PMC:7782580 / 20386-23240
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7782580","sourcedb":"PMC","sourceid":"7782580","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7782580","text":"Experiment-B\nIn this experiment, we used the CT-data of the CTPVS and CTHVS where the normal cases were from the LUNA data set and the COVID-19 cases were from the Youan hospital. The results of the five evaluation indicators for the comparison of the COVID-19 cases and normal cases of the CTHVS and the CTPVS are shown in Table 3, where the normal cases are from CTPVS and the COVID-19 cases are from the CTHVS. The CNNCF exhibits good performance for the five evaluation indices, which are similar to that of the Respire. and the Rad-5th and higher than that of the Intern, the Emerg. and Rad-3rd. The ROC scores are plotted in Fig. 4b; the AUROC of the CNNCF is 1.0. The precision-recall scores are shown in Fig. 4e; the AUPRC of the CNNCF is 1.0.\nTable 3 Performance indices of the classification framework (CNNCF) of the experiments B and C, and the average performance of the 7th-year respiratory resident (Respira.), the 3rd-year emergency resident (Emerg.), the 1st-year respiratory intern (Intern), the 5th-year radiologist (Rad-5th), and the 3rd-year radiologist (Rad-3rd).\nCT (*Normal and COVID-19 cases)\nCNNCF Respire. Emerg. Intern. Rad-5th Rad-3rd\nF1 (95% CI) 1.0000 (1.0000, 1.0000) 1.0000 (1.0000, 1.0000) 1.0000 (1.0000, 1.0000) 0.9500 (0.8571, 1.0000) 1.0000 (1.0000, 1.0000) 0.9500 (0.8667, 1.0000)\nKappa (95% CI) 1.0000 (1.0000, 1.0000) 1.0000 (1.0000, 1.0000) 1.0000 (1.0000, 1.0000) 0.9500 (0.7422, 1.0000) 1.0000 (1.0000, 1.0000) 0.9000 (0.7487, 1.0000)\nSpecificity (95% CI) 1.0000 (1.0000, 1.0000) 1.0000 (1.0000, 1.0000) 1.0000 (1.0000, 1.0000) 0.9500 (0.8333, 1.0000) 1.0000 (1.0000, 1.0000) 0.9500 (0.8333, 1.0000)\nSensitivity (95% CI) 1.0000 (1.0000, 1.0000) 1.0000 (1.0000, 1.0000) 1.0000 (1.0000, 1.0000) 0.9500 (0.8333, 1.0000) 1.0000 (1.0000, 1.0000) 0.9500 (0.8421, 1.0000)\nPrecision (95% CI) 1.0000 (1.0000, 1.0000) 1.0000 (1.0000, 1.0000) 1.0000 (1.0000, 1.0000) 0.9500 (0.8235, 1.0000) 1.0000 (1.0000, 1.0000) 0.9500 (0.8333, 1.0000)\nCT (Influenza and COVID-19 cases)\nCNNCF Respire. Emerg. Intern. Rad-5th Rad-3rd\nF1 (95%CI) 1.0000 (1.0000, 1.0000) 1.0000 (1.0000, 1.0000) 0.8966 (0.7332, 1.0000) 0.8000 (0.6207, 0.9412) 0.9677 (0.8889, 1.0000) 0.8667 (0.7199, 0.9744)\nKappa (95%CI) 1.0000 (1.0000, 1.0000) 1.0000 (1.0000, 1.0000) 0.8236 (0.5817, 1.0000) 0. 6500 (0.3698, 0.8852) 0.9421 (0.8148, 1.0000) 0.7667 (0.5349, 0.9429)\nSpecificity (95%CI) 1.0000 (1.0000, 1.0000) 1.0000 (1.0000, 1.0000) 0.9048 (0.7619, 1.0000) 0.8500 (0.6818, 1.0000) 0.9500 (0.8333, 1.0000) 0.9000 (0.7619, 1.0000)\nSensitivity (95%CI) 1.0000 (1.0000, 1.0000) 1.0000 (1.0000, 1.0000) 0.9286 (0.7500, 1.0000) 0.8000 (0.5714, 1.0000) 1.0000 (1.0000, 1.0000) 0.8667 (0.6667, 1.0000)\nPrecision (95%CI) 1.0000 (1.0000, 1.0000) 1.0000 (1.0000, 1.0000) 0.8667 (0.6874, 1.0000) 0.8000 (0.5881, 1.0000) 0.9375 (0.8000, 1.0000) 0.8667 (0.6667, 1.0000)","divisions":[{"label":"title","span":{"begin":0,"end":12}},{"label":"label","span":{"begin":752,"end":759}},{"label":"caption","span":{"begin":760,"end":1084}},{"label":"p","span":{"begin":760,"end":1084}},{"label":"table","span":{"begin":1085,"end":1970}},{"label":"tr","span":{"begin":1085,"end":1116}},{"label":"th","span":{"begin":1085,"end":1116}},{"label":"tr","span":{"begin":1117,"end":1162}},{"label":"th","span":{"begin":1117,"end":1122}},{"label":"th","span":{"begin":1123,"end":1131}},{"label":"th","span":{"begin":1132,"end":1138}},{"label":"th","span":{"begin":1139,"end":1146}},{"label":"th","span":{"begin":1147,"end":1154}},{"label":"th","span":{"begin":1155,"end":1162}},{"label":"tr","span":{"begin":1163,"end":1318}},{"label":"td","span":{"begin":1163,"end":1174}},{"label":"td","span":{"begin":1175,"end":1198}},{"label":"td","span":{"begin":1199,"end":1222}},{"label":"td","span":{"begin":1223,"end":1246}},{"label":"td","span":{"begin":1247,"end":1270}},{"label":"td","span":{"begin":1271,"end":1294}},{"label":"td","span":{"begin":1295,"end":1318}},{"label":"tr","span":{"begin":1319,"end":1477}},{"label":"td","span":{"begin":1319,"end":1333}},{"label":"td","span":{"begin":1334,"end":1357}},{"label":"td","span":{"begin":1358,"end":1381}},{"label":"td","span":{"begin":1382,"end":1405}},{"label":"td","span":{"begin":1406,"end":1429}},{"label":"td","span":{"begin":1430,"end":1453}},{"label":"td","span":{"begin":1454,"end":1477}},{"label":"tr","span":{"begin":1478,"end":1642}},{"label":"td","span":{"begin":1478,"end":1498}},{"label":"td","span":{"begin":1499,"end":1522}},{"label":"td","span":{"begin":1523,"end":1546}},{"label":"td","span":{"begin":1547,"end":1570}},{"label":"td","span":{"begin":1571,"end":1594}},{"label":"td","span":{"begin":1595,"end":1618}},{"label":"td","span":{"begin":1619,"end":1642}},{"label":"tr","span":{"begin":1643,"end":1807}},{"label":"td","span":{"begin":1643,"end":1663}},{"label":"td","span":{"begin":1664,"end":1687}},{"label":"td","span":{"begin":1688,"end":1711}},{"label":"td","span":{"begin":1712,"end":1735}},{"label":"td","span":{"begin":1736,"end":1759}},{"label":"td","span":{"begin":1760,"end":1783}},{"label":"td","span":{"begin":1784,"end":1807}},{"label":"tr","span":{"begin":1808,"end":1970}},{"label":"td","span":{"begin":1808,"end":1826}},{"label":"td","span":{"begin":1827,"end":1850}},{"label":"td","span":{"begin":1851,"end":1874}},{"label":"td","span":{"begin":1875,"end":1898}},{"label":"td","span":{"begin":1899,"end":1922}},{"label":"td","span":{"begin":1923,"end":1946}},{"label":"td","span":{"begin":1947,"end":1970}},{"label":"tr","span":{"begin":1971,"end":2004}},{"label":"th","span":{"begin":1971,"end":2004}},{"label":"tr","span":{"begin":2005,"end":2050}},{"label":"th","span":{"begin":2005,"end":2010}},{"label":"th","span":{"begin":2011,"end":2019}},{"label":"th","span":{"begin":2020,"end":2026}},{"label":"th","span":{"begin":2027,"end":2034}},{"label":"th","span":{"begin":2035,"end":2042}},{"label":"th","span":{"begin":2043,"end":2050}},{"label":"tr","span":{"begin":2051,"end":2205}},{"label":"td","span":{"begin":2051,"end":2061}},{"label":"td","span":{"begin":2062,"end":2085}},{"label":"td","span":{"begin":2086,"end":2109}},{"label":"td","span":{"begin":2110,"end":2133}},{"label":"td","span":{"begin":2134,"end":2157}},{"label":"td","span":{"begin":2158,"end":2181}},{"label":"td","span":{"begin":2182,"end":2205}},{"label":"tr","span":{"begin":2206,"end":2364}},{"label":"td","span":{"begin":2206,"end":2219}},{"label":"td","span":{"begin":2220,"end":2243}},{"label":"td","span":{"begin":2244,"end":2267}},{"label":"td","span":{"begin":2268,"end":2291}},{"label":"td","span":{"begin":2292,"end":2316}},{"label":"td","span":{"begin":2317,"end":2340}},{"label":"td","span":{"begin":2341,"end":2364}},{"label":"tr","span":{"begin":2365,"end":2528}},{"label":"td","span":{"begin":2365,"end":2384}},{"label":"td","span":{"begin":2385,"end":2408}},{"label":"td","span":{"begin":2409,"end":2432}},{"label":"td","span":{"begin":2433,"end":2456}},{"label":"td","span":{"begin":2457,"end":2480}},{"label":"td","span":{"begin":2481,"end":2504}},{"label":"td","span":{"begin":2505,"end":2528}},{"label":"tr","span":{"begin":2529,"end":2692}},{"label":"td","span":{"begin":2529,"end":2548}},{"label":"td","span":{"begin":2549,"end":2572}},{"label":"td","span":{"begin":2573,"end":2596}},{"label":"td","span":{"begin":2597,"end":2620}},{"label":"td","span":{"begin":2621,"end":2644}},{"label":"td","span":{"begin":2645,"end":2668}},{"label":"td","span":{"begin":2669,"end":2692}},{"label":"td","span":{"begin":2693,"end":2710}},{"label":"td","span":{"begin":2711,"end":2734}},{"label":"td","span":{"begin":2735,"end":2758}},{"label":"td","span":{"begin":2759,"end":2782}},{"label":"td","span":{"begin":2783,"end":2806}},{"label":"td","span":{"begin":2807,"end":2830}}],"tracks":[{"project":"LitCovid-PubTator","denotations":[{"id":"167","span":{"begin":1101,"end":1109},"obj":"Disease"},{"id":"169","span":{"begin":1989,"end":1997},"obj":"Disease"},{"id":"174","span":{"begin":592,"end":595},"obj":"Gene"},{"id":"175","span":{"begin":135,"end":143},"obj":"Disease"},{"id":"176","span":{"begin":252,"end":260},"obj":"Disease"},{"id":"177","span":{"begin":379,"end":387},"obj":"Disease"}],"attributes":[{"id":"A167","pred":"tao:has_database_id","subj":"167","obj":"MESH:C000657245"},{"id":"A169","pred":"tao:has_database_id","subj":"169","obj":"MESH:C000657245"},{"id":"A174","pred":"tao:has_database_id","subj":"174","obj":"Gene:6236"},{"id":"A175","pred":"tao:has_database_id","subj":"175","obj":"MESH:C000657245"},{"id":"A176","pred":"tao:has_database_id","subj":"176","obj":"MESH:C000657245"},{"id":"A177","pred":"tao:has_database_id","subj":"177","obj":"MESH:C000657245"},{"subj":"167","pred":"source","obj":"LitCovid-PubTator"},{"subj":"169","pred":"source","obj":"LitCovid-PubTator"},{"subj":"174","pred":"source","obj":"LitCovid-PubTator"},{"subj":"175","pred":"source","obj":"LitCovid-PubTator"},{"subj":"176","pred":"source","obj":"LitCovid-PubTator"},{"subj":"177","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T152","span":{"begin":0,"end":12},"obj":"Sentence"},{"id":"T153","span":{"begin":13,"end":179},"obj":"Sentence"},{"id":"T154","span":{"begin":180,"end":413},"obj":"Sentence"},{"id":"T155","span":{"begin":414,"end":600},"obj":"Sentence"},{"id":"T156","span":{"begin":601,"end":670},"obj":"Sentence"},{"id":"T157","span":{"begin":671,"end":751},"obj":"Sentence"},{"id":"T158","span":{"begin":752,"end":1084},"obj":"Sentence"},{"id":"T159","span":{"begin":1085,"end":1116},"obj":"Sentence"},{"id":"T160","span":{"begin":1117,"end":1131},"obj":"Sentence"},{"id":"T161","span":{"begin":1132,"end":1138},"obj":"Sentence"},{"id":"T162","span":{"begin":1139,"end":1146},"obj":"Sentence"},{"id":"T163","span":{"begin":1147,"end":1162},"obj":"Sentence"},{"id":"T164","span":{"begin":1163,"end":1318},"obj":"Sentence"},{"id":"T165","span":{"begin":1319,"end":1477},"obj":"Sentence"},{"id":"T166","span":{"begin":1478,"end":1642},"obj":"Sentence"},{"id":"T167","span":{"begin":1643,"end":1807},"obj":"Sentence"},{"id":"T168","span":{"begin":1808,"end":1970},"obj":"Sentence"},{"id":"T169","span":{"begin":1971,"end":2004},"obj":"Sentence"},{"id":"T170","span":{"begin":2005,"end":2019},"obj":"Sentence"},{"id":"T171","span":{"begin":2020,"end":2026},"obj":"Sentence"},{"id":"T172","span":{"begin":2027,"end":2034},"obj":"Sentence"},{"id":"T173","span":{"begin":2035,"end":2050},"obj":"Sentence"},{"id":"T174","span":{"begin":2051,"end":2205},"obj":"Sentence"},{"id":"T175","span":{"begin":2206,"end":2294},"obj":"Sentence"},{"id":"T176","span":{"begin":2295,"end":2364},"obj":"Sentence"},{"id":"T177","span":{"begin":2365,"end":2528},"obj":"Sentence"},{"id":"T178","span":{"begin":2529,"end":2692},"obj":"Sentence"},{"id":"T179","span":{"begin":2693,"end":2854},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T152","pred":"source","obj":"LitCovid-sentences"},{"subj":"T153","pred":"source","obj":"LitCovid-sentences"},{"subj":"T154","pred":"source","obj":"LitCovid-sentences"},{"subj":"T155","pred":"source","obj":"LitCovid-sentences"},{"subj":"T156","pred":"source","obj":"LitCovid-sentences"},{"subj":"T157","pred":"source","obj":"LitCovid-sentences"},{"subj":"T158","pred":"source","obj":"LitCovid-sentences"},{"subj":"T159","pred":"source","obj":"LitCovid-sentences"},{"subj":"T160","pred":"source","obj":"LitCovid-sentences"},{"subj":"T161","pred":"source","obj":"LitCovid-sentences"},{"subj":"T162","pred":"source","obj":"LitCovid-sentences"},{"subj":"T163","pred":"source","obj":"LitCovid-sentences"},{"subj":"T164","pred":"source","obj":"LitCovid-sentences"},{"subj":"T165","pred":"source","obj":"LitCovid-sentences"},{"subj":"T166","pred":"source","obj":"LitCovid-sentences"},{"subj":"T167","pred":"source","obj":"LitCovid-sentences"},{"subj":"T168","pred":"source","obj":"LitCovid-sentences"},{"subj":"T169","pred":"source","obj":"LitCovid-sentences"},{"subj":"T170","pred":"source","obj":"LitCovid-sentences"},{"subj":"T171","pred":"source","obj":"LitCovid-sentences"},{"subj":"T172","pred":"source","obj":"LitCovid-sentences"},{"subj":"T173","pred":"source","obj":"LitCovid-sentences"},{"subj":"T174","pred":"source","obj":"LitCovid-sentences"},{"subj":"T175","pred":"source","obj":"LitCovid-sentences"},{"subj":"T176","pred":"source","obj":"LitCovid-sentences"},{"subj":"T177","pred":"source","obj":"LitCovid-sentences"},{"subj":"T178","pred":"source","obj":"LitCovid-sentences"},{"subj":"T179","pred":"source","obj":"LitCovid-sentences"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PubTator","color":"#cfec93","default":true},{"id":"LitCovid-sentences","color":"#ec93e9"}]}]}}