PMC:7799378 / 21783-24021 JSONTXT

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    LitCovid-PubTator

    {"project":"LitCovid-PubTator","denotations":[{"id":"864","span":{"begin":20,"end":35},"obj":"Disease"},{"id":"865","span":{"begin":40,"end":48},"obj":"Disease"},{"id":"877","span":{"begin":111,"end":115},"obj":"Gene"},{"id":"878","span":{"begin":119,"end":125},"obj":"Species"},{"id":"879","span":{"begin":382,"end":390},"obj":"Species"},{"id":"880","span":{"begin":65,"end":73},"obj":"Disease"},{"id":"881","span":{"begin":209,"end":217},"obj":"Disease"},{"id":"882","span":{"begin":290,"end":305},"obj":"Disease"},{"id":"883","span":{"begin":355,"end":363},"obj":"Disease"},{"id":"884","span":{"begin":367,"end":381},"obj":"Disease"},{"id":"885","span":{"begin":399,"end":414},"obj":"Disease"},{"id":"886","span":{"begin":599,"end":614},"obj":"Disease"},{"id":"887","span":{"begin":647,"end":655},"obj":"Disease"},{"id":"908","span":{"begin":1739,"end":1743},"obj":"Gene"},{"id":"909","span":{"begin":721,"end":729},"obj":"Species"},{"id":"910","span":{"begin":804,"end":812},"obj":"Species"},{"id":"911","span":{"begin":1263,"end":1271},"obj":"Species"},{"id":"912","span":{"begin":735,"end":743},"obj":"Disease"},{"id":"913","span":{"begin":791,"end":800},"obj":"Disease"},{"id":"914","span":{"begin":818,"end":826},"obj":"Disease"},{"id":"915","span":{"begin":851,"end":859},"obj":"Disease"},{"id":"916","span":{"begin":878,"end":887},"obj":"Disease"},{"id":"917","span":{"begin":993,"end":1001},"obj":"Disease"},{"id":"918","span":{"begin":1003,"end":1015},"obj":"Disease"},{"id":"919","span":{"begin":1021,"end":1028},"obj":"Disease"},{"id":"920","span":{"begin":1044,"end":1053},"obj":"Disease"},{"id":"921","span":{"begin":1126,"end":1147},"obj":"Disease"},{"id":"922","span":{"begin":1249,"end":1257},"obj":"Disease"},{"id":"923","span":{"begin":1499,"end":1515},"obj":"Disease"},{"id":"924","span":{"begin":1545,"end":1559},"obj":"Disease"},{"id":"925","span":{"begin":1602,"end":1610},"obj":"Disease"},{"id":"926","span":{"begin":1639,"end":1647},"obj":"Disease"},{"id":"927","span":{"begin":1660,"end":1675},"obj":"Disease"},{"id":"938","span":{"begin":1996,"end":2000},"obj":"Gene"},{"id":"939","span":{"begin":1947,"end":1951},"obj":"Chemical"},{"id":"940","span":{"begin":1956,"end":1970},"obj":"Chemical"},{"id":"941","span":{"begin":2055,"end":2064},"obj":"Chemical"},{"id":"942","span":{"begin":2069,"end":2079},"obj":"Chemical"},{"id":"943","span":{"begin":1808,"end":1816},"obj":"Disease"},{"id":"944","span":{"begin":1876,"end":1884},"obj":"Disease"},{"id":"945","span":{"begin":1892,"end":1906},"obj":"Disease"},{"id":"946","span":{"begin":2171,"end":2191},"obj":"Disease"},{"id":"947","span":{"begin":2199,"end":2213},"obj":"Disease"}],"attributes":[{"id":"A946","pred":"tao:has_database_id","subj":"946","obj":"MESH:C000657245"},{"id":"A882","pred":"tao:has_database_id","subj":"882","obj":"MESH:D005955"},{"id":"A915","pred":"tao:has_database_id","subj":"915","obj":"MESH:C000657245"},{"id":"A917","pred":"tao:has_database_id","subj":"917","obj":"MESH:D003920"},{"id":"A923","pred":"tao:has_database_id","subj":"923","obj":"MESH:D001102"},{"id":"A942","pred":"tao:has_database_id","subj":"942","obj":"MESH:D003545"},{"id":"A943","pred":"tao:has_database_id","subj":"943","obj":"MESH:C000657245"},{"id":"A878","pred":"tao:has_database_id","subj":"878","obj":"Tax:9606"},{"id":"A885","pred":"tao:has_database_id","subj":"885","obj":"MESH:D005955"},{"id":"A945","pred":"tao:has_database_id","subj":"945","obj":"MESH:D005955"},{"id":"A865","pred":"tao:has_database_id","subj":"865","obj":"MESH:C000657245"},{"id":"A921","pred":"tao:has_database_id","subj":"921","obj":"MESH:D018352"},{"id":"A918","pred":"tao:has_database_id","subj":"918","obj":"MESH:D006973"},{"id":"A883","pred":"tao:has_database_id","subj":"883","obj":"MESH:C000657245"},{"id":"A926","pred":"tao:has_database_id","subj":"926","obj":"MESH:C000657245"},{"id":"A927","pred":"tao:has_database_id","subj":"927","obj":"MESH:D005955"},{"id":"A911","pred":"tao:has_database_id","subj":"911","obj":"Tax:694009"},{"id":"A940","pred":"tao:has_database_id","subj":"940","obj":"MESH:D008054"},{"id":"A877","pred":"tao:has_database_id","subj":"877","obj":"Gene:2539"},{"id":"A916","pred":"tao:has_database_id","subj":"916","obj":"MESH:D003643"},{"id":"A910","pred":"tao:has_database_id","subj":"910","obj":"Tax:9606"},{"id":"A881","pred":"tao:has_database_id","subj":"881","obj":"MESH:C000657245"},{"id":"A939","pred":"tao:has_database_id","subj":"939","obj":"MESH:D019803"},{"id":"A886","pred":"tao:has_database_id","subj":"886","obj":"MESH:D005955"},{"id":"A912","pred":"tao:has_database_id","subj":"912","obj":"MESH:C000657245"},{"id":"A919","pred":"tao:has_database_id","subj":"919","obj":"MESH:D009765"},{"id":"A925","pred":"tao:has_database_id","subj":"925","obj":"MESH:C000657245"},{"id":"A922","pred":"tao:has_database_id","subj":"922","obj":"MESH:D007239"},{"id":"A913","pred":"tao:has_database_id","subj":"913","obj":"MESH:D003643"},{"id":"A914","pred":"tao:has_database_id","subj":"914","obj":"MESH:C000657245"},{"id":"A947","pred":"tao:has_database_id","subj":"947","obj":"MESH:D005955"},{"id":"A864","pred":"tao:has_database_id","subj":"864","obj":"MESH:D005955"},{"id":"A884","pred":"tao:has_database_id","subj":"884","obj":"MESH:D005955"},{"id":"A944","pred":"tao:has_database_id","subj":"944","obj":"MESH:C000657245"},{"id":"A908","pred":"tao:has_database_id","subj":"908","obj":"Gene:2539"},{"id":"A941","pred":"tao:has_database_id","subj":"941","obj":"MESH:D014807"},{"id":"A938","pred":"tao:has_database_id","subj":"938","obj":"Gene:2539"},{"id":"A920","pred":"tao:has_database_id","subj":"920","obj":"MESH:D003643"},{"id":"A879","pred":"tao:has_database_id","subj":"879","obj":"Tax:9606"},{"id":"A909","pred":"tao:has_database_id","subj":"909","obj":"Tax:9606"},{"id":"A924","pred":"tao:has_database_id","subj":"924","obj":"MESH:D005955"},{"id":"A887","pred":"tao:has_database_id","subj":"887","obj":"MESH:C000657245"},{"id":"A880","pred":"tao:has_database_id","subj":"880","obj":"MESH:C000657245"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Interaction between G6PD deficiency and COVID-19\nThe severity of COVID-19 is influenced by genetic variants of G6PD in humans, which is related to an impaired immune response [111]. It has been predicted that COVID-19 will spread more widely in areas or countries with a high prevalence of G6PD deficiency. This concern poses a serious challenge to treat COVID-19 in G6PD-deficient patients. Severe G6PD deficiency is associated with an altered immune response, including NET formation, inflammasome activation, and bactericidal activity as well as an antiviral response [9–11,42,85,95,110]. Hence, G6PD deficiency presents a challenge during the COVID-19 pandemic.\nSeveral factors can influence the clinical severity in patients with COVID-19. Age is associated with elevated morbidity and mortality in patients with COVID-19 [112]. The elderly with COVID-19 (32%) have higher mortality rates compared with the middle-aged and the young [113]. The elderly with coexisting conditions, such as diabetes, hypertension, and obesity increase their mortality risk five-fold [114]. Oxidative stress and aging go hand in hand during coronavirus infection. Aging not only affects the immune response, but also induces a pro-inflammatory state. Aged-animals infected with SARS-CoV display more severe lesions and an increased pro-inflammatory response than their young counterparts [115]. This indicates that the age-associated accumulation of oxidative stress and a reduced antioxidative defense can worsen viral infections [116]. It is speculated that G6PD-deficient variants enhance the clinical severity of COVID-19. Hence, in the elderly with COVID-19, those with G6PD deficiency may become more anaemic than those with the normal activity of G6PD [117,118].\nOne of risk factors leading to a higher incidence of COVID-19 is ethnicity. African-Americans have a higher incidence of COVID-19 [119]. G6PD-deficient African Americans have higher levels of GSSG and lipid peroxide in the blood compared to G6PD-normal African Americans [120]. Co-supplementation of vitamin D and L-cysteine has been recommended for the increased oxidative stress and an impaired immune response in SARS-CoV-2 infection for in G6PD-deficient African-Americans [121]."}

    LitCovid-sentences

    {"project":"LitCovid-sentences","denotations":[{"id":"T174","span":{"begin":0,"end":48},"obj":"Sentence"},{"id":"T175","span":{"begin":49,"end":181},"obj":"Sentence"},{"id":"T176","span":{"begin":182,"end":306},"obj":"Sentence"},{"id":"T177","span":{"begin":307,"end":391},"obj":"Sentence"},{"id":"T178","span":{"begin":392,"end":591},"obj":"Sentence"},{"id":"T179","span":{"begin":592,"end":665},"obj":"Sentence"},{"id":"T180","span":{"begin":666,"end":744},"obj":"Sentence"},{"id":"T181","span":{"begin":745,"end":833},"obj":"Sentence"},{"id":"T182","span":{"begin":834,"end":944},"obj":"Sentence"},{"id":"T183","span":{"begin":945,"end":1075},"obj":"Sentence"},{"id":"T184","span":{"begin":1076,"end":1148},"obj":"Sentence"},{"id":"T185","span":{"begin":1149,"end":1235},"obj":"Sentence"},{"id":"T186","span":{"begin":1236,"end":1379},"obj":"Sentence"},{"id":"T187","span":{"begin":1380,"end":1522},"obj":"Sentence"},{"id":"T188","span":{"begin":1523,"end":1611},"obj":"Sentence"},{"id":"T189","span":{"begin":1612,"end":1754},"obj":"Sentence"},{"id":"T190","span":{"begin":1755,"end":1830},"obj":"Sentence"},{"id":"T191","span":{"begin":1831,"end":1891},"obj":"Sentence"},{"id":"T192","span":{"begin":1892,"end":2032},"obj":"Sentence"},{"id":"T193","span":{"begin":2033,"end":2238},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Interaction between G6PD deficiency and COVID-19\nThe severity of COVID-19 is influenced by genetic variants of G6PD in humans, which is related to an impaired immune response [111]. It has been predicted that COVID-19 will spread more widely in areas or countries with a high prevalence of G6PD deficiency. This concern poses a serious challenge to treat COVID-19 in G6PD-deficient patients. Severe G6PD deficiency is associated with an altered immune response, including NET formation, inflammasome activation, and bactericidal activity as well as an antiviral response [9–11,42,85,95,110]. Hence, G6PD deficiency presents a challenge during the COVID-19 pandemic.\nSeveral factors can influence the clinical severity in patients with COVID-19. Age is associated with elevated morbidity and mortality in patients with COVID-19 [112]. The elderly with COVID-19 (32%) have higher mortality rates compared with the middle-aged and the young [113]. The elderly with coexisting conditions, such as diabetes, hypertension, and obesity increase their mortality risk five-fold [114]. Oxidative stress and aging go hand in hand during coronavirus infection. Aging not only affects the immune response, but also induces a pro-inflammatory state. Aged-animals infected with SARS-CoV display more severe lesions and an increased pro-inflammatory response than their young counterparts [115]. This indicates that the age-associated accumulation of oxidative stress and a reduced antioxidative defense can worsen viral infections [116]. It is speculated that G6PD-deficient variants enhance the clinical severity of COVID-19. Hence, in the elderly with COVID-19, those with G6PD deficiency may become more anaemic than those with the normal activity of G6PD [117,118].\nOne of risk factors leading to a higher incidence of COVID-19 is ethnicity. African-Americans have a higher incidence of COVID-19 [119]. G6PD-deficient African Americans have higher levels of GSSG and lipid peroxide in the blood compared to G6PD-normal African Americans [120]. Co-supplementation of vitamin D and L-cysteine has been recommended for the increased oxidative stress and an impaired immune response in SARS-CoV-2 infection for in G6PD-deficient African-Americans [121]."}

    LitCovid-PD-HP

    {"project":"LitCovid-PD-HP","denotations":[{"id":"T38","span":{"begin":1003,"end":1015},"obj":"Phenotype"},{"id":"T39","span":{"begin":1021,"end":1028},"obj":"Phenotype"},{"id":"T40","span":{"begin":1076,"end":1092},"obj":"Phenotype"},{"id":"T41","span":{"begin":1435,"end":1451},"obj":"Phenotype"},{"id":"T42","span":{"begin":2119,"end":2135},"obj":"Phenotype"}],"attributes":[{"id":"A38","pred":"hp_id","subj":"T38","obj":"http://purl.obolibrary.org/obo/HP_0000822"},{"id":"A39","pred":"hp_id","subj":"T39","obj":"http://purl.obolibrary.org/obo/HP_0001513"},{"id":"A40","pred":"hp_id","subj":"T40","obj":"http://purl.obolibrary.org/obo/HP_0025464"},{"id":"A41","pred":"hp_id","subj":"T41","obj":"http://purl.obolibrary.org/obo/HP_0025464"},{"id":"A42","pred":"hp_id","subj":"T42","obj":"http://purl.obolibrary.org/obo/HP_0025464"}],"text":"Interaction between G6PD deficiency and COVID-19\nThe severity of COVID-19 is influenced by genetic variants of G6PD in humans, which is related to an impaired immune response [111]. It has been predicted that COVID-19 will spread more widely in areas or countries with a high prevalence of G6PD deficiency. This concern poses a serious challenge to treat COVID-19 in G6PD-deficient patients. Severe G6PD deficiency is associated with an altered immune response, including NET formation, inflammasome activation, and bactericidal activity as well as an antiviral response [9–11,42,85,95,110]. Hence, G6PD deficiency presents a challenge during the COVID-19 pandemic.\nSeveral factors can influence the clinical severity in patients with COVID-19. Age is associated with elevated morbidity and mortality in patients with COVID-19 [112]. The elderly with COVID-19 (32%) have higher mortality rates compared with the middle-aged and the young [113]. The elderly with coexisting conditions, such as diabetes, hypertension, and obesity increase their mortality risk five-fold [114]. Oxidative stress and aging go hand in hand during coronavirus infection. Aging not only affects the immune response, but also induces a pro-inflammatory state. Aged-animals infected with SARS-CoV display more severe lesions and an increased pro-inflammatory response than their young counterparts [115]. This indicates that the age-associated accumulation of oxidative stress and a reduced antioxidative defense can worsen viral infections [116]. It is speculated that G6PD-deficient variants enhance the clinical severity of COVID-19. Hence, in the elderly with COVID-19, those with G6PD deficiency may become more anaemic than those with the normal activity of G6PD [117,118].\nOne of risk factors leading to a higher incidence of COVID-19 is ethnicity. African-Americans have a higher incidence of COVID-19 [119]. G6PD-deficient African Americans have higher levels of GSSG and lipid peroxide in the blood compared to G6PD-normal African Americans [120]. Co-supplementation of vitamin D and L-cysteine has been recommended for the increased oxidative stress and an impaired immune response in SARS-CoV-2 infection for in G6PD-deficient African-Americans [121]."}