc and,acid
R109 T237 T238 nummod 86,%
R110 T238 T239 compound %,nucleotide
R111 T239 T233 conj nucleotide,acid
R112 T240 T235 prep to,identity
R113 T241 T240 pobj MCOLN1,to
R114 T242 T230 punct .,shows
R115 T244 T245 advmod Also,maps
R116 T246 T245 punct ", ",maps
R117 T247 T245 nsubj Mcoln1,maps
R118 T248 T245 prep to,maps
R119 T249 T248 pobj chromosome,to
R120 T250 T249 nummod 8,chromosome
R121 T251 T245 cc and,maps
R122 T252 T245 conj contains,maps
R123 T253 T254 det an,frame
R124 T254 T252 dobj frame,contains
R125 T255 T254 amod open,frame
R126 T256 T254 compound reading,frame
R127 T257 T254 prep of,frame
R128 T258 T259 nummod 580,acids
R129 T259 T257 pobj acids,of
R130 T260 T259 compound amino,acids
R131 T261 T254 punct ", ",frame
R132 T262 T254 prep with,frame
R133 T263 T264 det a,length
R134 T264 T262 pobj length,with
R135 T265 T264 compound transcript,length
R136 T266 T264 prep of,length
R137 T267 T268 advmod approximately,2
R138 T268 T269 nummod 2,kb
R139 T269 T266 pobj kb,of
R140 T270 T264 acl encoded,length
R141 T271 T270 agent by,encoded
R142 T272 T273 nummod 14,exons
R143 T273 T271 pobj exons,by
R144 T274 T254 punct ", ",frame
R145 T275 T254 amod similar,frame
R146 T276 T275 prep to,similar
R147 T277 T278 poss its,counterpart
R148 T278 T276 pobj counterpart,to
R149 T279 T278 amod human,counterpart
R150 T280 T245 punct .,maps
R151 T282 T283 det The,transcript
R152 T283 T284 nsubj transcript,encodes
R153 T285 T286 dep that,results
R154 T286 T283 relcl results,transcript
R155 T287 T286 prep from,results
R156 T288 T289 npadvmod murine,specific
R157 T289 T290 amod specific,splicing
R158 T290 T287 pobj splicing,from
R159 T291 T290 amod alternative,splicing
R160 T292 T293 det a,protein
R162 T294 T295 nummod 611,acid
R163 T295 T293 compound acid,protein
R164 T296 T295 compound amino,acid
R165 T297 T298 dep that,differs
R166 T298 T293 relcl differs,protein
R167 T299 T298 prep at,differs
R168 T300 T301 det the,terminus
R169 T301 T299 pobj terminus,at
R170 T302 T301 compound c,terminus
R171 T303 T301 punct -,terminus
R172 T304 T284 punct .,encodes
R173 T308 T309 nsubj Mcoln1,is
R174 T310 T311 advmod highly,similar
R175 T311 T309 acomp similar,is
R176 T312 T311 prep to,similar
R177 T313 T312 pobj MCOLN1,to
R178 T314 T309 punct ", ",is
R179 T315 T316 advmod especially,in
R180 T316 T309 prep in,is
R181 T317 T318 det the,domains
R182 T318 T316 pobj domains,in
R183 T319 T318 compound transmembrane,domains
R184 T320 T318 cc and,domains
R185 T321 T322 compound ion,pore
R186 T322 T323 compound pore,region
R187 T323 T318 conj region,domains
R188 T324 T309 punct .,is
R189 T326 T327 advmod Also,conserved
R190 T328 T327 punct ", ",conserved
R191 T329 T330 det the,signal
R192 T330 T327 nsubjpass signal,conserved
R193 T331 T330 amod late,signal
R194 T332 T333 amod endosomal,lysosomal
R195 T333 T330 amod lysosomal,signal
R196 T334 T333 punct /,lysosomal
R197 T335 T330 compound targeting,signal
R198 T336 T327 auxpass is,conserved
R199 T337 T327 punct ", ",conserved
R200 T338 T327 advcl supporting,conserved
R201 T339 T340 det the,hypothesis
R202 T340 T338 dobj hypothesis,supporting
R203 T341 T342 mark that,localized
R205 T343 T344 det the,protein
R206 T344 T342 nsubjpass protein,localized
R207 T345 T342 auxpass is,localized
R208 T346 T342 prep to,localized
R209 T347 T348 det these,membranes
R210 T348 T346 pobj membranes,to
R211 T349 T348 compound vesicle,membranes
R212 T350 T327 punct .,conserved
R213 T352 T353 prep To,are
R214 T354 T352 pobj date,To
R215 T355 T353 punct ", ",are
R216 T356 T353 expl there,are
R217 T357 T358 advmod very,few
R218 T358 T359 amod few,reports
R219 T359 T353 attr reports,are
R220 T360 T359 acl describing,reports
R221 T361 T362 npadvmod species,specific
R222 T362 T364 amod specific,variants
R223 T363 T362 punct -,specific
R224 T364 T360 dobj variants,describing
R225 T365 T364 compound splice,variants
R226 T366 T353 punct .,are
R227 T368 T369 mark While,is
R229 T370 T369 nsubj identification,is
R230 T371 T370 prep of,identification
R231 T372 T371 pobj Mcoln1,of
R232 T374 T369 acomp crucial,is
R233 T375 T374 prep to,crucial
R234 T376 T377 det the,development
R235 T377 T375 pobj development,to
R236 T378 T377 prep of,development
R237 T379 T380 compound mouse,models
R238 T380 T378 pobj models,of
R239 T381 T377 prep for,development
R240 T382 T381 pobj MLIV,for
R241 T383 T373 punct ", ",suggests
R242 T384 T385 det the,fact
R243 T385 T373 nsubj fact,suggests
R244 T386 T387 mark that,are
R245 T387 T385 acl are,fact
R246 T388 T387 expl there,are
R247 T389 T390 nummod two,transcripts
R248 T390 T387 attr transcripts,are
R249 T391 T387 prep in,are
R250 T392 T391 pobj mice,in
R251 T393 T394 det an,function
R253 T395 T394 amod additional,function
R254 T396 T395 cc or,additional
R255 T397 T395 conj alternate,additional
R256 T398 T394 prep of,function
R257 T399 T400 det the,gene
R258 T400 T398 pobj gene,of
R259 T401 T402 dep that,complicate
R260 T402 T394 relcl complicate,function
R261 T403 T402 aux may,complicate
R262 T404 T405 amod phenotypic,assessment
R263 T405 T402 dobj assessment,complicate
R264 T406 T373 punct .,suggests
R35 T153 T151 pobj abnormalities,by
R92 T217 T221 nsubj genes,display
R161 T293 T284 dobj protein,encodes
R204 T342 T340 acl localized,hypothesis
R228 T369 T373 advcl is,suggests
R252 T394 T373 dobj function,suggests

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T68 46-55 GO:0030849 denotes autosomal
T69 66-75 GO:0005764 denotes lysosomal
T70 117-127 UBERON:0001016 denotes neurologic
T71 132-146 UBERON:0000970 denotes ophthalmologic
T72 180-184 SO:0000704 denotes gene
T73 186-192 PR:000010252 denotes MCOLN1
T74 237-265 _FRAGMENT denotes transient receptor potential
T75 272-286 PR:000000681 denotes cation channel
T76 267-270 _FRAGMENT denotes TRP
T77 272-278 CHEBI:36916 denotes cation
T78 355-360 NCBITaxon:10088 denotes mouse
T79 361-370 SO:0000853 denotes homologue
T80 372-378 PR:000010252 denotes Mcoln1
T81 399-405 GO:0008380 denotes splice
T82 434-440 NCBITaxon:9606 denotes humans
T83 455-460 NCBITaxon:9606 denotes human
T84 465-470 NCBITaxon:10088 denotes mouse
T85 471-476 SO:0000704 denotes genes
T86 502-509 SO:0000860 denotes synteny
T87 511-517 PR:000010252 denotes Mcoln1
T88 570-576 PR:000010252 denotes MCOLN1
T89 584-590 PR:000010252 denotes Mcoln1
T90 628-646 SO:0000236 denotes open reading frame
T91 674-684 SO:0000673 denotes transcript
T92 728-733 SO:0000147 denotes exons
T93 750-755 NCBITaxon:9606 denotes human
T94 773-783 SO:0000673 denotes transcript
T95 802-808 NCBITaxon:39107 denotes murine
T96 818-838 GO:0000380 denotes alternative splicing
T97 917-923 PR:000010252 denotes Mcoln1
T98 945-951 PR:000010252 denotes MCOLN1
T99 976-984 GO:0016020 denotes membrane
T100 985-992 SO:0000417 denotes domains
T101 997-1000 CHEBI:24870 denotes ion
T102 1024-1038 GO:0005770 denotes late endosomal
T103 1029-1038 _FRAGMENT denotes endosomal
T104 1049-1065 SO:0001529 denotes targeting signal
T105 1039-1048 GO:0005764 denotes lysosomal
T106 1039-1065 SO:0001530 denotes lysosomal targeting signal
T107 1145-1162 GO:0012506 denotes vesicle membranes
T108 1211-1218 NCBITaxon:species denotes species
T109 1228-1234 GO:0008380 denotes splice
T110 1269-1275 PR:000010252 denotes Mcoln1
T111 1309-1314 NCBITaxon:10088 denotes mouse
T112 1360-1371 SO:0000673 denotes transcripts
T113 1375-1379 NCBITaxon:10088 denotes mice
T114 1432-1436 SO:0000704 denotes gene
R1 T75 T74 _lexicallyChainedTo cation channel,transient receptor potential
R2 T75 T76 _lexicallyChainedTo cation channel,TRP
R3 T104 T103 _lexicallyChainedTo targeting signal,endosomal

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T414 46-55 GO:0030849 denotes autosomal
T415 66-75 GO:0005764 denotes lysosomal
T416 117-127 UBERON:0001016 denotes neurologic
T417 132-146 UBERON:0000970 denotes ophthalmologic
T418 180-184 SO_EXT:0000704 denotes gene
T419 186-192 PR_EXT:000010252 denotes MCOLN1
T420 237-265 _FRAGMENT denotes transient receptor potential
T421 272-286 PR_EXT:000000681 denotes cation channel
T422 247-255 GO_EXT:0004872 denotes receptor
T423 267-270 _FRAGMENT denotes TRP
T424 272-278 CHEBI:36916 denotes cation
T425 272-286 GO_EXT:0005261 denotes cation channel
T426 319-326 SO_EXT:sequence_cloning_process denotes cloning
T427 355-360 NCBITaxon:10088 denotes mouse
T428 361-370 SO_EXT:0000853 denotes homologue
T429 372-378 PR_EXT:000010252 denotes Mcoln1
T430 399-405 GO:0008380 denotes splice
T431 399-413 SO_EXT:alternative_splice_variant denotes splice variant
T432 434-440 NCBITaxon:9606 denotes humans
T433 455-460 NCBITaxon:9606 denotes human
T434 465-470 NCBITaxon:10088 denotes mouse
T435 471-476 SO_EXT:0000704 denotes genes
T436 502-509 SO:0000860 denotes synteny
T437 511-517 PR_EXT:000010252 denotes Mcoln1
T438 528-538 CHEBI_SO_EXT:amino_acid denotes amino acid
T439 547-557 CHEBI_SO_EXT:nucleotide denotes nucleotide
T440 570-576 PR_EXT:000010252 denotes MCOLN1
T441 584-590 PR_EXT:000010252 denotes Mcoln1
T442 599-609 GO_SO_EXT:chromosome denotes chromosome
T443 628-646 SO_EXT:0000236 denotes open reading frame
T444 654-665 CHEBI_SO_EXT:amino_acid denotes amino acids
T445 674-684 SO_EXT:0000673 denotes transcript
T446 712-713 CHEBI_SO_EXT:base denotes b
T447 714-721 SO_EXT:sequence_coding_function denotes encoded
T448 728-733 SO_EXT:0000147 denotes exons
T449 750-755 NCBITaxon:9606 denotes human
T450 773-783 SO_EXT:0000673 denotes transcript
T451 802-808 NCBITaxon:39107 denotes murine
T452 818-838 GO:0000380 denotes alternative splicing
T453 839-846 SO_EXT:sequence_coding_function denotes encodes
T454 853-863 CHEBI_SO_EXT:amino_acid denotes amino acid
T455 864-871 CHEBI_PR_EXT:protein denotes protein
T456 892-902 CHEBI_SO_EXT:C_terminus_or_C_terminal_region denotes c-terminus
T457 917-923 PR_EXT:000010252 denotes Mcoln1
T458 945-951 PR_EXT:000010252 denotes MCOLN1
T459 976-984 GO:0016020 denotes membrane
T460 985-992 SO_EXT:0000417 denotes domains
T461 997-1000 CHEBI:24870 denotes ion
T462 997-1005 GO_EXT:0005216 denotes ion pore
T463 1024-1038 GO:0005770 denotes late endosomal
T464 1029-1038 _FRAGMENT denotes endosomal
T465 1049-1065 SO_EXT:0001529 denotes targeting signal
T466 1039-1048 GO:0005764 denotes lysosomal
T467 1039-1065 SO_EXT:0001530 denotes lysosomal targeting signal
T468 1049-1058 GO_EXT:biological_routing_or_transport denotes targeting
T469 1069-1078 SO_EXT:biological_conservation_process_or_quality denotes conserved
T470 1115-1122 CHEBI_PR_EXT:protein denotes protein
T471 1126-1135 GO_PATO_EXT:biological_localization_process_or_quality denotes localized
T472 1145-1162 GO:0012506 denotes vesicle membranes
T473 1211-1218 NCBITaxon:species denotes species
T474 1228-1234 GO:0008380 denotes splice
T475 1228-1243 SO_EXT:alternative_splice_variant denotes splice variants
T476 1269-1275 PR_EXT:000010252 denotes Mcoln1
T477 1309-1314 NCBITaxon:10088 denotes mouse
T478 1360-1371 SO_EXT:0000673 denotes transcripts
T479 1375-1379 NCBITaxon:10088 denotes mice
T480 1432-1436 SO_EXT:0000704 denotes gene
R265 T421 T420 _lexicallyChainedTo cation channel,transient receptor potential
R266 T421 T423 _lexicallyChainedTo cation channel,TRP
R267 T465 T464 _lexicallyChainedTo targeting signal,endosomal