PMC:7797241 / 14823-15728 JSONTXT

{"project":"LitCovid-PubTator","denotations":[{"id":"139","span":{"begin":258,"end":264},"obj":"Disease"},{"id":"140","span":{"begin":322,"end":330},"obj":"Disease"},{"id":"141","span":{"begin":379,"end":387},"obj":"Disease"},{"id":"142","span":{"begin":396,"end":402},"obj":"Disease"},{"id":"143","span":{"begin":552,"end":561},"obj":"Disease"},{"id":"144","span":{"begin":614,"end":622},"obj":"Disease"},{"id":"145","span":{"begin":631,"end":637},"obj":"Disease"},{"id":"146","span":{"begin":712,"end":720},"obj":"Disease"},{"id":"147","span":{"begin":721,"end":727},"obj":"Disease"},{"id":"148","span":{"begin":833,"end":842},"obj":"Disease"},{"id":"149","span":{"begin":886,"end":892},"obj":"Disease"}],"attributes":[{"id":"A139","pred":"tao:has_database_id","subj":"139","obj":"MESH:D003643"},{"id":"A140","pred":"tao:has_database_id","subj":"140","obj":"MESH:C000657245"},{"id":"A141","pred":"tao:has_database_id","subj":"141","obj":"MESH:C000657245"},{"id":"A142","pred":"tao:has_database_id","subj":"142","obj":"MESH:D003643"},{"id":"A143","pred":"tao:has_database_id","subj":"143","obj":"MESH:D003643"},{"id":"A144","pred":"tao:has_database_id","subj":"144","obj":"MESH:C000657245"},{"id":"A145","pred":"tao:has_database_id","subj":"145","obj":"MESH:D003643"},{"id":"A146","pred":"tao:has_database_id","subj":"146","obj":"MESH:C000657245"},{"id":"A147","pred":"tao:has_database_id","subj":"147","obj":"MESH:D003643"},{"id":"A148","pred":"tao:has_database_id","subj":"148","obj":"MESH:D003643"},{"id":"A149","pred":"tao:has_database_id","subj":"149","obj":"MESH:D003643"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Model parameters are detailed in table 1. We used available published literature to inform parameter estimates. We used the following publicly available metrics for model fitting: regional cumulative cases in SW (tested and confirmed cases in hospital), and deaths (daily/cumulative counts) from the Public Health England COVID-19 dashboard,14 and ONS weekly provisional data on COVID-19-related deaths.25 The case data are finalised prior to the previous 5 days, so we include all data until 14 May 2020, based on data reported until 18 May 2020. The mortality data from ONS do not explicitly state the number of COVID-19-related deaths occurring in hospital, but they do report this value nationally (83.9% of COVID-19 deaths in hospital, as of 17 April 2020). We assume that this percentage applies to the SW data and rescale the mortality to 83.9% to represent an estimate of total deaths in hospital."}

{"project":"LitCovid-sentences","denotations":[{"id":"T93","span":{"begin":0,"end":41},"obj":"Sentence"},{"id":"T94","span":{"begin":42,"end":111},"obj":"Sentence"},{"id":"T95","span":{"begin":112,"end":547},"obj":"Sentence"},{"id":"T96","span":{"begin":548,"end":762},"obj":"Sentence"},{"id":"T97","span":{"begin":763,"end":905},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Model parameters are detailed in table 1. We used available published literature to inform parameter estimates. We used the following publicly available metrics for model fitting: regional cumulative cases in SW (tested and confirmed cases in hospital), and deaths (daily/cumulative counts) from the Public Health England COVID-19 dashboard,14 and ONS weekly provisional data on COVID-19-related deaths.25 The case data are finalised prior to the previous 5 days, so we include all data until 14 May 2020, based on data reported until 18 May 2020. The mortality data from ONS do not explicitly state the number of COVID-19-related deaths occurring in hospital, but they do report this value nationally (83.9% of COVID-19 deaths in hospital, as of 17 April 2020). We assume that this percentage applies to the SW data and rescale the mortality to 83.9% to represent an estimate of total deaths in hospital."}