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PMC:7605337 / 2443-3063 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T7 56-59 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T8 106-112 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T11 128-137 Disease denotes nCOV-2019 http://purl.obolibrary.org/obo/MONDO_0100096
T12 255-288 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T13 302-306 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T14 321-325 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T15 380-384 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T20 18-19 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T21 60-67 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T22 113-116 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T23 317-320 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T12 153-157 Chemical denotes beta http://purl.obolibrary.org/obo/CHEBI_10545

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T16 0-68 Sentence denotes Coronaviruses are a family of single-stranded enveloped RNA viruses.
T17 69-620 Sentence denotes Phylogenetic analysis of coronavirus genome has shown that nCOV-2019 belongs to the beta-coronavirus family, which also includes Middle East respiratory syndrome coronavirus (MERS-COV), severe acute respiratory syndrome coronavirus (SARS-COV), and bat-SARS-related coronaviruses.3,4 It is worth mentioning that SARS-COV, which was widespread in 2002 caused more than 8000 cases and about 800 deaths and MERS-COV in 2012 also spread in more than 25 countries, causing about 2500 cases and more than 850 deaths. (www.who.int/health-topics/coronavirus).5

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
64 0-13 Species denotes Coronaviruses Tax:11118
65 94-105 Species denotes coronavirus Tax:11118
66 128-132 Species denotes nCOV Tax:2697049
67 153-169 Species denotes beta-coronavirus Tax:694002
68 198-253 Species denotes Middle East respiratory syndrome coronavirus (MERS-COV) Tax:1335626
69 255-300 Species denotes severe acute respiratory syndrome coronavirus Tax:694009
70 302-310 Species denotes SARS-COV Tax:694009
71 321-347 Species denotes SARS-related coronaviruses Tax:694009
72 380-388 Species denotes SARS-COV Tax:694009
73 472-480 Species denotes MERS-COV Tax:1335626
74 461-467 Disease denotes deaths MESH:D003643
75 571-577 Disease denotes deaths MESH:D003643