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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
675 14-33 Disease denotes Cardiac arrhythmias MESH:D001145
676 105-113 Disease denotes COVID-19 MESH:C000657245
677 123-145 Disease denotes cardiovascular disease MESH:D002318
678 199-210 Disease denotes arrhythmias MESH:D001145
679 212-222 Disease denotes Arrhythmia MESH:D001145
680 282-299 Disease denotes myocardial injury MESH:D009202
681 361-370 Disease denotes mortality MESH:D003643
687 833-840 Species denotes patient Tax:9606
688 599-610 Disease denotes arrhythmias MESH:D001145
689 634-642 Disease denotes COVID-19 MESH:C000657245
690 764-775 Disease denotes arrhythmias MESH:D001145
691 824-832 Disease denotes COVID-19 MESH:C000657245
707 992-1000 Species denotes patients Tax:9606
708 1241-1249 Species denotes patients Tax:9606
709 1284-1291 Species denotes patient Tax:9606
710 1158-1167 Species denotes influenza Tax:11309
711 900-902 Disease denotes AF MESH:D001281
712 932-942 Disease denotes arrhythmia MESH:D001145
713 1033-1043 Disease denotes arrhythmia MESH:D001145
714 1066-1068 Disease denotes AF MESH:D001281
715 1114-1142 Disease denotes respiratory virus infections
716 1232-1240 Disease denotes COVID-19 MESH:C000657245
717 1322-1324 Disease denotes AF MESH:D001281
718 1396-1413 Disease denotes myocardial injury MESH:D009202
719 1555-1563 Disease denotes COVID-19 MESH:C000657245
720 1586-1588 Disease denotes AF MESH:D001281
721 1693-1712 Disease denotes atrial fibrillation MESH:D001281
746 2211-2219 Species denotes patients Tax:9606
747 2335-2343 Species denotes patients Tax:9606
748 2535-2543 Species denotes patients Tax:9606
749 2984-2992 Species denotes patients Tax:9606
750 3105-3113 Species denotes patients Tax:9606
751 2400-2418 Chemical denotes hydroxychloroquine MESH:D006886
752 2423-2435 Chemical denotes azithromycin MESH:D017963
753 2702-2720 Chemical denotes hydroxychloroquine MESH:D006886
754 2781-2793 Chemical denotes azithromycin MESH:D017963
755 3123-3126 Chemical denotes QTc
756 1752-1762 Disease denotes arrhythmia MESH:D001145
757 1800-1808 Disease denotes COVID-19 MESH:C000657245
758 1845-1867 Disease denotes cardiovascular disease MESH:D002318
759 1908-1918 Disease denotes arrhythmia MESH:D001145
760 2015-2025 Disease denotes arrhythmia MESH:D001145
761 2077-2096 Disease denotes infectious diseases MESH:D003141
762 2225-2235 Disease denotes arrhythmia MESH:D001145
763 2666-2698 Disease denotes prolongation of the QTc interval MESH:D008133
764 2724-2732 Disease denotes COVID-19 MESH:C000657245
765 2843-2865 Disease denotes ventricular arrhythmia MESH:D001145
766 2920-2940 Disease denotes torsades des pointes MESH:D016171
767 2998-3021 Disease denotes ventricular arrhythmias MESH:D001145
768 3035-3057 Disease denotes cardiovascular disease MESH:D002318
769 3222-3245 Disease denotes ventricular arrhythmias MESH:D001145
792 3421-3425 Gene denotes IL-6 Gene:3569
793 4260-4264 Gene denotes IL-6 Gene:3569
794 3314-3322 Species denotes Patients Tax:9606
795 3823-3831 Species denotes patients Tax:9606
796 4268-4276 Species denotes patients Tax:9606
797 4658-4665 Species denotes patient Tax:9606
798 3701-3707 Chemical denotes oxygen MESH:D010100
799 3913-3919 Chemical denotes oxygen MESH:D010100
800 3328-3339 Disease denotes arrhythmias MESH:D001145
801 3427-3444 Disease denotes Myocardial injury MESH:D009202
802 3448-3456 Disease denotes COVID-19 MESH:C000657245
803 3579-3589 Disease denotes arrhythmia MESH:D001145
804 3850-3872 Disease denotes cardiovascular disease MESH:D002318
805 3946-3956 Disease denotes arrhythmia MESH:D001145
806 3977-3994 Disease denotes myocardial injury MESH:D009202
807 3998-4006 Disease denotes ischemia MESH:D007511
808 4057-4079 Disease denotes cardiovascular disease MESH:D002318
809 4282-4293 Disease denotes arrhythmias MESH:D001145
810 4312-4320 Disease denotes COVID-19 MESH:C000657245
811 4396-4415 Disease denotes respiratory failure MESH:D012131
812 4420-4437 Disease denotes myocardial injury MESH:D009202
813 4537-4547 Disease denotes arrhythmia MESH:D001145
817 5246-5252 Chemical denotes oxygen MESH:D010100
818 4946-4956 Disease denotes arrhythmia MESH:D001145
819 5460-5477 Disease denotes cardia arrhythmia MESH:D001145
833 5761-5769 Species denotes patients Tax:9606
834 6173-6181 Species denotes patients Tax:9606
835 6366-6374 Species denotes patients Tax:9606
836 5585-5596 Disease denotes arrhythmias MESH:D001145
837 5631-5653 Disease denotes cardiovascular disease MESH:D002318
838 5784-5794 Disease denotes arrhythmia MESH:D001145
839 5949-5959 Disease denotes arrhythmia MESH:D001145
840 5963-5971 Disease denotes COVID-19 MESH:C000657245
841 6055-6063 Disease denotes COVID-19 MESH:C000657245
842 6187-6206 Disease denotes atrial fibrillation MESH:D001281
843 6227-6250 Disease denotes ventricular arrhythmias MESH:D001145
844 6260-6288 Disease denotes supraventricular arrhythmias MESH:D001145
845 6357-6365 Disease denotes COVID-19 MESH:C000657245
856 6977-6987 Species denotes SARS-CoV-2 Tax:2697049
857 6376-6386 Disease denotes Arrhythmia MESH:D001145
858 6414-6422 Disease denotes COVID-19 MESH:C000657245
859 6465-6474 Disease denotes mortality MESH:D003643
860 6558-6580 Disease denotes cardiovascular disease MESH:D002318
861 6633-6651 Disease denotes cardiac arrhythmia MESH:D001145
862 6727-6746 Disease denotes respiratory failure MESH:D012131
863 6854-6859 Disease denotes death MESH:D003643
864 6863-6871 Disease denotes COVID-19 MESH:C000657245
865 6962-6971 Disease denotes infection MESH:D007239
871 7487-7495 Species denotes patients Tax:9606
872 7323-7333 Disease denotes arrhythmia MESH:D001145
873 7369-7379 Disease denotes arrhythmic MESH:D001145
874 7472-7483 Disease denotes arrhythmias MESH:D001145
875 7586-7597 Disease denotes arrhythmias MESH:D001145
878 8189-8197 Species denotes patients Tax:9606
879 8257-8265 Species denotes patients Tax:9606
891 8969-8977 Species denotes Patients Tax:9606
892 9238-9246 Species denotes patients Tax:9606
893 9779-9787 Species denotes patients Tax:9606
894 10219-10227 Species denotes patients Tax:9606
895 9555-9573 Chemical denotes hydroxochloroquine
896 8959-8967 Disease denotes COVID-19 MESH:C000657245
897 9539-9547 Disease denotes COVID-19 MESH:C000657245
898 9707-9717 Disease denotes arrhythmia MESH:D001145
899 9977-9987 Disease denotes arrhythmia MESH:D001145
900 10015-10023 Disease denotes COVID-19 MESH:C000657245
901 10210-10218 Disease denotes COVID-19 MESH:C000657245

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T164 14-33 Phenotype denotes Cardiac arrhythmias http://purl.obolibrary.org/obo/HP_0011675
T165 123-145 Phenotype denotes cardiovascular disease http://purl.obolibrary.org/obo/HP_0001626
T166 199-210 Phenotype denotes arrhythmias http://purl.obolibrary.org/obo/HP_0011675
T167 212-222 Phenotype denotes Arrhythmia http://purl.obolibrary.org/obo/HP_0011675
T168 599-610 Phenotype denotes arrhythmias http://purl.obolibrary.org/obo/HP_0011675
T169 764-775 Phenotype denotes arrhythmias http://purl.obolibrary.org/obo/HP_0011675
T170 900-902 Phenotype denotes AF http://purl.obolibrary.org/obo/HP_0005110
T171 932-942 Phenotype denotes arrhythmia http://purl.obolibrary.org/obo/HP_0011675
T172 1033-1043 Phenotype denotes arrhythmia http://purl.obolibrary.org/obo/HP_0011675
T173 1066-1068 Phenotype denotes AF http://purl.obolibrary.org/obo/HP_0005110
T174 1322-1324 Phenotype denotes AF http://purl.obolibrary.org/obo/HP_0005110
T175 1586-1588 Phenotype denotes AF http://purl.obolibrary.org/obo/HP_0005110
T176 1693-1712 Phenotype denotes atrial fibrillation http://purl.obolibrary.org/obo/HP_0005110
T177 1752-1762 Phenotype denotes arrhythmia http://purl.obolibrary.org/obo/HP_0011675
T178 1845-1867 Phenotype denotes cardiovascular disease http://purl.obolibrary.org/obo/HP_0001626
T179 1908-1918 Phenotype denotes arrhythmia http://purl.obolibrary.org/obo/HP_0011675
T180 2015-2025 Phenotype denotes arrhythmia http://purl.obolibrary.org/obo/HP_0011675
T181 2225-2235 Phenotype denotes arrhythmia http://purl.obolibrary.org/obo/HP_0011675
T182 2843-2865 Phenotype denotes ventricular arrhythmia http://purl.obolibrary.org/obo/HP_0004308
T183 2998-3021 Phenotype denotes ventricular arrhythmias http://purl.obolibrary.org/obo/HP_0004308
T184 3035-3057 Phenotype denotes cardiovascular disease http://purl.obolibrary.org/obo/HP_0001626
T185 3222-3245 Phenotype denotes ventricular arrhythmias http://purl.obolibrary.org/obo/HP_0004308
T186 3328-3339 Phenotype denotes arrhythmias http://purl.obolibrary.org/obo/HP_0011675
T187 3579-3589 Phenotype denotes arrhythmia http://purl.obolibrary.org/obo/HP_0011675
T188 3850-3872 Phenotype denotes cardiovascular disease http://purl.obolibrary.org/obo/HP_0001626
T189 3946-3956 Phenotype denotes arrhythmia http://purl.obolibrary.org/obo/HP_0011675
T190 4057-4079 Phenotype denotes cardiovascular disease http://purl.obolibrary.org/obo/HP_0001626
T191 4282-4293 Phenotype denotes arrhythmias http://purl.obolibrary.org/obo/HP_0011675
T192 4396-4415 Phenotype denotes respiratory failure http://purl.obolibrary.org/obo/HP_0002878
T193 4537-4547 Phenotype denotes arrhythmia http://purl.obolibrary.org/obo/HP_0011675
T194 4946-4956 Phenotype denotes arrhythmia http://purl.obolibrary.org/obo/HP_0011675
T195 5467-5477 Phenotype denotes arrhythmia http://purl.obolibrary.org/obo/HP_0011675
T196 5585-5596 Phenotype denotes arrhythmias http://purl.obolibrary.org/obo/HP_0011675
T197 5631-5653 Phenotype denotes cardiovascular disease http://purl.obolibrary.org/obo/HP_0001626
T198 5784-5794 Phenotype denotes arrhythmia http://purl.obolibrary.org/obo/HP_0011675
T199 5949-5959 Phenotype denotes arrhythmia http://purl.obolibrary.org/obo/HP_0011675
T200 6187-6206 Phenotype denotes atrial fibrillation http://purl.obolibrary.org/obo/HP_0005110
T201 6227-6250 Phenotype denotes ventricular arrhythmias http://purl.obolibrary.org/obo/HP_0004308
T202 6260-6288 Phenotype denotes supraventricular arrhythmias http://purl.obolibrary.org/obo/HP_0005115
T203 6376-6386 Phenotype denotes Arrhythmia http://purl.obolibrary.org/obo/HP_0011675
T204 6558-6580 Phenotype denotes cardiovascular disease http://purl.obolibrary.org/obo/HP_0001626
T205 6633-6651 Phenotype denotes cardiac arrhythmia http://purl.obolibrary.org/obo/HP_0011675
T206 6727-6746 Phenotype denotes respiratory failure http://purl.obolibrary.org/obo/HP_0002878
T207 7323-7333 Phenotype denotes arrhythmia http://purl.obolibrary.org/obo/HP_0011675
T208 7472-7483 Phenotype denotes arrhythmias http://purl.obolibrary.org/obo/HP_0011675
T209 7586-7597 Phenotype denotes arrhythmias http://purl.obolibrary.org/obo/HP_0011675
T210 9707-9717 Phenotype denotes arrhythmia http://purl.obolibrary.org/obo/HP_0011675
T211 9977-9987 Phenotype denotes arrhythmia http://purl.obolibrary.org/obo/HP_0011675

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T193 0-2 Sentence denotes 4.
T194 3-13 Sentence denotes Discussion
T195 14-114 Sentence denotes Cardiac arrhythmias were the most common cardiac event associated with hospitalization for COVID-19.
T196 115-211 Sentence denotes Age and cardiovascular disease were identified as risk factors for the incidence of arrhythmias.
T197 212-478 Sentence denotes Arrhythmia was associated with elevated cardiac biomarkers suggesting myocardial injury, need for ICU/IMC care and mechanical ventilation as well as mortality, and constituted an independent predictor of prolonged hospitalization and need for mechanical ventilation.
T198 479-693 Sentence denotes This is the first multicenter study including both tertiary care centers and regional hospitals focusing on the role of arrhythmias in hospitalization for COVID-19, considering both clinical and biomarker profiles.
T199 694-865 Sentence denotes With respect to age, baseline parameters and the overall incidence of arrhythmias, our cohort corresponds to previously described COVID-19 patient populations [7,8,17,20].
T200 866-1044 Sentence denotes In accordance with prior results, AF was the most common incident arrhythmia both in the entire cohort and in the subgroup of patients without any previous history of arrhythmia.
T201 1045-1255 Sentence denotes An elevated risk for AF has been described in association with other respiratory virus infections, in particular influenza [21], however, with a lower incidence compared to our cohort of COVID-19-patients [22].
T202 1256-1470 Sentence denotes The present analyses of the patient subgroup with newly diagnosed AF revealed not only a relevant increase in cardiac biomarkers hinting at myocardial injury but also significantly elevated inflammatory biomarkers.
T203 1471-1718 Sentence denotes This may point to an association between the degree of inflammatory state caused by COVID-19 and susceptibility to AF, which is in line with previous findings regarding inflammatory mechanisms promoting the development of atrial fibrillation [23].
T204 1719-1919 Sentence denotes With respect to risk factors for arrhythmia incidence during hospitalization for COVID-19, we could identify age and previous cardiovascular disease as predictors for the occurrence of any arrhythmia.
T205 1920-2102 Sentence denotes These baseline characteristics have previously been shown to predispose for the development of arrhythmia in the general population without association with infectious diseases [24].
T206 2103-2207 Sentence denotes Thus, they may reflect a subgroup of greater general susceptibility to additional proarrhythmic effects.
T207 2208-2344 Sentence denotes In patients with arrhythmia in our cohort, QTc duration was longer at admission, albeit within normal range in the majority of patients.
T208 2345-2544 Sentence denotes Dynamic changes of the QTc interval under therapy with hydroxychloroquine and azithromycin cannot be evaluated as repeated ECGs during hospital stay were not systematically available in all patients.
T209 2545-2622 Sentence denotes Thus, proarrhythmic effects of these drugs cannot be excluded in this cohort.
T210 2623-2810 Sentence denotes Previous reports point towards significant prolongation of the QTc interval by hydroxychloroquine in COVID-19 which is even more enhanced in combination with azithromycin therapy [25,26].
T211 2811-2896 Sentence denotes However, the rate of associated ventricular arrhythmia has been low in these studies.
T212 2897-3149 Sentence denotes Similarly, no typical “torsades des pointes” were seen in our cohort: in three of five patients with ventricular arrhythmias pre-existent cardiovascular disease was present, and only one of the remaining two patients received QTc-prolonging medication.
T213 3150-3313 Sentence denotes Thus, rather than induced by direct effects of administered medication, ventricular arrhythmias may have been due to other predisposing risk factors in our cohort.
T214 3314-3426 Sentence denotes Patients with arrhythmias during hospitalization showed elevated cardiac biomarkers and elevated levels of IL-6.
T215 3427-3563 Sentence denotes Myocardial injury in COVID-19 has been reported by multiple studies, however, the underlying mechanisms have yet to be elucidated [2,4].
T216 3564-3801 Sentence denotes In our cohort, arrhythmia itself may have promoted a more pronounced increase in hsTNT and NTproBNP by an additional shift in myocardial oxygen demand under a restricted respiratory function and by increasing atrial and ventricular load.
T217 3802-3957 Sentence denotes In particular, among patients with pre-existent cardiovascular disease a myocardial supply-demand-imbalance of oxygen may become evident during arrhythmia.
T218 3958-4174 Sentence denotes On the other hand, myocardial injury or ischemia-especially in the light of a higher prevalence of cardiovascular disease in this subgroup-may have exerted proarrhythmic effects in addition to the inflammatory state.
T219 4175-4308 Sentence denotes Such additional inflammatory influences are implicated by the pronounced increase in IL-6 in patients with arrhythmias in our cohort.
T220 4309-4443 Sentence denotes In COVID-19 a state of hyperinflammation is commonly observed and correlates with both respiratory failure and myocardial injury [27].
T221 4444-4674 Sentence denotes Based on our observations, it may additionally constitute a risk factor for the incidence of arrhythmia but distinct molecular mechanisms have yet to be investigated in experimental studies and larger, prospective patient cohorts.
T222 4675-4780 Sentence denotes Estimating optimal cut-off values is associated with uncertainty and is affected by the study population.
T223 4781-4884 Sentence denotes Therefore, the calculated cut-offs for the biomarkers in this study should be interpreted with caution.
T224 4885-5074 Sentence denotes With respect to clinical outcome, an association of incident arrhythmia with the need for ICU/IMC-care was identified, which is in line with the previous observations from Pennsylvania [8].
T225 5075-5205 Sentence denotes However, age and cardiac co-morbidities have been identified as potential confounders in our analyses regarding ICU/IMC admission.
T226 5206-5316 Sentence denotes Furthermore, rates of NIV- or high-flow oxygen-therapy and need for vasopressors were increased in this group.
T227 5317-5492 Sentence denotes These observations, together with the results from biomarker analyses, reflect an association of the severity of disease with the incidence of cardia arrhythmia in our cohort.
T228 5493-5679 Sentence denotes More specifically, we show that mechanical ventilation is associated with the occurrence of arrhythmias, even when correcting for age and cardiovascular disease as potential confounders.
T229 5680-5876 Sentence denotes Additionally, overall duration of hospitalization was significantly increased in patients with incident arrhythmia in multiple regression analyses, which has not been reported by previous studies.
T230 5877-5972 Sentence denotes This result points towards a potentially independent prognostic role of arrhythmia in COVID-19.
T231 5973-6116 Sentence denotes In light of limited ventilator- and hospital-capacity during peak episodes of the COVID-19-pandemic, these aspects are of particular relevance.
T232 6117-6375 Sentence denotes In this context, our exploratory univariate analysis of patients with atrial fibrillation shows that not only ventricular arrhythmias but also supraventricular arrhythmias may have implications on the clinical course during hospitalization COVID-19 patients.
T233 6376-6502 Sentence denotes Arrhythmia during hospitalization for COVID-19 was associated with increased in-hospital mortality in the univariate analysis.
T234 6503-6747 Sentence denotes However, in multiple regression analyses, pre-existent cardiovascular disease had a stronger prognostic implication than incident cardiac arrhythmia regarding this aspect, even though the majority of fatal cases were due to respiratory failure.
T235 6748-6877 Sentence denotes This is in line with observations from large multicenter cohorts identifying risk factors for in-hospital death in COVID-19 [28].
T236 6878-7062 Sentence denotes With respect to a wide range of symptoms and prognostic severity associated with an infection with SARS-CoV-2, further studies aiming at individualized risk stratification are crucial.
T237 7064-7075 Sentence denotes Limitations
T238 7076-7149 Sentence denotes Due to its retrospective design, this study carries inherent limitations.
T239 7150-7360 Sentence denotes Despite thorough analysis of clinical records and use of different source documents (e.g., discharge notes, nurses’ reports, daily doctors’ documentation) underreporting of arrhythmia events cannot be excluded.
T240 7361-7458 Sentence denotes Not all arrhythmic events during the clinical course may have been documented in written reports.
T241 7459-7556 Sentence denotes Asymptomatic arrhythmias in patients without continuous ECG-monitoring may also have been missed.
T242 7557-7694 Sentence denotes However, clinically relevant arrhythmias leading to medical interventions are documented as part of the participating centers’ standards.
T243 7695-7815 Sentence denotes Baseline and outcome data recorded in this study were prespecified and screened for in the available clinical documents.
T244 7816-7893 Sentence denotes Missing parameters were specifically inquired from the participating centers.
T245 7894-8061 Sentence denotes Due to different admission protocols and diagnostic standards, there are remaining missing values with regard to certain baseline parameters or biomarker measurements.
T246 8062-8198 Sentence denotes However, we clearly indicate this limitation in the respective tables whenever information was available only in a subgroup of patients.
T247 8199-8458 Sentence denotes QTc-duration was available at baseline in the majority of patients, however, due to different standards of ECG-based follow-up, QTc-duration in the course of hospitalization, e.g., during therapy with QT-prolonging drugs, could not be systematically analyzed.
T248 8459-8602 Sentence denotes Inclusion of both tertiary and secondary-level hospitals may lead to treatment bias due to different standards of care or available facilities.
T249 8603-8764 Sentence denotes Importantly, in our study, all contributing centers provide intermediate and intensive care units and operate according to national and international guidelines.
T250 8765-8904 Sentence denotes Cardiorespiratory monitoring, non-invasive and mechanical ventilation are carried out according to guidelines in all participating centers.
T251 8905-8968 Sentence denotes All centers treated both moderate and severe cases of COVID-19.
T252 8969-9119 Sentence denotes Patients requiring extracorporeal life support were primarily treated at tertiary centers but constituted a minority of subjects in this study cohort.
T253 9120-9199 Sentence denotes Therefore, we do not expect significant bias due to differences in center size.
T254 9200-9332 Sentence denotes However, due to the limited number of patients in the respective subgroups a comprehensive analysis of this aspect was not feasible.
T255 9333-9472 Sentence denotes In order to provide further insight, we present an overview into the types and individual contribution of participating centers (Table S1).
T256 9473-9615 Sentence denotes Additionally, individual specific therapy attemps with respect to COVID-19, e.g., hydroxochloroquine administration, were specified (Table 1).
T257 9616-9804 Sentence denotes Left ventricular ejection fraction (LVEF) may have constituted an additional predictor for arrhythmia, however, the value was not provided in a relevant number of patients in this cohorts.
T258 9805-10024 Sentence denotes In order to account for this limitation, we attempted imputation of these values (Supplementary Materials) hinting at a potential role of reduced LVEF as a risk factor for arrhythmia during hospitalization for COVID-19.
T259 10025-10145 Sentence denotes However, these results are exploratory and have to be interpreted with caution due to the high number of missing values.
T260 10146-10228 Sentence denotes Further efforts should be made to study this specific aspect in COVID-19 patients.