PMC:7784829 / 6399-7113 JSON TXT

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Id	Subject	Object	Predicate	Lexical cue
T51	0-81	Sentence	denotes	The X-ray crystal structure of spike surface glycoprotein of SARS-CoV (PDB entry:
T52	82-191	Sentence	denotes	6CRV, resolution = 3.2 Å) and co-crystallized structure of SARS-CoV-2 RBD with human ACE2 Protein (PDB entry:
T53	192-282	Sentence	denotes	6M0J, resolution = 2.45 Å) was retrieved from Protein Data Bank (https:/www.rscb.org/pdb).
T54	283-647	Sentence	denotes	The protein structure was prepared using the Discovery Studio Visualizer (version 3.1) and AutoDock Tools (ADT; version 1.5.4) through different steps viz. removal of water molecules and co-crystallized ligand, addition of missing hydrogen atoms, addition of Gasteiger-Marsili and Kollman charges, merging of non-polar hydrogens, and assignment of rotatable bonds.
T55	648-714	Sentence	denotes	The file was then saved in pdbqt file format for further analysis.

Id	Subject	Object	Predicate	Lexical cue	tao:has_database_id
177	167-171	Gene	denotes	ACE2	Gene:59272
178	251-255	Gene	denotes	Bank	Gene:55024
179	61-69	Species	denotes	SARS-CoV	Tax:694009
180	141-151	Species	denotes	SARS-CoV-2	Tax:2697049
181	161-166	Species	denotes	human	Tax:9606
182	450-455	Chemical	denotes	water	MESH:D014867
183	514-522	Chemical	denotes	hydrogen	MESH:D006859
184	602-611	Chemical	denotes	hydrogens	MESH:D006859
185	542-559	Disease	denotes	Gasteiger-Marsili