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PMC:7781431 / 1570-39179 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
73 48-61 Species denotes coronaviruses Tax:11118
74 63-108 Species denotes severe acute respiratory syndrome coronavirus Tax:694009
75 110-118 Species denotes SARS-CoV Tax:694009
76 124-180 Species denotes middle east respiratory syndrome coronavirus (MERS- CoV) Tax:1335626
77 204-209 Species denotes human Tax:9606
78 321-332 Species denotes coronavirus Tax:11118
79 334-381 Species denotes severe acute respiratory syndrome coronavirus 2 Tax:2697049
80 383-393 Species denotes SARS-CoV-2 Tax:2697049
81 658-668 Species denotes SARS-CoV-2 Tax:2697049
82 836-846 Species denotes SARS-CoV-2 Tax:2697049
83 847-855 Species denotes patients Tax:9606
84 1047-1057 Species denotes SARS-CoV-2 Tax:2697049
85 1308-1318 Species denotes SARS-CoV-2 Tax:2697049
86 1137-1142 Chemical denotes lipid MESH:D008055
87 239-248 Disease denotes mortality MESH:D003643
88 729-738 Disease denotes mortality MESH:D003643
89 894-903 Disease denotes infection MESH:D007239
90 926-938 Disease denotes inflammation MESH:D007249
91 1190-1202 Disease denotes inflammation MESH:D007249
92 1280-1296 Disease denotes viral infections MESH:D001102
93 1440-1456 Disease denotes viral infections MESH:D001102
95 1485-1490 Chemical denotes lipid MESH:D008055
106 1956-1993 Chemical denotes essential polyunsaturated fatty acids
107 1995-2000 Chemical denotes PUFAs MESH:D005231
108 2669-2675 Chemical denotes Serhan
109 2680-2686 Chemical denotes Savill
110 1508-1520 Disease denotes Inflammation MESH:D007249
111 1615-1627 Disease denotes inflammation MESH:D007249
112 1714-1730 Disease denotes viral infections MESH:D001102
113 1795-1807 Disease denotes inflammation MESH:D007249
114 2009-2021 Disease denotes inflammation MESH:D007249
115 2236-2249 Disease denotes efferocytosis
118 2832-2840 Chemical denotes Lipoxins MESH:D044045
119 2842-2845 Chemical denotes LXs MESH:D044045
151 3777-3793 Gene denotes cyclooxygenase-2 Gene:5743
152 3795-3800 Gene denotes COX-2 Gene:5743
153 3814-3819 Gene denotes COX-2 Gene:5743
154 3881-3886 Gene denotes 5-LOX Gene:240
155 2847-2857 Chemical denotes Lipoxin A4 MESH:C040527
156 2859-2863 Chemical denotes LXA4 MESH:C040527
157 2865-2926 Chemical denotes 5S, 6R, 15S-trihydroxy-7E, 9E, 11Z, 13E-eicosatetraenoic acid
158 2932-2942 Chemical denotes lipoxin B4 MESH:C042651
159 2944-2948 Chemical denotes LXB4 MESH:C042651
160 2950-3012 Chemical denotes 5S, 14R, 15S-trihydroxy-6E, 8Z, 10E, 12E-eicosatetraenoic acid
161 3029-3034 Chemical denotes lipid MESH:D008055
162 3058-3064 Chemical denotes Chiang
163 3069-3075 Chemical denotes Serhan
164 3124-3154 Chemical denotes omega-6 (ω-6) arachidonic acid
165 3550-3558 Chemical denotes lipoxins MESH:D044045
166 3603-3610 Chemical denotes aspirin MESH:D001241
167 3650-3657 Chemical denotes Aspirin MESH:D001241
168 3686-3693 Chemical denotes lipoxin MESH:D044045
169 3701-3708 Chemical denotes aspirin MESH:D001241
170 3726-3735 Chemical denotes 15-epi-LX
171 3759-3765 Chemical denotes serine MESH:D012694
172 3839-3847 Chemical denotes 15R-HETE
173 3940-3951 Chemical denotes cholesterol MESH:D002784
174 4019-4031 Chemical denotes arachidonate MESH:D016718
175 4035-4044 Chemical denotes 15-epi-LX
176 4070-4082 Chemical denotes Epi-lipoxins
177 4110-4126 Chemical denotes arachidonic acid MESH:D016718
178 4164-4172 Chemical denotes lipoxins MESH:D044045
179 4174-4185 Chemical denotes 15-epi-LXA4 MESH:C040527
180 4187-4191 Chemical denotes LXA4 MESH:C040527
181 4197-4208 Chemical denotes 15-epi-LXB4
189 4384-4388 Gene denotes PGD2 Gene:5730
190 4490-4496 Species denotes murine Tax:10090
191 4732-4738 Species denotes humans Tax:9606
192 4261-4265 Chemical denotes LXA4 MESH:C040527
193 4375-4379 Chemical denotes PGE2 MESH:D015232
194 4441-4445 Chemical denotes LXA4 MESH:C040527
195 4471-4477 Chemical denotes Serhan
210 5283-5287 Gene denotes PUFA Gene:9933
211 5342-5346 Gene denotes PUFA Gene:9933
212 5706-5711 Gene denotes COX-2 Gene:5743
213 4905-4924 Chemical denotes omega-3 fatty acids MESH:D015525
214 4936-4957 Chemical denotes eicosapentaenoic acid MESH:D015118
215 4959-4962 Chemical denotes EPA MESH:D015118
216 4965-4985 Chemical denotes docosahexaenoic acid MESH:D004281
217 4987-4990 Chemical denotes DHA MESH:D004281
218 4993-5014 Chemical denotes docosapentaenoic acid MESH:C026219
219 5016-5019 Chemical denotes DPA MESH:C026219
220 5026-5043 Chemical denotes clupanodonic acid MESH:C026219
221 5289-5292 Chemical denotes DHA MESH:D004281
222 5689-5696 Chemical denotes aspirin MESH:D001241
223 5998-6017 Chemical denotes omega-3 fatty acids MESH:D015525
233 6204-6209 Gene denotes COX-2 Gene:5743
234 6365-6370 Gene denotes 5-LOX Gene:240
235 6125-6128 Chemical denotes EPA MESH:D015118
236 6225-6232 Chemical denotes aspirin MESH:D001241
237 6274-6280 Chemical denotes oxygen MESH:D010100
238 6293-6333 Chemical denotes 18R-hydro (peroxy)-eicosapentaenoic acid
239 6335-6343 Chemical denotes 18R-HEPE
240 6382-6390 Chemical denotes 18R-HEPE
241 6394-6415 Chemical denotes 5S (6)-epoxy-18R-HEPE
251 7064-7069 Gene denotes 5-LOX Gene:240
252 7074-7088 Gene denotes LTA4 hydrolase Gene:299732
253 6529-6534 Gene denotes 5-LOX Gene:240
254 6941-6944 Species denotes rat Tax:10116
255 6508-6516 Chemical denotes 18R HEPE
256 6538-6568 Chemical denotes 5S-hydroperoxy, 18-hydroxy-EPE
257 6653-6660 Chemical denotes 18-HEPE
258 7095-7103 Chemical denotes 18S-HEPE
259 6831-6843 Disease denotes inflammation MESH:D007249
270 7710-7715 Gene denotes COX-2 Gene:5743
271 7192-7195 Chemical denotes DHA MESH:D004281
272 7404-7407 Chemical denotes DHA MESH:D004281
273 7478-7486 Chemical denotes peroxide MESH:D010545
274 7526-7529 Chemical denotes DHA MESH:D004281
275 7594-7602 Chemical denotes peroxide MESH:D010545
276 7701-7708 Chemical denotes aspirin MESH:D001241
277 7725-7728 Chemical denotes DHA MESH:D004281
278 7732-7746 Chemical denotes 13-hydroxy-DHA
279 7750-7765 Chemical denotes 17R-hydroxy-DHA
284 8427-8448 Species denotes Staphylococcus aureus Tax:1280
285 8134-8157 Disease denotes inflammation initiation MESH:D007249
286 8218-8230 Disease denotes inflammation MESH:D007249
287 8475-8484 Disease denotes infection MESH:D007239
313 8924-8929 Gene denotes COX-2 Gene:5743
314 9091-9096 Gene denotes ALOX5 Gene:240
315 8745-8750 Gene denotes COX-2 Gene:5743
316 8728-8733 Species denotes human Tax:9606
317 9038-9043 Species denotes human Tax:9606
318 9350-9355 Species denotes human Tax:9606
319 9433-9438 Species denotes human Tax:9606
320 8768-8775 Chemical denotes aspirin MESH:D001241
321 8779-8791 Chemical denotes atorvastatin MESH:D000069059
322 8804-8812 Chemical denotes omega-3s MESH:D015525
323 8814-8817 Chemical denotes DPA MESH:C026219
324 8822-8839 Chemical denotes clupanodonic acid MESH:C026219
325 8841-8847 Chemical denotes DPAn-3
326 8876-8883 Chemical denotes Aspirin MESH:D001241
327 8888-8900 Chemical denotes atorvastatin MESH:D000069059
328 8953-8966 Chemical denotes hydroperoxide MESH:D006861
329 9439-9447 Disease denotes infected MESH:D007239
330 9160-9164 CellLine denotes RvT1 CVCL:1045
331 9196-9200 CellLine denotes RvT2 CVCL:1045
332 9231-9235 CellLine denotes RvT3 CVCL:1045
333 9289-9293 CellLine denotes RvT4 CVCL:1045
334 9517-9521 CellLine denotes RvT1 CVCL:1045
335 9523-9527 CellLine denotes RvT2 CVCL:1045
336 9548-9552 CellLine denotes RvT2 CVCL:1045
337 9558-9562 CellLine denotes RvT4 CVCL:1045
348 10038-10043 Species denotes human Tax:9606
349 10338-10344 Species denotes murine Tax:10090
350 9787-9790 Chemical denotes DHA MESH:D004281
351 9871-9874 Chemical denotes DHA MESH:D004281
352 9878-9912 Chemical denotes 14-hydroperoxidocosahexaenoic acid
353 9985-10007 Chemical denotes 13S, 14S-epoxy-maresin
354 10109-10131 Chemical denotes 13S, 14S-epoxy-maresin
355 10354-10383 Disease denotes respiratory distress syndrome MESH:D012128
356 10594-10598 Disease denotes HDHA
357 10863-10871 Disease denotes diabetes MESH:D003920
359 10956-10959 Disease denotes PDs
368 11104-11108 Gene denotes PUFA Gene:9933
369 11132-11136 Gene denotes PUFA Gene:9933
370 11643-11646 Species denotes rat Tax:10116
371 11037-11040 Chemical denotes DHA MESH:D004281
372 11042-11045 Chemical denotes DHA MESH:D004281
373 11064-11072 Chemical denotes fish oil MESH:D005395
374 11524-11539 Chemical denotes 10S, 17S-diHDHA
375 11388-11396 Disease denotes ischemia MESH:D007511
381 11913-11935 Chemical denotes Neuroprotectin A and B
382 11941-11960 Chemical denotes bicyclohexapeptides
383 12082-12087 Chemical denotes ester MESH:D004952
384 11697-11700 Disease denotes PDs
385 12011-12014 Disease denotes PDs
389 12792-12796 Species denotes mice Tax:10090
390 12579-12582 Disease denotes PDs
391 12615-12618 Disease denotes PDs
393 12889-12906 Gene denotes Chemerin receptor Gene:1240
399 12941-12948 Gene denotes ChemR23 Gene:1240
400 12953-12957 Gene denotes ERV1 Gene:2671
401 13110-13114 Gene denotes ERV1 Gene:2671
402 13195-13199 Gene denotes ERV1 Gene:2671
403 13456-13464 Gene denotes chemerin Gene:5919
412 13501-13509 Gene denotes chemerin Gene:5919
413 13634-13638 Gene denotes ERV1 Gene:2671
414 13640-13665 Gene denotes chemokine like receptor 1 Gene:1240
415 13681-13687 Gene denotes CMKLR1 Gene:1240
416 13761-13769 Gene denotes chemerin Gene:5919
417 13832-13836 Gene denotes ERV1 Gene:11692
418 13852-13856 Species denotes mice Tax:10090
419 14047-14050 CellLine denotes CHO CVCL:0213
424 14243-14270 Gene denotes N-formyl peptide receptor 2 Gene:2358
425 14271-14285 Gene denotes LX A4 receptor Gene:2358
426 14287-14291 Gene denotes FPR2 Gene:2358
427 14292-14295 Gene denotes ALX Gene:84941
439 14308-14312 Gene denotes FPR2 Gene:2358
440 14436-14440 Gene denotes fMLP Gene:2357
441 14493-14497 Gene denotes FPR2 Gene:2358
442 14498-14501 Gene denotes ALX Gene:84941
443 14549-14553 Gene denotes FPR2 Gene:2358
444 14554-14557 Gene denotes ALX Gene:84941
445 14408-14434 Chemical denotes N-formyl methionyl peptide
446 14645-14647 Chemical denotes 3H MESH:D014316
447 14736-14740 Chemical denotes LXA4 MESH:C040527
448 14869-14875 Chemical denotes Serhan
449 14822-14835 Disease denotes efferocytosis
458 15108-15112 Gene denotes FPR2 Gene:2358
459 15113-15116 Gene denotes ALX Gene:84941
460 15316-15326 Gene denotes Annexin A1 Gene:301
461 15328-15333 Gene denotes ANXA1 Gene:301
462 15426-15441 Gene denotes serum amyloid A Gene:6287
463 15443-15446 Gene denotes SAA Gene:6287
464 15466-15471 Gene denotes LL-37 Gene:820
465 15040-15046 Chemical denotes lipids MESH:D008055
493 15544-15549 Gene denotes GPR18 Gene:2841
494 15691-15696 Gene denotes GPR18 Gene:2841
495 15771-15776 Gene denotes GPR18 Gene:2841
496 16058-16063 Gene denotes GPR18 Gene:2841
497 16120-16125 Gene denotes GPR18 Gene:2841
498 16258-16263 Gene denotes GPR18 Gene:2841
499 16323-16326 Gene denotes CB1 Gene:1268
500 16328-16331 Gene denotes CB2 Gene:1269
501 16337-16342 Gene denotes GPR55 Gene:9290
502 16592-16597 Gene denotes GPR18 Gene:2841
503 16654-16658 Gene denotes EBI2 Gene:1880
504 15819-15839 Chemical denotes N-arachidonylglycine MESH:C465623
505 15841-15846 Chemical denotes NAGly MESH:C465623
506 15849-15859 Chemical denotes anandamide MESH:C078814
507 15897-15907 Chemical denotes anandamide MESH:C078814
508 15935-15955 Chemical denotes abnormal-cannabidiol MESH:C479832
509 15957-15964 Chemical denotes Abn-CBD MESH:C479832
510 16414-16441 Chemical denotes n-arachidonoyl ethanolamine MESH:C557222
511 16443-16446 Chemical denotes AEA MESH:C557222
512 16449-16472 Chemical denotes 2-arachidonoyl glycerol MESH:C094503
513 16474-16478 Chemical denotes 2-AG MESH:C094503
514 16481-16504 Chemical denotes Δ9-tetrahydrocannabinol MESH:D013759
515 16506-16512 Chemical denotes Δ9-THC MESH:D013759
516 16520-16548 Chemical denotes arachidonoylcyclopropylamide
517 16550-16554 Chemical denotes ACPA
518 16238-16250 Disease denotes inflammation MESH:D007249
519 16713-16746 Disease denotes Epstein-Barr virus (EBV) infected MESH:D020031
537 16843-16848 Gene denotes GPR32 Gene:2854
538 17038-17043 Gene denotes GPR32 Gene:2854
539 17112-17117 Gene denotes TNF-α Gene:7124
540 17129-17134 Gene denotes NF-κB Gene:4790
541 17149-17154 Gene denotes GPR32 Gene:2854
542 17246-17251 Gene denotes GPR32 Gene:2854
543 17257-17261 Gene denotes FPR2 Gene:2358
544 17262-17265 Gene denotes ALX Gene:84941
545 17288-17293 Gene denotes GPR32 Gene:2854
546 17370-17375 Gene denotes GPR32 Gene:2854
547 17515-17520 Gene denotes GPR32 Gene:2854
548 17674-17679 Gene denotes GPR32 Gene:2854
549 17870-17875 Gene denotes GPR32 Gene:2854
550 16875-16880 Species denotes human Tax:9606
551 17070-17075 Species denotes human Tax:9606
552 17052-17054 Chemical denotes 3H MESH:D014316
553 17750-17761 Disease denotes lung cancer MESH:D008175
575 18048-18053 Gene denotes GPR37 Gene:2861
576 18057-18096 Gene denotes Parkin-related endothelin-like receptor Gene:2861
577 18098-18104 Gene denotes Pael-R Gene:2861
578 18230-18235 Gene denotes GPR37 Gene:2861
579 18401-18406 Gene denotes GPR37 Gene:2861
580 18620-18625 Gene denotes GPR37 Gene:2861
581 18724-18729 Gene denotes GPR37 Gene:2861
582 18815-18820 Gene denotes Gpr37 Gene:14763
583 18913-18918 Gene denotes GPR37 Gene:14763
584 19142-19147 Gene denotes GPR37 Gene:14763
585 18734-18740 Species denotes murine Tax:10090
586 18824-18828 Species denotes mice Tax:10090
587 18463-18471 Chemical denotes dopamine MESH:D004298
588 18685-18692 Chemical denotes calcium MESH:D002118
589 18304-18326 Disease denotes neurological disorders MESH:D009422
590 18335-18351 Disease denotes Parkin’s disease MESH:D010300
591 18356-18362 Disease denotes autism MESH:D001321
592 18422-18447 Disease denotes autism spectrum disorders MESH:D000067877
593 18966-18978 Disease denotes inflammation MESH:D007249
594 18985-19000 Disease denotes ischemic stroke MESH:D002544
595 18696-18702 CellLine denotes HEK293 CVCL:0045
597 19243-19259 Chemical denotes Leukotriene BLT1
614 19260-19264 Gene denotes BLT1 Gene:1241
615 19495-19499 Gene denotes BLT1 Gene:1241
616 19543-19547 Gene denotes BLT1 Gene:1241
617 19639-19643 Gene denotes BLT1 Gene:1241
618 19946-19950 Gene denotes BLT1 Gene:1241
619 20001-20005 Gene denotes BLT1 Gene:1241
620 20096-20101 Gene denotes NF-κB Gene:4790
621 19729-19734 Species denotes human Tax:9606
622 19345-19359 Chemical denotes leukotriene B4 MESH:D007975
623 19379-19384 Chemical denotes lipid MESH:D008055
624 19655-19659 Chemical denotes U-75
625 19713-19715 Chemical denotes 3H MESH:D014316
626 19894-19901 Chemical denotes calcium MESH:D002118
627 20117-20124 Chemical denotes calcium MESH:D002118
628 20014-20026 Disease denotes inflammation MESH:D007249
629 19918-19924 CellLine denotes HEK293 CVCL:0045
634 20173-20177 Gene denotes BLT1 Gene:1241
635 20284-20288 Gene denotes FPR2 Gene:2358
636 20289-20292 Gene denotes ALX Gene:84941
637 20316-20347 Disease denotes allergic pulmonary inflammation MESH:D011014
643 20408-20412 Gene denotes BLT1 Gene:1241
644 20698-20703 Gene denotes IL-10 Gene:3586
645 20812-20816 Gene denotes BLT1 Gene:1241
646 20472-20476 Chemical denotes LTB4 MESH:D007975
647 20785-20788 Chemical denotes ROS
651 21001-21007 Gene denotes GPR101 Gene:83550
652 21054-21057 Chemical denotes DPA MESH:C026219
653 21061-21084 Disease denotes arthritis and infection MESH:D001168
671 21239-21244 Gene denotes PPARγ Gene:5468
672 21343-21354 Gene denotes hPPARγ-GAL4 Gene:5468
673 21443-21491 Gene denotes peroxisome proliferator-activated receptor gamma Gene:5468
674 21493-21498 Gene denotes PPARγ Gene:5468
675 21542-21547 Gene denotes PPARγ Gene:5468
676 21650-21655 Gene denotes PPARγ Gene:5468
677 21670-21674 Gene denotes IκBα Gene:4792
678 21691-21696 Gene denotes NF-κB Gene:4790
679 21697-21700 Gene denotes p65 Gene:5970
680 21796-21801 Gene denotes PPARγ Gene:5468
681 21910-21935 Gene denotes aryl hydrocarbon receptor Gene:196
682 21937-21940 Gene denotes AhR Gene:196
683 21312-21315 Gene denotes HNG Gene:4900
684 21293-21298 Species denotes human Tax:9606
685 21729-21732 Chemical denotes LPS MESH:D008070
686 21812-21818 Chemical denotes GW9662 MESH:C457499
687 21741-21752 Disease denotes lung injury MESH:D055370
692 22055-22060 Gene denotes TRPV1 Gene:7442
693 22155-22159 Gene denotes RORα Gene:6095
694 22175-22179 Gene denotes TLR4 Gene:7099
695 22256-22260 Gene denotes LGR6 Gene:59352
697 22546-22562 Disease denotes Virus Infections MESH:D001102
707 23565-23570 Gene denotes PD-L1 Gene:29126
708 23352-23391 Species denotes Kaposi’s Sarcoma-Associated Herpesvirus Tax:37296
709 23393-23397 Species denotes KSHV Tax:37296
710 23171-23187 Disease denotes viral infections MESH:D001102
711 23549-23554 Disease denotes death MESH:D003643
712 23575-23591 Disease denotes Kaposi’s Sarcoma MESH:D012514
713 23765-23780 Disease denotes virus infection MESH:D001102
714 23871-23886 Disease denotes viral infection MESH:D001102
715 23895-23907 Disease denotes inflammation MESH:D007249
722 24002-24019 Species denotes Influenza viruses Tax:11308
723 24271-24286 Species denotes influenza virus Tax:11308
724 24648-24663 Species denotes influenza virus Tax:11308
725 24491-24500 Species denotes influenza Tax:11320
726 24075-24087 Disease denotes inflammation MESH:D007249
727 24130-24145 Disease denotes viral infection MESH:D001102
747 24792-24802 Gene denotes annexin A1 Gene:301
748 24804-24809 Gene denotes ANXA1 Gene:301
749 24987-24992 Gene denotes ANXA1 Gene:301
750 25002-25006 Gene denotes FPR2 Gene:2358
751 25035-25039 Gene denotes ERK2 Gene:5594
752 25125-25129 Gene denotes FPR2 Gene:2358
753 25423-25426 Gene denotes SAA Gene:6287
754 25542-25546 Gene denotes FPR2 Gene:2358
755 25547-25550 Gene denotes ALX Gene:84941
756 25590-25594 Gene denotes FPR2 Gene:2358
757 25595-25598 Gene denotes ALX Gene:84941
758 24826-24835 Species denotes influenza Tax:11320
759 24966-24977 Chemical denotes sialic acid MESH:D019158
760 24844-24852 Disease denotes toxicity MESH:D064420
761 25249-25264 Disease denotes viral infection MESH:D001102
762 25349-25361 Disease denotes inflammation MESH:D007249
763 25376-25391 Disease denotes viral infection MESH:D001102
764 25463-25467 Disease denotes COPD MESH:D029424
765 25492-25514 Disease denotes virus coinfection acts MESH:D060085
778 26032-26039 Gene denotes ChemR23 Gene:14747
779 25789-25804 Species denotes influenza virus Tax:11308
780 26126-26131 Species denotes mouse Tax:10090
781 26283-26298 Species denotes influenza virus Tax:11308
782 25985-25996 Species denotes Haemophilus Tax:727
783 25997-26006 Species denotes influenza Tax:11320
784 25827-25839 Disease denotes inflammation MESH:D007249
785 25876-25895 Disease denotes bacterial infection MESH:D001424
786 25924-25941 Disease denotes lung inflammation MESH:D011014
787 26071-26088 Disease denotes lung inflammation MESH:D011014
788 26147-26162 Disease denotes viral pneumonia
789 26259-26268 Disease denotes pneumonia MESH:D011014
796 26408-26412 Species denotes H5N1 Tax:102793
797 26905-26909 Species denotes mice Tax:10090
798 26370-26379 Species denotes Influenza Tax:11320
799 26657-26666 Species denotes influenza Tax:11320
800 26896-26904 Disease denotes infected MESH:D007239
801 26987-26996 Disease denotes infection MESH:D007239
816 27138-27159 Gene denotes Herpesviruses 1 and 2
817 27161-27166 Species denotes HSV-1 Tax:10298
818 27171-27176 Species denotes HSV-2 Tax:10310
819 27204-27228 Species denotes human alphaherpesvirus 1 Tax:10298
820 27233-27257 Species denotes human alphaherpesvirus 2 Tax:10310
821 27289-27294 Species denotes human Tax:9606
822 27337-27342 Species denotes human Tax:9606
823 27295-27311 Disease denotes viral infections MESH:D001102
824 27365-27380 Disease denotes Chayavichitsilp
825 27429-27438 Disease denotes infection MESH:D007239
826 27583-27595 Disease denotes inflammation MESH:D007249
827 27632-27641 Disease denotes blindness MESH:D001766
828 27662-27671 Disease denotes keratitis MESH:D007634
829 27701-27716 Disease denotes viral infection MESH:D001102
839 27809-27812 Gene denotes CD4 Gene:920
840 27928-27932 Gene denotes IFNγ Gene:3458
841 27937-27941 Gene denotes IL-6 Gene:3569
842 27998-28003 Gene denotes IL-10 Gene:3586
843 28319-28323 Species denotes mice Tax:10090
844 28081-28090 Disease denotes keratitis MESH:D007634
845 28231-28238 Disease denotes corneal MESH:D003316
846 28280-28297 Disease denotes keratitis lesions MESH:D007634
847 28360-28368 Disease denotes infected MESH:D007239
851 28477-28504 Species denotes Respiratory syncytial virus Tax:12814
852 28506-28534 Species denotes human immunodeficiency virus Tax:12721
853 28540-28557 Disease denotes hepatitis C virus MESH:D006526
877 29213-29218 Gene denotes COX-2 Gene:5743
878 29562-29566 Gene denotes FPR2 Gene:2358
879 29567-29570 Gene denotes ALX Gene:84941
880 29575-29580 Gene denotes GPR32 Gene:2854
881 28558-28585 Species denotes Respiratory syncytial virus Tax:12814
882 28607-28612 Species denotes human Tax:9606
883 28644-28648 Species denotes HRSV Tax:11250
884 28654-28676 Species denotes human orthopneumovirus Tax:11250
885 28613-28624 Species denotes respiratory Tax:12814
886 29491-29502 Species denotes respiratory Tax:12814
887 28587-28590 Species denotes RSV Tax:12814
888 28942-28945 Species denotes RSV Tax:12814
889 29201-29204 Species denotes RSV Tax:12814
890 29519-29522 Species denotes RSV Tax:12814
891 29707-29710 Species denotes RSV Tax:12814
892 29425-29456 Chemical denotes polyinosinic-polycytidylic acid MESH:D011070
893 29654-29659 Chemical denotes lipid MESH:D008055
894 28701-28723 Disease denotes respiratory infections MESH:D012141
895 28733-28741 Disease denotes infected MESH:D007239
896 28845-28873 Disease denotes respiratory tract infections MESH:D012141
897 28946-28955 Disease denotes infection MESH:D007239
898 28967-28980 Disease denotes bronchiolitis MESH:D001988
899 29744-29753 Disease denotes infection MESH:D007239
910 29765-29793 Species denotes Human immunodeficiency virus Tax:12721
911 29929-29934 Species denotes HIV-1 Tax:11676
912 29939-29944 Species denotes HIV-2 Tax:11709
913 29795-29798 Species denotes HIV Tax:12721
914 29946-29959 Disease denotes HIV infection MESH:D015658
915 29985-30010 Disease denotes immunodeficiency syndrome MESH:D007153
916 30012-30016 Disease denotes AIDS MESH:D000163
917 30074-30078 Disease denotes AIDS MESH:D000163
918 30103-30127 Disease denotes opportunistic infections MESH:D009894
919 30153-30159 Disease denotes cancer MESH:D009369
935 30366-30371 Gene denotes TNF-α Gene:7124
936 30377-30391 Gene denotes interleukin-1β Gene:3553
937 30785-30790 Gene denotes gp120 Gene:3700
938 30825-30829 Gene denotes FPR2 Gene:2358
939 30830-30833 Gene denotes ALX Gene:84941
940 30902-30906 Gene denotes CCR5 Gene:1234
941 30911-30916 Gene denotes CXCR4 Gene:7852
942 30268-30273 Species denotes human Tax:9606
943 30318-30323 Species denotes human Tax:9606
944 30749-30784 Species denotes human immunodeficiency virus type 1 Tax:11676
945 30231-30245 Disease denotes HIV-1 infected MESH:D015658
946 30287-30298 Disease denotes astrocytoma MESH:D001254
947 30336-30351 Disease denotes tumour necrosis MESH:D009336
948 30624-30639 Disease denotes viral infection MESH:D001102
949 30674-30683 Disease denotes infection MESH:D007239
969 30950-30954 Gene denotes FPR2 Gene:2358
970 30955-30958 Gene denotes ALX Gene:84941
971 31107-31111 Gene denotes CCR3 Gene:1232
972 31116-31120 Gene denotes FPR2 Gene:2358
973 31121-31124 Gene denotes ALX Gene:84941
974 31200-31203 Gene denotes Env Gene:100616444
975 31256-31260 Gene denotes FPR2 Gene:2358
976 31283-31287 Gene denotes CCR3 Gene:1232
977 31312-31319 Gene denotes ChemR23 Gene:1240
978 31444-31451 Gene denotes ChemR23 Gene:1240
979 31588-31592 Gene denotes FPR2 Gene:2358
980 31597-31604 Gene denotes ChemR23 Gene:1240
981 31362-31367 Species denotes HIV-1 Tax:11676
982 31372-31377 Species denotes HIV-2 Tax:11709
983 31021-31024 Species denotes HIV Tax:12721
984 31139-31142 Species denotes HIV Tax:12721
985 31343-31346 Species denotes HIV Tax:12721
986 31459-31468 Disease denotes infection MESH:D007239
987 31608-31621 Disease denotes HIV infection MESH:D015658
1018 32337-32342 Gene denotes GPR37 Gene:2861
1019 32464-32469 Gene denotes GPR37 Gene:2861
1020 32643-32647 Gene denotes FPR2 Gene:2358
1021 32648-32651 Gene denotes ALX Gene:84941
1022 32797-32800 Gene denotes SAA Gene:6287
1023 32064-32067 Gene denotes C5A Gene:728
1024 32848-32851 Gene denotes SAA Gene:6287
1025 32550-32553 Gene denotes SAA Gene:6287
1026 31623-31640 Species denotes Hepatitis C virus Tax:11103
1027 31911-31917 Species denotes humans Tax:9606
1028 31948-31953 Species denotes Lemon Tax:2708
1029 32161-32166 Species denotes human Tax:9606
1030 31642-31645 Species denotes HCV Tax:11103
1031 31781-31784 Species denotes HCV Tax:11103
1032 32037-32040 Species denotes HCV Tax:11103
1033 32051-32054 Species denotes HCV Tax:11103
1034 32104-32107 Species denotes HCV Tax:11103
1035 32283-32286 Species denotes HCV Tax:11103
1036 32318-32321 Species denotes HCV Tax:11103
1037 32536-32539 Species denotes HCV Tax:11103
1038 32589-32592 Species denotes HCV Tax:11103
1039 32288-32297 Chemical denotes Vitamin D MESH:D014807
1040 31822-31829 Disease denotes cancers MESH:D009369
1041 31838-31850 Disease denotes liver cancer MESH:D006528
1042 31852-31876 Disease denotes hepatocellular carcinoma MESH:D006528
1043 31899-31907 Disease denotes lymphoma MESH:D008223
1044 32622-32634 Disease denotes inflammation MESH:D007249
1045 32661-32673 Disease denotes liver damage MESH:D056486
1046 32825-32837 Disease denotes liver damage MESH:D056486
1047 32859-32872 Disease denotes HCV infection MESH:D006526
1058 32886-32933 Species denotes Severe acute respiratory syndrome Coronavirus 2 Tax:2697049
1059 32935-32945 Species denotes SARS-CoV-2 Tax:2697049
1060 32959-32970 Species denotes coronavirus Tax:11118
1061 33093-33106 Species denotes Coronaviridae Tax:11118
1062 33173-33183 Species denotes SARS-CoV-2 Tax:2697049
1063 32990-33014 Disease denotes 2019 coronavirus disease MESH:C000657245
1064 33016-33024 Disease denotes COVID-19 MESH:C000657245
1065 33029-33048 Disease denotes respiratory disease MESH:D012140
1066 33074-33082 Disease denotes COVID-19 MESH:C000657245
1067 33234-33240 Disease denotes deaths MESH:D003643
1091 34027-34058 Gene denotes angiotensin-converting enzyme 2 Gene:59272
1092 34060-34064 Gene denotes ACE2 Gene:59272
1093 34197-34202 Gene denotes spike Gene:43740568
1094 34204-34205 Gene denotes S Gene:43740568
1095 33525-33535 Species denotes SARS-CoV-2 Tax:2697049
1096 33865-33873 Species denotes patients Tax:9606
1097 34186-34196 Species denotes SARS-CoV-2 Tax:2697049
1098 34810-34820 Species denotes SARS-CoV-2 Tax:2697049
1099 33473-33477 Chemical denotes PGE2 MESH:D015232
1100 33494-33500 Chemical denotes lipids MESH:D008055
1101 33558-33574 Chemical denotes arachidonic acid MESH:D016718
1102 33576-33603 Chemical denotes dihomo-gamma-linolenic acid MESH:D015126
1103 33609-33629 Chemical denotes gamma-linolenic acid MESH:D017965
1104 33975-33984 Chemical denotes Elovanoid
1105 34101-34107 Chemical denotes lipids MESH:D008055
1106 34273-34286 Chemical denotes Elovanoid-N32
1107 34551-34559 Chemical denotes fish oil MESH:D005395
1108 33700-33720 Disease denotes SARS-CoV-2 infection MESH:C000657245
1109 33766-33775 Disease denotes infection MESH:D007239
1110 33837-33864 Disease denotes deficiency of SPMs in obese MESH:D009765
1111 33929-33949 Disease denotes SARS-CoV-2 infection MESH:C000657245
1112 34496-34516 Disease denotes SARS-CoV-2 infection MESH:C000657245
1113 34746-34767 Disease denotes inflammatory diseases MESH:D007249
1123 35804-35814 Species denotes SARS-CoV-2 Tax:2697049
1124 35501-35520 Chemical denotes omega-3 fatty acids MESH:D015525
1125 35010-35022 Disease denotes inflammation MESH:D007249
1126 35541-35544 Disease denotes PDs
1127 35757-35769 Disease denotes inflammation MESH:D007249
1128 35998-36018 Disease denotes SARS-CoV-2 infection MESH:C000657245
1129 36025-36037 Disease denotes inflammation MESH:D007249
1130 36056-36068 Disease denotes inflammation MESH:D007249
1131 36195-36204 Disease denotes infection MESH:D007239
1137 36421-36426 Species denotes human Tax:9606
1138 36546-36561 Disease denotes virus infection MESH:D001102
1139 36578-36593 Disease denotes virus infection MESH:D001102
1140 36612-36624 Disease denotes inflammation MESH:D007249
1141 36745-36765 Disease denotes bacterial infections MESH:D001424
1145 36859-36871 Disease denotes inflammation MESH:D007249
1146 36900-36916 Disease denotes viral infections MESH:D001102
1147 36928-36948 Disease denotes SARS-CoV-2 infection MESH:C000657245
1149 36957-36969 Disease denotes Inflammation MESH:D007249
1153 37292-37295 Gene denotes RTA Gene:116535
1154 37338-37342 Species denotes KSHV Tax:37296
1155 37344-37360 Disease denotes Kaposi’s sarcoma MESH:D012514
1158 37426-37441 Disease denotes viral infection MESH:D001102
1159 37450-37462 Disease denotes inflammation MESH:D007249

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T5 670-684 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041
T6 887-903 Phenotype denotes severe infection http://purl.obolibrary.org/obo/HP_0032169
T7 4497-4508 Phenotype denotes peritonitis http://purl.obolibrary.org/obo/HP_0002586
T8 8020-8031 Phenotype denotes peritonitis http://purl.obolibrary.org/obo/HP_0002586
T9 10354-10374 Phenotype denotes respiratory distress http://purl.obolibrary.org/obo/HP_0002098
T10 11647-11658 Phenotype denotes peritonitis http://purl.obolibrary.org/obo/HP_0002586
T11 17750-17761 Phenotype denotes lung cancer http://purl.obolibrary.org/obo/HP_0100526
T12 18356-18362 Phenotype denotes autism http://purl.obolibrary.org/obo/HP_0000717
T13 18422-18447 Phenotype denotes autism spectrum disorders http://purl.obolibrary.org/obo/HP_0000729
T14 18985-19000 Phenotype denotes ischemic stroke http://purl.obolibrary.org/obo/HP_0002140
T15 21061-21070 Phenotype denotes arthritis http://purl.obolibrary.org/obo/HP_0001369
T16 23352-23368 Phenotype denotes Kaposi’s Sarcoma http://purl.obolibrary.org/obo/HP_0100726
T17 23575-23591 Phenotype denotes Kaposi’s Sarcoma http://purl.obolibrary.org/obo/HP_0100726
T18 25463-25467 Phenotype denotes COPD http://purl.obolibrary.org/obo/HP_0006510
T19 26153-26162 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T20 26259-26268 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T21 27632-27641 Phenotype denotes blindness http://purl.obolibrary.org/obo/HP_0000618
T22 27662-27671 Phenotype denotes keratitis http://purl.obolibrary.org/obo/HP_0000491
T23 28081-28090 Phenotype denotes keratitis http://purl.obolibrary.org/obo/HP_0000491
T24 28280-28289 Phenotype denotes keratitis http://purl.obolibrary.org/obo/HP_0000491
T25 28512-28528 Phenotype denotes immunodeficiency http://purl.obolibrary.org/obo/HP_0002721
T26 28540-28549 Phenotype denotes hepatitis http://purl.obolibrary.org/obo/HP_0012115
T27 28701-28723 Phenotype denotes respiratory infections http://purl.obolibrary.org/obo/HP_0011947
T28 28839-28873 Phenotype denotes lower respiratory tract infections http://purl.obolibrary.org/obo/HP_0002783
T29 28967-28980 Phenotype denotes bronchiolitis http://purl.obolibrary.org/obo/HP_0011950
T30 29771-29787 Phenotype denotes immunodeficiency http://purl.obolibrary.org/obo/HP_0002721
T31 29985-30001 Phenotype denotes immunodeficiency http://purl.obolibrary.org/obo/HP_0002721
T32 30103-30127 Phenotype denotes opportunistic infections http://purl.obolibrary.org/obo/HP_0031690
T33 30153-30159 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T34 30287-30298 Phenotype denotes astrocytoma http://purl.obolibrary.org/obo/HP_0009592
T35 30336-30342 Phenotype denotes tumour http://purl.obolibrary.org/obo/HP_0002664
T36 30755-30771 Phenotype denotes immunodeficiency http://purl.obolibrary.org/obo/HP_0002721
T37 31623-31632 Phenotype denotes Hepatitis http://purl.obolibrary.org/obo/HP_0012115
T38 31801-31810 Phenotype denotes hepatitis http://purl.obolibrary.org/obo/HP_0012115
T39 31838-31850 Phenotype denotes liver cancer http://purl.obolibrary.org/obo/HP_0002896
T40 31852-31876 Phenotype denotes hepatocellular carcinoma http://purl.obolibrary.org/obo/HP_0001402
T41 31899-31907 Phenotype denotes lymphoma http://purl.obolibrary.org/obo/HP_0002665
T42 33271-33286 Phenotype denotes cytokine storms http://purl.obolibrary.org/obo/HP_0033041
T43 33536-33550 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041
T44 33671-33678 Phenotype denotes Obesity http://purl.obolibrary.org/obo/HP_0001513
T45 34361-34375 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041
T46 35815-35829 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041
T47 37344-37360 Phenotype denotes Kaposi’s sarcoma http://purl.obolibrary.org/obo/HP_0100726

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T12 0-12 Sentence denotes Introduction
T13 13-269 Sentence denotes The unexpected emergence of deadly coronaviruses, severe acute respiratory syndrome coronavirus (SARS-CoV) and middle east respiratory syndrome coronavirus (MERS- CoV) significantly affected human health, leading to increased mortality and life disruption.
T14 270-535 Sentence denotes Recently, a third highly pathogenic and infectious coronavirus, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), emerged as a deadly pandemic calling for intense research efforts on its pathogenicity mechanism and development of therapeutic strategies.
T15 536-904 Sentence denotes Among others, pro-resolving mediators have been investigated as a therapeutic opportunity for treatment and management of SARS-CoV-2; cytokine storm has been associated with severe illness and mortality, with many studies reporting higher concentrations of pro-inflammatory cytokines in severely ill SARS-CoV-2 patients as compared to those with less severe infection.
T16 905-1058 Sentence denotes Hence, resolution of inflammation through selective counter-regulation of cytokines has been identified as a potential therapeutic target for SARS-CoV-2.
T17 1059-1319 Sentence denotes In this review, we discussed the characteristics of specialized pro-resolving lipid mediators (SPMs) that induce the resolution of inflammation and reviewed evidence from recent studies on SPMs as therapeutic options for viral infections, including SARS-CoV-2.
T18 1320-1457 Sentence denotes We hope that this review will be of great help in guiding researchers who are exploring SPMs as therapeutic targets for viral infections.
T19 1459-1507 Sentence denotes Specialized pro-resolving lipid mediators (SPMs)
T20 1508-1780 Sentence denotes Inflammation is an extremely important, self-limiting immune response; however, uncontrolled or unresolved inflammation has been established as a pathophysiological mechanism for various diseases including viral infections, and a cause for prolonged homeostasis imbalance.
T21 1781-2022 Sentence denotes Resolution of inflammation occurs in an overlapping stage dominated by the spatial and temporal biosynthesis of pro-resolved mediators (Headland and Norling 2015), SPMs, from essential polyunsaturated fatty acids (PUFAs) during inflammation.
T22 2023-2351 Sentence denotes The SPMs initiate the process of resolution which include restriction or cessation of neutrophil infiltration, counter-regulation of chemokines and cytokines, induction of the neutrophils apoptosis and subsequent efferocytosis (the process by which apoptotic cells are removed by phagocytic cells) by macrophages (Reville et al.
T23 2352-2609 Sentence denotes 2006), the conversion of macrophages from classically activated (M1) to alternatively activated cells (M2), return of non-apoptotic cells to the vascular system or lymphatic vessels, and the start of the healing process (Fig. 1) (Headland and Norling 2015).
T24 2610-2693 Sentence denotes These events facilitate proper return homeostasis balance (Serhan and Savill 2005).
T25 2694-2789 Sentence denotes For a comprehensive review, including structural explanations of SPMs, see reviews (Park et al.
T26 2790-2830 Sentence denotes 2020; Chiang and Serhan 2017; Lee 2012).
T27 2832-2846 Sentence denotes Lipoxins (LXs)
T28 2847-3082 Sentence denotes Lipoxin A4 (LXA4; 5S, 6R, 15S-trihydroxy-7E, 9E, 11Z, 13E-eicosatetraenoic acid) and lipoxin B4 (LXB4; 5S, 14R, 15S-trihydroxy-6E, 8Z, 10E, 12E-eicosatetraenoic acid) were the first lipid SPMs to be discovered (Chiang and Serhan 2017).
T29 3083-3242 Sentence denotes They are produced from the conversion of omega-6 (ω-6) arachidonic acid (AA) by lipoxygenase (LOX) through unicellular and transcellular biosynthesis pathways.
T30 3243-3480 Sentence denotes In transcellular biosynthesis, LXs are synthesized by12-LOX derived through platelet-leukocyte interaction while unicellular biosynthesis pathways involve a series of LOXs-15-lipoxygenase, 5-lipoxygenase, and epoxide hydrolase reactions.
T31 3481-3649 Sentence denotes In addition to the lipoxygenase-initiated biosynthesis, two distinct lipoxins biosynthesis pathways have been elucidated; aspirin-triggered and statin-triggered routes.
T32 3650-3901 Sentence denotes Aspirin induces the production of a lipoxin named “aspirin-triggered " (AT) 15-epi-LX through acetylation of serine residue of cyclooxygenase-2 (COX-2), acetylated COX-2 transforms AA into 15R-HETE, which serves as a substrate for 5-LOX (Chiang et al.
T33 3902-3908 Sentence denotes 2005).
T34 3909-4062 Sentence denotes Statins, widely used as potent cholesterol-lowering agents, have also been found to enhance the conversion of arachidonate to 15-epi-LX (Planaguma et al.
T35 4063-4069 Sentence denotes 2010).
T36 4070-4229 Sentence denotes Epi-lipoxins, trihydroxy metabolites of arachidonic acid, are 15R-epimers of their respective lipoxins, 15-epi-LXA4, LXA4, and 15-epi-LXB4, LXB4 (Romano et al.
T37 4230-4236 Sentence denotes 2015).
T38 4237-4484 Sentence denotes In vivo biosynthesis of LXA4 is triggered in an acute inflammatory process in which Polymorphonuclear neutrophil (PMN)’s interaction with PGE2 and PGD2 activates 15-lipoxygenase subsequently facilitating LXA4 biosynthesis (Claria and Serhan 1995).
T39 4485-4638 Sentence denotes In a murine peritonitis model, the maximum level of LXA4 was achieved within 2 hours and gradually decreased during the first 24 hours (Bannenberg et al.
T40 4639-4645 Sentence denotes 2005).
T41 4646-4751 Sentence denotes The formation of LXs is preserved across a wide range of animal species, from fish to humans (Levy 2005).
T42 4752-4803 Sentence denotes This indicates the physiological importance of LXs.
T43 4805-4841 Sentence denotes E-, D-, and T-series resolvins (Rvs)
T44 4842-5080 Sentence denotes Resolvin (Rv) is a pro-resolving mediator that is derived from omega-3 fatty acids, primarily eicosapentaenoic acid (EPA), docosahexaenoic acid (DHA), docosapentaenoic acid (DPA), and clupanodonic acid (Duvall and Levy 2016; Serhan et al.
T45 5081-5087 Sentence denotes 2014).
T46 5088-5234 Sentence denotes Rvs are divided into several subclasses based on the unique aspects of their structure and/or the straight-chain PUFAs from which they are formed.
T47 5235-5293 Sentence denotes Resolvin Ds (RvDs) are metabolites of 22-carbon PUFA, DHA.
T48 5294-5644 Sentence denotes Resolvin Es (RvE) are metabolites of 20 carbons PUFA, EPA; Resolvin Dn-6DPA (RvDn-6DPA) is a DPA isomer, a metabolite of osbond acids; Resolvin Dn-3DPA (RvDn-3DPA) is a DPA isomer, a metabolite of clupanodonic acid; Resolvin Ts (RvT) is a metabolite of clupanodonic acid with 17R-hydroxyl residues, unlike RvDsn-3DPA (all have 17S-hydroxyl residues).
T49 5645-5790 Sentence denotes AT-RvDs, RvD isomers are synthesized by the aspirin-modified COX-2 enzyme to form 17 (R)-hydroxyl rather than the 17 (S)-hydroxyl residue of RvE.
T50 5791-5942 Sentence denotes Cytochrome P450 enzymes that have not yet been characterized may also form this 17 (R)-hydroxy intermediate and contribute to the production of AT-RvE.
T51 5943-6032 Sentence denotes All mentioned Rvs except RvDsn-6DPA are metabolites of omega-3 fatty acids (Serhan et al.
T52 6033-6061 Sentence denotes 2014; Duvall and Levy 2016).
T53 6063-6081 Sentence denotes E-series resolvins
T54 6082-6129 Sentence denotes RvE is a di- or tri-hydroxyl metabolite of EPA.
T55 6130-6203 Sentence denotes To date, four RvEs (RvE1, 18S-RvE1, RvE2, and RvE3) have been discovered.
T56 6204-6345 Sentence denotes COX-2, acetylated by aspirin in hypoxic endothelial cells, introduces oxygen groups into 18R-hydro (peroxy)-eicosapentaenoic acid (18R-HEPE).
T57 6346-6467 Sentence denotes Activated PMN uses 5-LOX to convert 18R-HEPE to 5S (6)-epoxy-18R-HEPE, which is further hydrolyzed to RvE1 (Serhan et al.
T58 6468-6474 Sentence denotes 2000).
T59 6475-6594 Sentence denotes RvE2 is produced by reduction of 18R HEPE products by 5-LOX to 5S-hydroperoxy, 18-hydroxy-EPE in whole blood (Oh et al.
T60 6595-6601 Sentence denotes 2012).
T61 6602-6715 Sentence denotes Unlike RvE1, RvE2 and RvE3 are biosynthesized from 18-HEPE via the 12/15-LOX pathway in eosinophils (Isobe et al.
T62 6716-6723 Sentence denotes 2012b).
T63 6724-6856 Sentence denotes Endogenous RvE1 has been shown to accumulate for between 48 and 72 hours, which is a delayed time point of inflammation (Hong et al.
T64 6857-6863 Sentence denotes 2008).
T65 6864-7031 Sentence denotes RvE2 appeared at the time point corresponding to initial PMN infiltration in rat peritoneal exudate stimulated by zymosan A and decreased within 24 hours (Isobe et al.
T66 7032-7039 Sentence denotes 2012a).
T67 7040-7129 Sentence denotes 18S-RvE1 is produced by 5-LOX and LTA4 hydrolase using 18S-HEPE as a substrate (Oh et al.
T68 7130-7136 Sentence denotes 2011).
T69 7138-7156 Sentence denotes D-series resolvins
T70 7157-7196 Sentence denotes RvD is a polyhydroxy metabolite of DHA.
T71 7197-7354 Sentence denotes To date, six RvDs with different positions of cis-trans isomers, as well as the number, position and chirality of the hydroxyl residues have been discovered.
T72 7355-7456 Sentence denotes D-series Rvs (RvD1-RvD6) are biosynthesized from DHA by the LOX in PMN and macrophages (Serhan et al.
T73 7457-7463 Sentence denotes 2002).
T74 7464-7553 Sentence denotes Hydrolysis of peroxide intermediates derived from two LOXs in DHA produces RvD1 and RvD2.
T75 7554-7645 Sentence denotes On the other hand, the reduction of the peroxide intermediates produces RvD5 (Serhan et al.
T76 7646-7652 Sentence denotes 2002).
T77 7653-7853 Sentence denotes In hypoxic endothelial cells in the presence of aspirin, COX-2 converts DHA to 13-hydroxy-DHA or 17R-hydroxy-DHA and activated PMN converts these products to AT-RvD1, AT-RvD2, and other AT-RvD-series.
T78 7854-8014 Sentence denotes RvD3 and RvD4 are produced through hydrolysis of 4S-hydroperoxy-17S-hydroxy-docosahexaenoic acid, whereas RvD6 is derived from peroxidase of the same precursor.
T79 8015-8275 Sentence denotes In a peritonitis model, the in vivo RvD3 levels after zymosan A challenge increases significantly up to 48 hours after inflammation initiation, while RvD1, RvD2, and RvD5 peak at the early stages of the inflammation termination phase (6–24 hours) (Dalli et al.
T80 8276-8283 Sentence denotes 2013b).
T81 8284-8385 Sentence denotes RvD3 appears to be produced by a subpopulation of macrophages with high 15-LOX activity (Dalli et al.
T82 8386-8393 Sentence denotes 2013b).
T83 8394-8655 Sentence denotes In vivo production of RvD4 in an Staphylococcus aureus injected the dorsal pouch infection model continues for more than 72 hours after sustained release, suggesting that RvD is produced continuously and is under different control from other Rvs (Winkler et al.
T84 8656-8662 Sentence denotes 2016).
T85 8663-8704 Sentence denotes RvD6 kinetics have not been reported yet.
T86 8706-8724 Sentence denotes Resolvin Ts (RvTs)
T87 8725-8875 Sentence denotes In human platelets, COX-2 pre-treated with aspirin or atorvastatin metabolizes omega-3s, DPA and clupanodonic acid (DPAn-3), to 13S-hydroperoxy forms.
T88 8876-8982 Sentence denotes Aspirin and atorvastatin change the activity of COX-2 from cyclooxygenase to hydroperoxide-forming enzyme.
T89 8983-9159 Sentence denotes The intermediates formed are transported to the nearby human neutrophils and perhaps by the activity of the ALOX5 enzyme they are metabolized into four polyhydroxy metabolites:
T90 9160-9319 Sentence denotes RvT1 (7,13R, 20-trihydroxy-DPAn-3); RvT2 (7, 8,13R-trihydroxy-DPAn-3); RvT3 (7,12,13R-trihydroxy-8Z, 10E, 14E, 16Z, 19Z-DPAn-3); RvT4 (7,13R-dihydroxy-DPAn-3).
T91 9320-9469 Sentence denotes These four RvTs are formed by human neutrophils and vascular endothelial cells and are also found in rodents and human infected tissues (Dalli et al.
T92 9470-9483 Sentence denotes 2013a, 2015).
T93 9484-9620 Sentence denotes Recently, the total synthesis of RvT1, RvT2, and its 13R-epimer RvT2, and RvT4 were successfully achieved (Rodriguez and Spur 2020a, b).
T94 9621-9736 Sentence denotes Therefore, it is expected that there will be many physiological and pharmacological research on RvTs in the future.
T95 9738-9746 Sentence denotes Maresins
T96 9747-9951 Sentence denotes Maresins (MaRs) are biosynthesized from DHA by macrophages through the action of 12-LOX, which catalyzes the oxygenation of DHA to 14-hydroperoxidocosahexaenoic acid (14-HpDHA) (Rodriguez and Spur 2020a).
T97 9952-10084 Sentence denotes This is followed by reduction to 13S, 14S-epoxy-maresin, which is further modified in human macrophages to produce MaR1 (Deng et al.
T98 10085-10189 Sentence denotes 2014) and conversion of 13S, 14S-epoxy-maresin by soluble epoxide hydrolase to produce MaR2 (Deng et al.
T99 10190-10196 Sentence denotes 2014).
T100 10197-10318 Sentence denotes Maresins, like the many other SPM members mentioned, have anti-inflammatory, protective and healing-promoting properties.
T101 10319-10567 Sentence denotes In a study using a murine model of respiratory distress syndrome, and initial in vivo production of MaR1was detected during platelet-neutrophil interactions, and its levels increased significantly within 2 hours and peaked at 24 hours (Dalli et al.
T102 10568-10575 Sentence denotes 2013c).
T103 10576-10699 Sentence denotes Measurement of 17-HDHA in tissue is used as a marker for the level of activation of the MaR production pathway (Wang et al.
T104 10700-10706 Sentence denotes 2015).
T105 10707-10884 Sentence denotes Maresin-like lipid mediators MaR-L1 and MaR-L2 are produced by white blood cells and platelets and rescue the reparative function of macrophages damaged by diabetes (Hong et al.
T106 10885-10891 Sentence denotes 2014).
T107 10892-10942 Sentence denotes Total synthesis of MaRs has not yet been reported.
T108 10944-10960 Sentence denotes Protectins (PDs)
T109 10961-11041 Sentence denotes Protectin D1 (PD1), also known as neuroprotectin D1 (NPD1), is derived from DHA.
T110 11042-11109 Sentence denotes DHA is a component of fish oil and the most important omega-3 PUFA.
T111 11110-11297 Sentence denotes Like other members of PUFA metabolites specialized pro-resolving mediators class, PD1 exerts potent anti-inflammatory and anti-apoptotic/neuroprotective biological activities (Hong et al.
T112 11298-11316 Sentence denotes 2003; Bazan 2007).
T113 11317-11466 Sentence denotes PD1 accumulates in the ipsilateral hemisphere of the brain after focal ischemia and has been shown to take part in wound healing and neuroprotection.
T114 11467-11586 Sentence denotes 15-LOX can acts 17S-HpDHA to produce the isomers of PD1, 10S, 17S-diHDHA (PDx), which also have pro-resolving activity.
T115 11587-11683 Sentence denotes PD1 production peaks at 12 hours in a zymosan A-induced rat peritonitis model (Bannenberg et al.
T116 11684-11690 Sentence denotes 2005).
T117 11691-11784 Sentence denotes Other PDs with similar activity include PDX; 20-hydroxy-PD1; and 10-epi-PD1 (Shinohara et al.
T118 11785-11814 Sentence denotes 2012; Balas and Durand 2016).
T119 11815-11888 Sentence denotes The activity of 17-epi-PD1, a PD1-like metabolite, has not been reported.
T120 11889-12032 Sentence denotes It should be noted that Neuroprotectin A and B, the bicyclohexapeptides, are structurally and mechanically different from PDs (Kobayashi et al.
T121 12033-12039 Sentence denotes 2001).
T122 12040-12125 Sentence denotes The total synthesis of PDX and PD1 methyl ester epimer was successful (Dayaker et al.
T123 12126-12146 Sentence denotes 2014; Sanceau et al.
T124 12147-12153 Sentence denotes 2019).
T125 12155-12169 Sentence denotes SPMs receptors
T126 12170-12233 Sentence denotes Herein, we briefly describe each known SPMs receptors (Fig. 2).
T127 12234-12458 Sentence denotes Previous studies have demonstrated that pro-resolving activities of SPMs occur through activation of one or more G protein-coupled receptors (GPCRs), suitable receptors for several types of SPMs have not yet been identified.
T128 12459-12661 Sentence denotes Four GPCRs have been reported as receptors for RvD1 and RvE1; however, it has not been determined whether other Rvs and PDs such as RvE2, RvE4, RvD2, RvD3, PDs, and MaRs act on these GPCRs (Arita et al.
T129 12662-12695 Sentence denotes 2005, 2007; Krishnamoorthy et al.
T130 12696-12702 Sentence denotes 2010).
T131 12703-12871 Sentence denotes For recent and specific physiological actions of these receptors and research data in KO mice, we would like to refer to other reviews and references there (Park et al.
T132 12872-12887 Sentence denotes 2020; Im 2012).
T133 12889-12908 Sentence denotes Chemerin receptor 1
T134 12909-13100 Sentence denotes Chemerin receptor 1 (chemerin1, ChemR23, or ERV1) is expressed on a wide range of immune cells, including monocytes, macrophages, natural killer cells, bone marrow cells, and dendritic cells.
T135 13101-13187 Sentence denotes Besides, ERV1 has been identified in adipocytes and endothelial cells (Luangsay et al.
T136 13188-13194 Sentence denotes 2009).
T137 13195-13301 Sentence denotes ERV1 was initially classified as an orphan GPCR with homology to the formyl peptide receptor (Gantz et al.
T138 13302-13366 Sentence denotes 1996) and the anaphylatoxin C3a and C5a receptors (Samson et al.
T139 13367-13478 Sentence denotes 1998) until recently when it was discovered to be a receptor for the chemotactic protein chemerin (Meder et al.
T140 13479-13485 Sentence denotes 2003).
T141 13486-13626 Sentence denotes In addition to chemerin, RvE1 was identified as a second endogenous agonist through a screening program against the GPCR panel (Arita et al.
T142 13627-13633 Sentence denotes 2007).
T143 13634-13802 Sentence denotes ERV1 (chemokine like receptor 1, also known as CMKLR1) is a receptor for RvE1, which has been shown to bind more strongly than chemerin (a peptide ligand) (Arita et al.
T144 13803-13824 Sentence denotes 2005; Wittamer et al.
T145 13825-13831 Sentence denotes 2004).
T146 13832-13987 Sentence denotes ERV1 overexpressing mice showed a large increase in phagocytosis upon decreased neutrophil inhibition and decreased neutrophil infiltration (Herrera et al.
T147 13988-13994 Sentence denotes 2015).
T148 13995-14097 Sentence denotes Also, RvE2 is a partial agonist compared to RvE1 in CHO-chemerin1 β-arrestin recruitment (Isobe et al.
T149 14098-14105 Sentence denotes 2012a).
T150 14106-14241 Sentence denotes However, since there is no additional information on this ligand, further investigation of potential ligand-receptor pairs is required.
T151 14243-14296 Sentence denotes N-formyl peptide receptor 2/LX A4 receptor (FPR2/ALX)
T152 14297-14452 Sentence denotes Originally FPR2 was classified as an FPR receptor due to its activation by the low-affinity endogenous agonist N-formyl methionyl peptide (fMLP) (Ye et al.
T153 14453-14459 Sentence denotes 1992).
T154 14460-14698 Sentence denotes The receptor was reclassified as FPR2/ALX, as LXA4 exhibited the highest affinity of all FPR2/ALX endogenous agonists through screening of various receptor ligands using radiolabelled [3H]-LXA4 and subsequent GTPase activity (Fiore et al.
T155 14699-14717 Sentence denotes 1994; Brink et al.
T156 14718-14724 Sentence denotes 2003).
T157 14725-14851 Sentence denotes Binding of LXA4 leads to the stimulation of monocyte chemotaxis, macrophage differentiation, and efferocytosis (Maderna et al.
T158 14852-14882 Sentence denotes 2010; Maddox and Serhan 1996).
T159 14883-15007 Sentence denotes LXA4 also reduces the adaptive immune response by reducing memory B cell antibody production and proliferation (Ramon et al.
T160 15008-15014 Sentence denotes 2014).
T161 15015-15185 Sentence denotes Endogenous and exogenous lipids, peptides, and proteins have been shown to bind and activate FPR2/ALX to produce inflammatory and anti-inflammatory effects (Takano et al.
T162 15186-15205 Sentence denotes 1997; Cooray et al.
T163 15206-15212 Sentence denotes 2013).
T164 15213-15372 Sentence denotes Both the LXs and Rvs families, including LXA4, AT-LXA4 (15-epi-LXA4), RvD1, AT-RvD1 (17-epi-RvD1), and Annexin A1 (ANXA1) activate receptors with high potency.
T165 15373-15512 Sentence denotes On the other hand, endogenous antagonists, including serum amyloid A (SAA) and cathelicidin (LL-37) have been identified (Bozinovski et al.
T166 15513-15529 Sentence denotes 2012; Wan et al.
T167 15530-15536 Sentence denotes 2011).
T168 15538-15543 Sentence denotes GPR18
T169 15544-15642 Sentence denotes GPR18 was discovered as a receptor for RvD2 through GPCR-β-arrestin-based screening (Chiang et al.
T170 15643-15711 Sentence denotes 2015), and the receptor was referred to as DRV2/GPR18 (Chiang et al.
T171 15712-15725 Sentence denotes 2017, 2019a).
T172 15726-15777 Sentence denotes Besides, several other ligands activate DRV2/GPR18.
T173 15778-16093 Sentence denotes These include endogenous ligands such as N-arachidonylglycine (NAGly), anandamide, a metabolite of the endocannabinoid anandamide, synthetic ligands such as abnormal-cannabidiol (Abn-CBD), and O-1918, a partial agonist, which can be used as a pharmacological tool to inhibit DRV2/GPR18 signalling (Offertaler et al.
T174 16094-16112 Sentence denotes 2003; Kohno et al.
T175 16113-16119 Sentence denotes 2006).
T176 16120-16197 Sentence denotes GPR18 is abundantly expressed in PMNs, monocytes and macrophages (Wang et al.
T177 16198-16204 Sentence denotes 2014).
T178 16205-16571 Sentence denotes In addition to the resolution of inflammation, while GPR18 has low structural similarity to the cannabinoid receptors CB1, CB2, and GPR55, it responds to endogenous and synthetic cannabinoid ligands including n-arachidonoyl ethanolamine (AEA), 2-arachidonoyl glycerol (2-AG), Δ9-tetrahydrocannabinol (Δ9-THC), and, arachidonoylcyclopropylamide (ACPA) (McHugh, 2012).
T179 16572-16835 Sentence denotes Also interestingly, GPR18 is structurally very similar to EBV-induced receptor 2 (EBI2), whose expression is increased more than 20 times in Epstein-Barr virus (EBV) infected cells, and is a GPCR receptor clustered together in the 13q32 (Rosenkilde et al., 2006).
T180 16837-16842 Sentence denotes GPR32
T181 16843-16969 Sentence denotes GPR32 is primarily expressed in human PMN, monocytes, adipose tissue and vascular endothelial cells (Sansbury and Spite 2016).
T182 16970-17198 Sentence denotes RvD1 was identified as a potential agonist due to the activation of GPR32, where [3H]-RvD1 binds to human leukocytes and significantly lowers TNF-α-stimulated NF-κB signalling in GPR32 overexpressing cells (Krishnamoorthy et al.
T183 17199-17205 Sentence denotes 2010).
T184 17206-17342 Sentence denotes Although RvD1 has a higher affinity for GPR32 than FPR2/ALX, its interaction with GPR32 has not been extensively studied (Norling et al.
T185 17343-17349 Sentence denotes 2012).
T186 17350-17465 Sentence denotes This could be since GPR32 exists as a pseudogene in rodents, which makes animal testing in principle inappropriate.
T187 17466-17660 Sentence denotes Treatment of inflammatory macrophages expressing GPR32 with RvD1 enhanced the pro-resolving phenotype to increase phagocytosis and decrease the secretion of inflammatory cytokines (Schmid et al.
T188 17661-17667 Sentence denotes 2016).
T189 17668-17792 Sentence denotes Also, GPR32 was also involved when during the inhibition of the EMT phenomenon of lung cancer cell lines by RvD1 (Lee et al.
T190 17793-17799 Sentence denotes 2013).
T191 17800-17939 Sentence denotes Additionally, RvD3, AT-RvD3, and RvD5 have all been shown to activate GPR32 in a recombinant system of β-arrestin recruitment (Dalli et al.
T192 17940-17960 Sentence denotes 2013b; Chiang et al.
T193 17961-17967 Sentence denotes 2012).
T194 17968-18040 Sentence denotes These facts suggest the potential redundancy of ligands acting on GPCRs.
T195 18042-18047 Sentence denotes GPR37
T196 18048-18218 Sentence denotes GPR37 or Parkin-related endothelin-like receptor (Pael-R) was originally discovered through genomic library screening to find new neuropeptide receptors (Marazziti et al.
T197 18219-18225 Sentence denotes 1997).
T198 18226-18376 Sentence denotes The GPR37 receptor is primarily expressed in the brain and is associated with neurological disorders such as Parkin’s disease and autism (Lopes et al.
T199 18377-18383 Sentence denotes 2015).
T200 18384-18537 Sentence denotes Mutations within GPR37 affect various autism spectrum disorders, regulation of dopamine reuptake and oligodendrocyte differentiation (Fujita-Jimbo et al.
T201 18538-18560 Sentence denotes 2012; Marazziti et al.
T202 18561-18578 Sentence denotes 2007; Yang et al.
T203 18579-18585 Sentence denotes 2016).
T204 18586-18784 Sentence denotes PD1 is considered as a ligand for GPR37 because it induced a significant increase in intracellular calcium in HEK293 cells overexpressing GPR37 and murine peritoneal-derived macrophages (Bang et al.
T205 18785-18791 Sentence denotes 2018).
T206 18792-19024 Sentence denotes Based on the fact that Gpr37-/- mice exhibited increased apoptosis and infarct size, it has recently been suggested that GPR37 is also involved in cell damage protection and inflammation after ischemic stroke (McCrary et al., 2019).
T207 19025-19241 Sentence denotes However, due to its clear role in the central nervous system (CNS), the development of a therapeutic agent targeting GPR37 requires a balance between the effect on the central nervous system and therapeutic benefits.
T208 19243-19259 Sentence denotes Leukotriene BLT1
T209 19260-19516 Sentence denotes BLT1 has also been shown to be a receptor for RvE1 although its clone, high-affinity leukotriene B4 (LTB4) is a potent lipid inflammatory chemoattractant, inducing T helper cell chemotaxis and early effector T cell recruitment through BLT1 (Yokomizo et al.
T210 19517-19535 Sentence denotes 1997; Arita et al.
T211 19536-19542 Sentence denotes 2007).
T212 19543-19761 Sentence denotes BLT1 shares 21% sequence identity with chemerin1; while this value is relatively low, selective BLT1 antagonist U-75,302 has been demonstrated to replace the binding of [3H]-RvE1 to the human PMN membrane (Arita et al.
T213 19762-19768 Sentence denotes 2007).
T214 19769-19951 Sentence denotes Besides, although RvE1 is 100 times less potent than LTB4, it inhibited adenylate cyclase activity and induced intracellular calcium mobilization in HEK293 cells overexpressing BLT1.
T215 19952-20151 Sentence denotes These data indicate the role of RvE1 in reducing BLT1-induced inflammation by RvE1 acting as a partial agonist that competes with LTB4-mediated NF-κB activation and calcium mobilization (Arita et al.
T216 20152-20158 Sentence denotes 2007).
T217 20159-20363 Sentence denotes Activation of BLT1 by RvE1 also serves as a feedback mechanism for other SPMs, including increased production of LXA4 in the FPR2/ALX-mediated resolution of allergic pulmonary inflammation (Haworth et al.
T218 20364-20370 Sentence denotes 2008).
T219 20371-20589 Sentence denotes RvE2 was identified as an additional BLT1 agonist, and the β-arrestin assay showed that RvE2 blocked LTB4-mediated β-arrestin signalling with similar efficacy to RvE1, indicating direct competition with LTB4 (Oh et al.
T220 20590-20596 Sentence denotes 2012).
T221 20597-20725 Sentence denotes Various pro-resolving roles of RvE2 have been proposed, including regulation of PMN infiltration and IL-10 production (Oh et al.
T222 20726-20732 Sentence denotes 2012).
T223 20733-20871 Sentence denotes However, while RvE1 promotes NADPH oxidase-mediated ROS production through the BLT1, RvE2 and RvE3 do not exhibit this effect (Unno et al.
T224 20872-20878 Sentence denotes 2018).
T225 20880-20917 Sentence denotes Activation of other receptors by SPMs
T226 20918-20988 Sentence denotes A few studies have reported the possibility of other GPCR involvement.
T227 20989-21097 Sentence denotes Among them, GPR101 mediates the pro-resolving effects of RvD5n-3 DPA in arthritis and infection (Flak et al.
T228 21098-21104 Sentence denotes 2020).
T229 21105-21197 Sentence denotes Besides, SPMs have been reported to activate non-GPCRs receptors, such as nuclear receptors.
T230 21198-21384 Sentence denotes In a dose-dependent manner, PD1 enhances PPARγ transcriptional activation reporter activity in human neuron-glia (HNG) cells co-transfected with hPPARγ-GAL4 and MH100-tk-Luc (Zhao et al.
T231 21385-21391 Sentence denotes 2011).
T232 21392-21509 Sentence denotes This suggests that PD1 is capable of enhancing the peroxisome proliferator-activated receptor gamma (PPARγ) (Fig. 2).
T233 21510-21608 Sentence denotes The transcriptional activity of PPARγ was significantly increased after treatment with 100 nM PD1.
T234 21609-21840 Sentence denotes RvD1 was also assumed to be a ligand for PPARγ and inhibited IκBα degradation and NF-κB p65 nuclear translocation in an LPS-induced lung injury model, which was partially reversed by the PPARγ inhibitor GW9662 (Fig. 2) (Liao et al.
T235 21841-21847 Sentence denotes 2012).
T236 21848-21963 Sentence denotes Recently, it has been reported that LXA4 binds to the nuclear aryl hydrocarbon receptor (AhR) (Fig. 2) (Asha et al.
T237 21964-21970 Sentence denotes 2020).
T238 21971-22033 Sentence denotes A GPCR that acts directly on MaR1 has not yet been identified.
T239 22034-22356 Sentence denotes However, MaR1 blocks TRPV1-mediated currents in neurons, acts as a ligand for the retinoid-associated orphan receptor α (RORα), and inhibits TLR4 signalling (Fig. 2) (Park 2015), Chiang et al. found that MaR1 can activate LGR6, a member of the glycoprotein hormone receptor subfamily of rhodopsin-like GPCRs (Chiang et al.
T240 22357-22500 Sentence denotes 2019b), which initiates cAMP, impedance changes, and stimulate an innate immune response against PMNs, monocytes and macrophages (Chiang et al.
T241 22501-22508 Sentence denotes 2019b).
T242 22510-22562 Sentence denotes Role of SPMs and Their Receptors in Virus Infections
T243 22563-22726 Sentence denotes Because viruses are obligate intracellular parasites, viruses must enter target cells and multiply using host cell machinery to produce progeny viruses (Ryu 2017).
T244 22727-22827 Sentence denotes The various stages involved in viral growth that occur inside cells are called the viral life cycle.
T245 22828-22919 Sentence denotes The viral life cycle can be divided into three stages: entry, genome replication, and exit.
T246 22920-23048 Sentence denotes Entry can be subdivided into attachment, penetration and uncoating, and exit can be subdivided into virion assembly and release.
T247 23049-23090 Sentence denotes Genome replication differs by virus type.
T248 23091-23276 Sentence denotes Many studies are showing that SPMs regulate the inflammatory response caused by viral infections, but studies on the effects of SPMs on the viral life cycle have been difficult to find.
T249 23277-23311 Sentence denotes There have a few reports recently.
T250 23312-23646 Sentence denotes For example, among SPMs, LXA4 modulates Kaposi’s Sarcoma-Associated Herpesvirus (KSHV) life cycle through chromatin modulation and hedgehog signalling to destabilize the latency of herpes virus and decreases the expression of programmed death-ligand 1 (PD-L1) in Kaposi’s Sarcoma, thereby reducing immune evasion (Fig. 3) (Asha et al.
T251 23647-23653 Sentence denotes 2020).
T252 23654-23793 Sentence denotes On the other hand, there are not a few reports that the receptors mentioned above for SPMs act as receptors in virus infection (see below).
T253 23794-23990 Sentence denotes So, in this section, we will discuss the effect of SPMs on the virus and the viral infection-induced inflammation and mention how the receptors of SPMs affect the life cycle of the virus (Fig. 3).
T254 23992-24001 Sentence denotes Influenza
T255 24002-24146 Sentence denotes Influenza viruses are a well-studied model for understanding the role of inflammation resolution mediators and the mechanism of viral infection.
T256 24147-24233 Sentence denotes This is because different viruses elicit different host immune responses and outcomes.
T257 24234-24457 Sentence denotes From studies comparing more virulent influenza virus strains to less virulent strains, it has been reported that pro-resolving mediators have an inverse correlation with the biological activity of the virus (Cilloniz et al.
T258 24458-24464 Sentence denotes 2010).
T259 24465-24567 Sentence denotes The more toxic strains of influenza induced reduction of LXs, which increased the spread of the virus.
T260 24568-24718 Sentence denotes LXB4 recently improved IgG production in B cells from donors vaccinated against influenza virus, suggesting potential as a novel adjuvant. (Kim et al.
T261 24719-24725 Sentence denotes 2018).
T262 24726-24870 Sentence denotes Annexin is the most abundant host cell protein in the virion, and annexin A1 (ANXA1) contributes to influenza-induced toxicity (Tcherniuk et al.
T263 24871-24877 Sentence denotes 2016).
T264 24878-25089 Sentence denotes That is, during virus entry into the host cell, viral hemagglutinin (HA) not only binds sialic acid but also ANXA1 binds to FPR2, resulting in activation of ERK2 and increased viral replication (Tcherniuk et al.
T265 25090-25096 Sentence denotes 2016).
T266 25097-25130 Sentence denotes RvD1 and LXA4 also activate FPR2.
T267 25131-25303 Sentence denotes It is still unknown whether RvD1 and LXA4 compete with viral annexin at the receptors site leads to the prevention of viral infection or the promotion of viral replication.
T268 25304-25405 Sentence denotes However, it is reported that AT-RvD1 reduces inflammation caused by the viral infection. (Wang et al.
T269 25406-25412 Sentence denotes 2017).
T270 25413-25683 Sentence denotes Increased SAA in recurrent acute exacerbations of COPD caused by bacterial and virus coinfection acts as a functional agonist of FPR2/ALX, antagonizing the protective action of FPR2/ALX by AT-RvD1, promoting chemotaxis of neutrophils and prolonging survival (Wang et al.
T271 25684-25690 Sentence denotes 2018).
T272 25691-25805 Sentence denotes There are no reports of direct research on whether RvD1, the same family as AT-RvD1, inhibits the influenza virus.
T273 25806-25896 Sentence denotes However, it promotes inflammation and removal of bacteria caused by a bacterial infection.
T274 25897-26024 Sentence denotes For example, RvD1 relieves lung inflammation and promotes the elimination of untypeable Haemophilus influenza (Croasdell et al.
T275 26025-26031 Sentence denotes 2016).
T276 26032-26185 Sentence denotes ChemR23, a receptor for RvE1, relieves lung inflammation and enhances antiviral immunity in a mouse model of acute viral pneumonia (Bondue et al., 2011).
T277 26186-26299 Sentence denotes Therefore, it would be fascinating to study whether RvE1 is effective in pneumonia caused by the influenza virus.
T278 26300-26369 Sentence denotes PD1 has pivotal and multiple roles in regulating viral pathogenicity.
T279 26370-26443 Sentence denotes Influenza strains, such as the lethal H5N1, down-regulate PD1 (Tam et al.
T280 26444-26450 Sentence denotes 2013).
T281 26451-26565 Sentence denotes There is an inverse correlation between the level of PD1 and the level of pathogenicity of various virus isolates.
T282 26566-26667 Sentence denotes In addition to the host’s inflammatory response, PD1 has a direct antiviral action against influenza.
T283 26668-26850 Sentence denotes Both PD1 and its isomer PDX (LOX-mediated double oxygenation) limit viral replication by interfering with the viral RNA nuclear transport mechanism (Fig. 3) (Imai 2015; Morita et al.
T284 26851-26882 Sentence denotes 2013; Baillie and Digard 2013).
T285 26883-27092 Sentence denotes Treatment of infected mice with PD1 improves survival, even if administered 48 hours after the onset of infection when the current antiviral therapy is no longer significantly effective (Fig. 4) (Morita et al.
T286 27093-27108 Sentence denotes 2013; Ng et al.
T287 27109-27115 Sentence denotes 2010).
T288 27117-27137 Sentence denotes Herpes simplex virus
T289 27138-27387 Sentence denotes Herpesviruses 1 and 2 (HSV-1 and HSV-2), with the taxonomic names human alphaherpesvirus 1 and human alphaherpesvirus 2, are the most common causes of human viral infections among the members of the human Herpesviridae family (Chayavichitsilp et al.
T290 27388-27394 Sentence denotes 2009).
T291 27395-27734 Sentence denotes Herpes simplex virus (HSV) ocular infection represents another example in which local control of the virus stems from a robust inflammatory response with long-term consequences of chronic inflammation, including the possibility of final blindness due to interstitial keratitis that persists even after the viral infection has been cleared.
T292 27735-28029 Sentence denotes In animals with HSV, topical administration of RvE1 reduced the influx of CD4+ T cells (both TH1 cells and TH17 cells) and neutrophils, decreased production of inflammatory cytokines including IFNγ and IL-6, and increased levels of the anti-inflammatory cytokine IL-10 (Fig. 4) (Rajasagi et al.
T293 28030-28036 Sentence denotes 2011).
T294 28037-28091 Sentence denotes Overall, RvE1 significantly reduced stromal keratitis.
T295 28092-28160 Sentence denotes Similar results were demonstrated with PD1 (Fig. 4) (Rajasagi et al.
T296 28161-28167 Sentence denotes 2013).
T297 28168-28468 Sentence denotes Besides, AT-RvD1 treatment significantly reduced the degree of corneal angiogenesis and the severity of stromal keratitis lesions, and AT-RvD1 treated mice had fewer Th1 and Th17 cells in the infected cornea, as well as the reduced number of inflammatory cells, including neutrophils (Rajasagi et al.
T298 28469-28475 Sentence denotes 2017).
T299 28477-28557 Sentence denotes Respiratory syncytial virus, human immunodeficiency virus, and hepatitis C virus
T300 28558-28811 Sentence denotes Respiratory syncytial virus (RSV), also known as human respiratory cell fusion virus (HRSV) and human orthopneumovirus, is a virus that causes respiratory infections in which infected mucosal cells fuse to form a syncytium (Schweitzer and Justice 2020).
T301 28812-28941 Sentence denotes It is the leading cause of lower respiratory tract infections and hospital visits in infancy and childhood (Read and Bosco 2020).
T302 28942-29112 Sentence denotes RSV infection results in bronchiolitis, which is classically caused by activated macrophages and eventually resolved by alternatively activated macrophages (Shirey et al.
T303 29113-29119 Sentence denotes 2010).
T304 29120-29293 Sentence denotes The promotion of these two alternative macrophage fates appears to be related to RSV-induced COX-2 and LXA4 and RvE1-mediated protective measures (Fig. 4) (Richardson et al.
T305 29294-29313 Sentence denotes 2005; Shirey et al.
T306 29314-29320 Sentence denotes 2014).
T307 29321-29594 Sentence denotes Also, although it does not directly act on the virus, RvD1 inhibits inflammatory signal transduction by polyinosinic-polycytidylic acid, an analogue of RNAs derived from respiratory viruses such as RSV, and the action of RvD1 is mediated by FPR2/ALX and GPR32 (Hsiao et al.
T308 29595-29601 Sentence denotes 2014).
T309 29602-29764 Sentence denotes These reports suggest the critical role of SPMs and lipid mediator class shift in the host’s response to RSV in the initial control and final infection clearance.
T310 29765-29945 Sentence denotes Human immunodeficiency virus (HIV) is a lentivirus (a subgroup of retroviruses) and are classified into two based on the genetic characteristics and viral antigen, HIV-1 and HIV-2.
T311 29946-30062 Sentence denotes HIV infection may progress to acquired immunodeficiency syndrome (AIDS), a progressive failure of the immune system.
T312 30063-30181 Sentence denotes Over time, AIDS causes life-threatening opportunistic infections and a condition in which cancer thrives (Douek et al.
T313 30182-30201 Sentence denotes 2009; Powell et al.
T314 30202-30208 Sentence denotes 2016).
T315 30209-30522 Sentence denotes When co-cultured with HIV-1 infected mononuclear cells and human glial cells (astrocytoma, glial and primary human astrocyte), tumour necrosis factor alpha (TNF-α) and interleukin-1β are produced, and large amounts of LTB4, LTD4, LXA4, and PAF, were also found in media from this co-culture (Fig. 4) (Genis et al.
T316 30523-30529 Sentence denotes 1992).
T317 30530-30640 Sentence denotes So far, this is the only in vitro study to prove, that LXs are produced in direct response to viral infection.
T318 30641-30716 Sentence denotes However, the role of LXs in this infection model has not been investigated.
T319 30717-30942 Sentence denotes Synthetic peptides derived from human immunodeficiency virus type 1 gp120 activate the 7-transmembrane GPCR FPR2/ALX, down-regulating the expression and function of chemokine receptors CCR5 and CXCR4 in monocytes (Deng et al.
T320 30943-30949 Sentence denotes 1999).
T321 30950-31040 Sentence denotes FPR2/ALX acts as an efficient core receptor for the primary isolate of HIV (Shimizu et al.
T322 31041-31047 Sentence denotes 2008).
T323 31048-31158 Sentence denotes Viral entries through the alternative core receptors (CoR) CCR3 and FPR2/ALX depend on the HIV type 1 subtype.
T324 31159-31304 Sentence denotes Viruses pseudotyped with subtype A and C Env proteins use the recently described alternative CoR FPR2 more efficiently than CCR3 (Nedellec et al.
T325 31305-31311 Sentence denotes 2009).
T326 31312-31347 Sentence denotes ChemR23 also acts as a CoR for HIV.
T327 31348-31487 Sentence denotes At this time, HIV-1 and HIV-2 appear to use the N-terminus and the second extracellular loop of ChemR23 during infection (Martensson et al.
T328 31488-31494 Sentence denotes 2006).
T329 31495-31622 Sentence denotes As mentioned above, research is needed to determine the role of SPMs that act as ligands for FPR2 and ChemR23 in HIV infection.
T330 31623-31769 Sentence denotes Hepatitis C virus (HCV) is a positive-sense single-stranded RNA virus of the family Flaviviridae with a small (55–65 nm size) envelope (Lee et al.
T331 31770-31776 Sentence denotes 2017).
T332 31777-31931 Sentence denotes The HCV is the cause of hepatitis C and some cancers such as liver cancer (hepatocellular carcinoma, abbreviated HCC) and lymphoma in humans (Ferri et al.
T333 31932-31960 Sentence denotes 2015; Rusyn and Lemon 2014).
T334 31961-32041 Sentence denotes To date, there appears to be no report on the effectiveness of SPMs against HCV.
T335 32042-32189 Sentence denotes However, HCV peptide (C5A), an amphiphilic α-helix peptide of HCV, is an activator of the N-formyl peptide receptor in human phagocytes (Lin et al.
T336 32190-32196 Sentence denotes 2011).
T337 32197-32287 Sentence denotes This suggests the possibility of interaction between RvD1 and LXA4, FPR families, and HCV.
T338 32288-32410 Sentence denotes Vitamin D metabolites inhibit HCV and upregulate GPR37 gene expression, which induces cellular autophagy (Gutierrez et al.
T339 32411-32417 Sentence denotes 2014).
T340 32418-32549 Sentence denotes PD1 was recently proposed as a new ligand for GPR37, and some studies suggest a possible relationship between PD1 and HCV (Fig. 4).
T341 32550-32700 Sentence denotes SAA also has antiviral effects against HCV, however, it induces chronic inflammation through FPR2/ALX, causing liver damage (Abouelasrar Salama et al.
T342 32701-32707 Sentence denotes 2019).
T343 32708-32873 Sentence denotes Although research has not been conducted yet, RvD1 and LXA4, which inhibit the action of SAA, are likely to suppress liver damage caused by SAA during HCV infection.
T344 32875-32885 Sentence denotes SARS-CoV-2
T345 32886-33172 Sentence denotes Severe acute respiratory syndrome Coronavirus 2 (SARS-CoV-2) refers to a coronavirus strain that causes 2019 coronavirus disease (COVID-19), a respiratory disease that is the cause of the COVID-19 pandemic (Coronaviridae Study Group of the International Committee on Taxonomy of, 2020).
T346 33173-33301 Sentence denotes SARS-CoV-2 is an RNA virus that infects the lungs and causes deaths through complications such as cytokine storms (Goldin et al.
T347 33302-33308 Sentence denotes 2020).
T348 33309-33487 Sentence denotes The anti-inflammatory action of mesenchymal stem cells is well known, and it is believed that these mesenchymal stem cells exhibit anti-inflammatory action through PGE2 and LXA4.
T349 33488-33670 Sentence denotes These lipids mediators alleviate the SARS-CoV-2 cytokine storm, while arachidonic acid, dihomo-gamma-linolenic acid, and gamma-linolenic acid inactivate enveloped viruses (Das 2020).
T350 33671-33805 Sentence denotes Obesity is a risk factor for SARS-CoV-2 infection, and a BMI of 30 kg/m2 increases the risk of infection by 61% (Bello-Chavolla et al.
T351 33806-33812 Sentence denotes 2020).
T352 33813-33961 Sentence denotes This is likely due to a deficiency of SPMs in obese patients, and this deficiency promotes adverse reactions during SARS-CoV-2 infection (Pal et al.
T353 33962-33968 Sentence denotes 2020).
T354 33969-34094 Sentence denotes LXA4, Elovanoid-N32 or RvD6 isomers reduced expression of angiotensin-converting enzyme 2 (ACE2), but NDP1 did not reduce it.
T355 34095-34265 Sentence denotes These lipids mediators also counteract the binding of the receptor-binding domain (RBD) of SARS-CoV-2 spike (S) protein to the injured cornea (Figs. 3 and 4) (Pham et al.
T356 34266-34272 Sentence denotes 2020).
T357 34273-34398 Sentence denotes Elovanoid-N32 or RvD6 isomers also attenuated the expression of cytokines involved in a cytokine storm and hyperinflammation.
T358 34399-34629 Sentence denotes Based on previous study results that have demonstrated SPMs as potential therapeutic targets for SARS-CoV-2 infection, studies and review on the use of fish oil, an SPMs precursor, as an adjuvant are in progress. (Torrinhas et al.
T359 34630-34649 Sentence denotes 2020; Rogero et al.
T360 34650-34656 Sentence denotes 2020).
T361 34657-34929 Sentence denotes SPMs and soluble epoxide hydrolase inhibitors are currently in clinical trials for other inflammatory diseases and can be quickly converted and used for SARS-CoV-2 management through the removal of cellular debris and inhibition of inflammatory cytokines (Panigrahy et al.
T362 34930-34936 Sentence denotes 2020).
T363 34938-34949 Sentence denotes Conclusions
T364 34950-35039 Sentence denotes Recently, a new group of molecules, named SPMs that resolve inflammation were elucidated.
T365 35040-35162 Sentence denotes Further, in efforts to investigate and demonstrate their mechanism of action, their receptors are slowly being discovered.
T366 35163-35240 Sentence denotes As an additional milestone, SPMs were detected in several biological samples.
T367 35241-35414 Sentence denotes However, the investigation of the pharmacological principle based on GPCR for SPMs under various physiological and pathological conditions is insufficient (Psychogios et al.
T368 35415-35433 Sentence denotes 2011; Lukiw et al.
T369 35434-35440 Sentence denotes 2005).
T370 35441-35555 Sentence denotes Further research is needed on specific molecular targets of omega-3 fatty acids such as RvE2, RvD2, PDs, and MaRs.
T371 35556-35830 Sentence denotes The interaction between the host immune system and infectious viral attacks represents new opportunities for the utilization of SPMs. The use of SPMs is likely to help regulate abnormal viral-mediated inflammation and prevent complications such as SARS-CoV-2 cytokine storm.
T372 35831-35913 Sentence denotes Besides, SPMs play parts in restoring tissue homeostasis, including wound healing.
T373 35914-36019 Sentence denotes Therefore, they are very likely to have therapeutic effects against the sequelae of SARS-CoV-2 infection.
T374 36020-36110 Sentence denotes Both inflammation and resolution of inflammation are vital processes of the immune system.
T375 36111-36339 Sentence denotes Therefore, a balance between the need for a sufficient immune response to clear the infection and the rapid decline of immune response to prevent host damage presents a novel opportunity for therapeutic exploitation of the SPMs.
T376 36340-36445 Sentence denotes Further research is needed to identify opportunities to optimize this balance in human viral infectivity.
T377 36446-36625 Sentence denotes Among them, it will be exciting to study how the receptors of SPMs, which act as coreceptors during virus infection, play a role in virus infection and virus-induced inflammation.
T378 36626-36774 Sentence denotes Finally, although not mentioned in this review, the author would like to emphasize that SPMs are effective in treating bacterial infections as well.
T379 36775-36949 Sentence denotes In nutshell, SPMs shows excellent potential as novel therapeutic options for severe inflammation and tissue damage caused by viral infections, including SARS-CoV-2 infection.
T380 36950-36989 Sentence denotes Fig. 1 Inflammation-resolution process.
T381 36990-37079 Sentence denotes Modified from Fullerton and Gilroy (Fullerton and Gilroy 2016), and Lee et al. (Lee 2018)
T382 37080-37112 Sentence denotes Fig. 2 SPMS and their receptors.
T383 37113-37205 Sentence denotes Blue dotted lines mean activation of receptors, and red dotted lines inhibition of receptors
T384 37206-37253 Sentence denotes Fig. 3 Effects of SPMS on the virus life cycle.
T385 37254-37291 Sentence denotes Please refer to the text for details.
T386 37292-37343 Sentence denotes RTA: replication and transcription activator, KSHV:
T387 37344-37383 Sentence denotes Kaposi’s sarcoma-associated herpesvirus
T388 37384-37463 Sentence denotes Fig. 4 Effects of SPMS on the viruses and viral infection-induced inflammation.
T389 37464-37506 Sentence denotes Green lines mean direct antiviral effects.
T390 37507-37609 Sentence denotes Blue dotted lines mean indirect effects on virus and purple dotted lines possible effects (not proved)