PMC:7736111 / 139110-139819
Annnotations
LitCovid-PD-HP
{"project":"LitCovid-PD-HP","denotations":[{"id":"T63","span":{"begin":45,"end":60},"obj":"Phenotype"}],"attributes":[{"id":"A63","pred":"hp_id","subj":"T63","obj":"http://purl.obolibrary.org/obo/HP_0001888"}],"text":"34. Total: 41 Mild: 29 Severe: 12 • Slight lymphocytopenia was observed in mild patients and significantly higher in severe COVID-19 patients as revealed by decrease in CD4+, CD8+ and NK cell number.• Peripheral blood showed increased activation status of CD8+ T with higher percentage of CD38+CD8+, CD38+HLA-DR, and CD38+HLA-DR+CD8+ cells in severe than mild cases. While no significant changes were seen in CD4+• Increased expression of exhaustion markers PD-1 and TIM-3 was observed in CD8+, and PD-1 in CD4+ T cells in case of severe cases than mild.• Increased levels of IL-6, TNF-α, IL-17A, IFN-γ, MCP-1, IL-10, IL-4, and IL-5 were observed in COVID-19 patients. Peripheral blood (Song et al., 2020)"}
LitCovid-PubTator
{"project":"LitCovid-PubTator","denotations":[{"id":"3566","span":{"begin":171,"end":174},"obj":"Gene"},{"id":"3567","span":{"begin":177,"end":180},"obj":"Gene"},{"id":"3568","span":{"begin":258,"end":261},"obj":"Gene"},{"id":"3569","span":{"begin":296,"end":299},"obj":"Gene"},{"id":"3570","span":{"begin":331,"end":334},"obj":"Gene"},{"id":"3571","span":{"begin":411,"end":414},"obj":"Gene"},{"id":"3572","span":{"begin":491,"end":494},"obj":"Gene"},{"id":"3573","span":{"begin":578,"end":582},"obj":"Gene"},{"id":"3574","span":{"begin":584,"end":589},"obj":"Gene"},{"id":"3575","span":{"begin":591,"end":597},"obj":"Gene"},{"id":"3576","span":{"begin":599,"end":604},"obj":"Gene"},{"id":"3577","span":{"begin":606,"end":611},"obj":"Gene"},{"id":"3578","span":{"begin":613,"end":618},"obj":"Gene"},{"id":"3579","span":{"begin":620,"end":624},"obj":"Gene"},{"id":"3580","span":{"begin":630,"end":634},"obj":"Gene"},{"id":"3683","span":{"begin":82,"end":90},"obj":"Species"},{"id":"3684","span":{"begin":135,"end":143},"obj":"Species"},{"id":"3685","span":{"begin":661,"end":669},"obj":"Species"},{"id":"3707","span":{"begin":509,"end":512},"obj":"Gene"},{"id":"3759","span":{"begin":45,"end":60},"obj":"Disease"},{"id":"3760","span":{"begin":126,"end":134},"obj":"Disease"},{"id":"3761","span":{"begin":652,"end":660},"obj":"Disease"}],"attributes":[{"id":"A3566","pred":"tao:has_database_id","subj":"3566","obj":"Gene:920"},{"id":"A3567","pred":"tao:has_database_id","subj":"3567","obj":"Gene:925"},{"id":"A3568","pred":"tao:has_database_id","subj":"3568","obj":"Gene:925"},{"id":"A3569","pred":"tao:has_database_id","subj":"3569","obj":"Gene:925"},{"id":"A3570","pred":"tao:has_database_id","subj":"3570","obj":"Gene:925"},{"id":"A3571","pred":"tao:has_database_id","subj":"3571","obj":"Gene:404704"},{"id":"A3572","pred":"tao:has_database_id","subj":"3572","obj":"Gene:925"},{"id":"A3573","pred":"tao:has_database_id","subj":"3573","obj":"Gene:3569"},{"id":"A3574","pred":"tao:has_database_id","subj":"3574","obj":"Gene:7124"},{"id":"A3575","pred":"tao:has_database_id","subj":"3575","obj":"Gene:3605"},{"id":"A3576","pred":"tao:has_database_id","subj":"3576","obj":"Gene:3458"},{"id":"A3577","pred":"tao:has_database_id","subj":"3577","obj":"Gene:6347"},{"id":"A3578","pred":"tao:has_database_id","subj":"3578","obj":"Gene:3586"},{"id":"A3579","pred":"tao:has_database_id","subj":"3579","obj":"Gene:3565"},{"id":"A3580","pred":"tao:has_database_id","subj":"3580","obj":"Gene:3567"},{"id":"A3683","pred":"tao:has_database_id","subj":"3683","obj":"Tax:9606"},{"id":"A3684","pred":"tao:has_database_id","subj":"3684","obj":"Tax:9606"},{"id":"A3685","pred":"tao:has_database_id","subj":"3685","obj":"Tax:9606"},{"id":"A3707","pred":"tao:has_database_id","subj":"3707","obj":"Gene:920"},{"id":"A3759","pred":"tao:has_database_id","subj":"3759","obj":"MESH:D008231"},{"id":"A3760","pred":"tao:has_database_id","subj":"3760","obj":"MESH:C000657245"},{"id":"A3761","pred":"tao:has_database_id","subj":"3761","obj":"MESH:C000657245"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"34. Total: 41 Mild: 29 Severe: 12 • Slight lymphocytopenia was observed in mild patients and significantly higher in severe COVID-19 patients as revealed by decrease in CD4+, CD8+ and NK cell number.• Peripheral blood showed increased activation status of CD8+ T with higher percentage of CD38+CD8+, CD38+HLA-DR, and CD38+HLA-DR+CD8+ cells in severe than mild cases. While no significant changes were seen in CD4+• Increased expression of exhaustion markers PD-1 and TIM-3 was observed in CD8+, and PD-1 in CD4+ T cells in case of severe cases than mild.• Increased levels of IL-6, TNF-α, IL-17A, IFN-γ, MCP-1, IL-10, IL-4, and IL-5 were observed in COVID-19 patients. Peripheral blood (Song et al., 2020)"}
LitCovid-sentences
{"project":"LitCovid-sentences","denotations":[{"id":"T944","span":{"begin":0,"end":3},"obj":"Sentence"},{"id":"T945","span":{"begin":5,"end":11},"obj":"Sentence"},{"id":"T946","span":{"begin":12,"end":20},"obj":"Sentence"},{"id":"T947","span":{"begin":21,"end":31},"obj":"Sentence"},{"id":"T948","span":{"begin":32,"end":368},"obj":"Sentence"},{"id":"T949","span":{"begin":369,"end":670},"obj":"Sentence"},{"id":"T950","span":{"begin":672,"end":709},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"34. Total: 41 Mild: 29 Severe: 12 • Slight lymphocytopenia was observed in mild patients and significantly higher in severe COVID-19 patients as revealed by decrease in CD4+, CD8+ and NK cell number.• Peripheral blood showed increased activation status of CD8+ T with higher percentage of CD38+CD8+, CD38+HLA-DR, and CD38+HLA-DR+CD8+ cells in severe than mild cases. While no significant changes were seen in CD4+• Increased expression of exhaustion markers PD-1 and TIM-3 was observed in CD8+, and PD-1 in CD4+ T cells in case of severe cases than mild.• Increased levels of IL-6, TNF-α, IL-17A, IFN-γ, MCP-1, IL-10, IL-4, and IL-5 were observed in COVID-19 patients. Peripheral blood (Song et al., 2020)"}