PMC:7640975 / 39080-40063
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T337 | 70-78 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T338 | 101-106 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T339 | 186-194 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T340 | 200-208 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T341 | 471-479 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T342 | 522-530 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T343 | 632-640 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T54 | 118-127 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T55 | 327-329 | Disease | denotes | MF | http://purl.obolibrary.org/obo/MONDO_0009691|http://purl.obolibrary.org/obo/MONDO_0020481 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T459 | 101-106 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T460 | 130-131 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T461 | 278-296 | http://purl.obolibrary.org/obo/GO_0005575 | denotes | cellular component |
| T462 | 298-300 | http://purl.obolibrary.org/obo/GO_0005575 | denotes | CC |
| T463 | 568-569 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
| T464 | 737-738 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T465 | 966-970 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | test |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T358 | 70-78 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T359 | 186-194 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T360 | 200-208 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T361 | 273-275 | Chemical | denotes | BP | http://purl.obolibrary.org/obo/CHEBI_29865 |
| T362 | 298-300 | Chemical | denotes | CC | http://purl.obolibrary.org/obo/CHEBI_28940 |
| T363 | 327-329 | Chemical | denotes | MF | http://purl.obolibrary.org/obo/CHEBI_74708 |
| T364 | 471-479 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T365 | 522-530 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T366 | 632-640 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T257 | 0-195 | Sentence | denotes | Figure 3 GO functional annotation of the 78 differentially expressed proteins identified in IPEC-J2 cells upon PDCoV infection. (A) GO annotations for the upregulated and downregulated proteins. |
| T258 | 196-331 | Sentence | denotes | The proteins were annotated into three major categories: biological process (BP), cellular component (CC), and molecular function (MF). |
| T259 | 332-400 | Sentence | denotes | The abscissa text indicates the name and classification of GO terms. |
| T260 | 401-641 | Sentence | denotes | The pink and blue columns represent the upregulated and downregulated proteins, respectively, with the number of altered proteins being marked on top of each column. (B) GO enrichment analysis for the upregulated and downregulated proteins. |
| T261 | 642-716 | Sentence | denotes | The name and classification of each GO term are indicated in the abscissa. |
| T262 | 717-808 | Sentence | denotes | Each column denotes a GO term, and the height of the column represents the enrichment rate. |
| T263 | 809-983 | Sentence | denotes | The color implies the significance of the enrichment (p-value), and the darker the color, the more significant the enrichment of the GO term (Fisher’s exact test; *p < 0.05). |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 696 | 118-127 | Disease | denotes | infection | MESH:D007239 |
| 697 | 93-100 | CellLine | denotes | IPEC-J2 | CVCL:2246 |