PMC:8275577 / 8294-9260 JSONTXT

{"target":"http://pubannotation.org/docs/sourcedb/PMC/sourceid/8275577","sourcedb":"PMC","sourceid":"8275577","source_url":"https://www.ncbi.nlm.nih.gov/pmc/8275577","text":"In the network of R. acuminatus, the most common haplotype (named Rac1 in online supplementary Table S1) was found in northern Cambodia, southern Laos, eastern Thailand and southern Vietnam, indicating recent gene flow among these populations. Since a virus related to SARS-CoV-2 (91.8% of genome identity), named RacCS203, was detected in five R. acuminatus bats caught in eastern Thailand in June 20206, the genetic pattern obtained for this species suggests that viruses closely related to RacCS203 may have circulated in most southern regions of mainland Southeast Asia. In contrast, R. acuminatus bats collected in Borneo (M5) showed a divergent haplotype (separated by 12 mutations; haplogroup II), suggesting that the South China Sea between mainland Southeast Asia and Borneo constitutes a barrier to gene flow. 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