PMC:7640975 / 14584-15146 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T101","span":{"begin":337,"end":345},"obj":"Body_part"},{"id":"T102","span":{"begin":443,"end":450},"obj":"Body_part"}],"attributes":[{"id":"A101","pred":"fma_id","subj":"T101","obj":"http://purl.org/sig/ont/fma/fma82751"},{"id":"A102","pred":"fma_id","subj":"T102","obj":"http://purl.org/sig/ont/fma/fma67257"}],"text":"scrofa (Pig)-26103s-20170226.fasta) and porcine deltacoronavirus Uniprot database (February 26, 2017, containing 442 sequences, http://www.uniprot.org/porcinedeltacoronavirus, version: Uniprot-Porcine deltacoronavirus [1586324]-442s-20170226.fasta). The parameters for database searching were set as follows: instrument, TripleTOF 5600; cysteine alkylation, iodoacetamide; digestion, trypsin; dynamic modification, oxidation (M), acetylation (protein N-terminus), and iTRAQ8plex (Y); static modification, iTRAQ8plex (K), iTRAQ8plex (N-terminus), and carbamidomet"}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T212","span":{"begin":309,"end":319},"obj":"http://purl.obolibrary.org/obo/OBI_0000968"}],"text":"scrofa (Pig)-26103s-20170226.fasta) and porcine deltacoronavirus Uniprot database (February 26, 2017, containing 442 sequences, http://www.uniprot.org/porcinedeltacoronavirus, version: Uniprot-Porcine deltacoronavirus [1586324]-442s-20170226.fasta). The parameters for database searching were set as follows: instrument, TripleTOF 5600; cysteine alkylation, iodoacetamide; digestion, trypsin; dynamic modification, oxidation (M), acetylation (protein N-terminus), and iTRAQ8plex (Y); static modification, iTRAQ8plex (K), iTRAQ8plex (N-terminus), and carbamidomet"}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T118","span":{"begin":337,"end":345},"obj":"Chemical"},{"id":"T119","span":{"begin":443,"end":450},"obj":"Chemical"}],"attributes":[{"id":"A118","pred":"chebi_id","subj":"T118","obj":"http://purl.obolibrary.org/obo/CHEBI_15356"},{"id":"A119","pred":"chebi_id","subj":"T119","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"}],"text":"scrofa (Pig)-26103s-20170226.fasta) and porcine deltacoronavirus Uniprot database (February 26, 2017, containing 442 sequences, http://www.uniprot.org/porcinedeltacoronavirus, version: Uniprot-Porcine deltacoronavirus [1586324]-442s-20170226.fasta). The parameters for database searching were set as follows: instrument, TripleTOF 5600; cysteine alkylation, iodoacetamide; digestion, trypsin; dynamic modification, oxidation (M), acetylation (protein N-terminus), and iTRAQ8plex (Y); static modification, iTRAQ8plex (K), iTRAQ8plex (N-terminus), and carbamidomet"}

{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T31","span":{"begin":373,"end":382},"obj":"http://purl.obolibrary.org/obo/GO_0007586"}],"text":"scrofa (Pig)-26103s-20170226.fasta) and porcine deltacoronavirus Uniprot database (February 26, 2017, containing 442 sequences, http://www.uniprot.org/porcinedeltacoronavirus, version: Uniprot-Porcine deltacoronavirus [1586324]-442s-20170226.fasta). The parameters for database searching were set as follows: instrument, TripleTOF 5600; cysteine alkylation, iodoacetamide; digestion, trypsin; dynamic modification, oxidation (M), acetylation (protein N-terminus), and iTRAQ8plex (Y); static modification, iTRAQ8plex (K), iTRAQ8plex (N-terminus), and carbamidomet"}

{"project":"LitCovid-sentences","denotations":[{"id":"T81","span":{"begin":185,"end":249},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"scrofa (Pig)-26103s-20170226.fasta) and porcine deltacoronavirus Uniprot database (February 26, 2017, containing 442 sequences, http://www.uniprot.org/porcinedeltacoronavirus, version: Uniprot-Porcine deltacoronavirus [1586324]-442s-20170226.fasta). The parameters for database searching were set as follows: instrument, TripleTOF 5600; cysteine alkylation, iodoacetamide; digestion, trypsin; dynamic modification, oxidation (M), acetylation (protein N-terminus), and iTRAQ8plex (Y); static modification, iTRAQ8plex (K), iTRAQ8plex (N-terminus), and carbamidomet"}

{"project":"LitCovid-PubTator","denotations":[{"id":"264","span":{"begin":8,"end":11},"obj":"Species"},{"id":"265","span":{"begin":40,"end":64},"obj":"Species"},{"id":"266","span":{"begin":193,"end":217},"obj":"Species"}],"attributes":[{"id":"A264","pred":"tao:has_database_id","subj":"264","obj":"Tax:9823"},{"id":"A265","pred":"tao:has_database_id","subj":"265","obj":"Tax:1586324"},{"id":"A266","pred":"tao:has_database_id","subj":"266","obj":"Tax:1586324"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"scrofa (Pig)-26103s-20170226.fasta) and porcine deltacoronavirus Uniprot database (February 26, 2017, containing 442 sequences, http://www.uniprot.org/porcinedeltacoronavirus, version: Uniprot-Porcine deltacoronavirus [1586324]-442s-20170226.fasta). The parameters for database searching were set as follows: instrument, TripleTOF 5600; cysteine alkylation, iodoacetamide; digestion, trypsin; dynamic modification, oxidation (M), acetylation (protein N-terminus), and iTRAQ8plex (Y); static modification, iTRAQ8plex (K), iTRAQ8plex (N-terminus), and carbamidomet"}