PMC:7784829 / 6372-6889 JSONTXT

{"project":"LitCovid-sentences","denotations":[{"id":"T51","span":{"begin":27,"end":108},"obj":"Sentence"},{"id":"T52","span":{"begin":109,"end":218},"obj":"Sentence"},{"id":"T53","span":{"begin":219,"end":309},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"aration of coordinate file\nThe X-ray crystal structure of spike surface glycoprotein of SARS-CoV (PDB entry: 6CRV, resolution = 3.2 Å) and co-crystallized structure of SARS-CoV-2 RBD with human ACE2 Protein (PDB entry: 6M0J, resolution = 2.45 Å) was retrieved from Protein Data Bank (https:/www.rscb.org/pdb). The protein structure was prepared using the Discovery Studio Visualizer (version 3.1) and AutoDock Tools (ADT; version 1.5.4) through different steps viz. removal of water molecules and co-crystallized liga"}

{"project":"LitCovid-PubTator","denotations":[{"id":"177","span":{"begin":194,"end":198},"obj":"Gene"},{"id":"178","span":{"begin":278,"end":282},"obj":"Gene"},{"id":"179","span":{"begin":88,"end":96},"obj":"Species"},{"id":"180","span":{"begin":168,"end":178},"obj":"Species"},{"id":"181","span":{"begin":188,"end":193},"obj":"Species"},{"id":"182","span":{"begin":477,"end":482},"obj":"Chemical"}],"attributes":[{"id":"A177","pred":"tao:has_database_id","subj":"177","obj":"Gene:59272"},{"id":"A178","pred":"tao:has_database_id","subj":"178","obj":"Gene:55024"},{"id":"A179","pred":"tao:has_database_id","subj":"179","obj":"Tax:694009"},{"id":"A180","pred":"tao:has_database_id","subj":"180","obj":"Tax:2697049"},{"id":"A181","pred":"tao:has_database_id","subj":"181","obj":"Tax:9606"},{"id":"A182","pred":"tao:has_database_id","subj":"182","obj":"MESH:D014867"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"aration of coordinate file\nThe X-ray crystal structure of spike surface glycoprotein of SARS-CoV (PDB entry: 6CRV, resolution = 3.2 Å) and co-crystallized structure of SARS-CoV-2 RBD with human ACE2 Protein (PDB entry: 6M0J, resolution = 2.45 Å) was retrieved from Protein Data Bank (https:/www.rscb.org/pdb). The protein structure was prepared using the Discovery Studio Visualizer (version 3.1) and AutoDock Tools (ADT; version 1.5.4) through different steps viz. removal of water molecules and co-crystallized liga"}