PMC:7605337 / 20813-21677
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T49 | 731-739 | Body_part | denotes | backbone | http://purl.org/sig/ont/fma/fma13478 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T126 | 23-32 | Disease | denotes | nCOV-2019 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T127 | 67-76 | Disease | denotes | nCOV-2019 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T131 | 232-233 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T132 | 330-331 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | Å |
| T133 | 346-347 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | Å |
| T134 | 426-427 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T135 | 449-450 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | Å |
| T136 | 538-539 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T137 | 561-562 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | Å |
| T138 | 605-606 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T139 | 627-628 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | Å |
| T140 | 702-705 | http://purl.obolibrary.org/obo/CLO_0001236 | denotes | 2 Å |
| T141 | 861-863 | http://purl.obolibrary.org/obo/CLO_0050050 | denotes | S1 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7 | 54-63 | http://purl.obolibrary.org/obo/GO_0007610 | denotes | behaviors |
| T8 | 524-532 | http://purl.obolibrary.org/obo/GO_0007610 | denotes | behavior |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T110 | 0-80 | Sentence | denotes | The RMSD plots for the nCOV-2019 mutants show similar behaviors to nCOV-2019-wt. |
| T111 | 81-222 | Sentence | denotes | In most of the variants, the RMSD is very stable during the 300 ns simulation which shows the great tolerance of the interface for mutations. |
| T112 | 223-274 | Sentence | denotes | However, a few mutations showed some RMSD variance. |
| T113 | 275-362 | Sentence | denotes | In mutation Y489A, the RMSD increases from 1.37 ± 0.21 Å to1.88 ± 0.16 Å after 2000 ns. |
| T114 | 363-475 | Sentence | denotes | Mutation Y505A resulted in an increase in RMSD up to 100 ns to a value to 1.98 ± 0.20 Å and decreased afterward. |
| T115 | 476-563 | Sentence | denotes | The RMSD for mutation N487A shows an increasing behavior with a value of 2.10 ± 0.23 Å. |
| T116 | 564-629 | Sentence | denotes | Mutations N439K, V483A, and V483F showed a stable RMSD of ∼1.5 Å. |
| T117 | 630-706 | Sentence | denotes | For mutations T478I, G476S, S494P, and A475V, the RMSD increases up to ∼2 Å. |
| T118 | 707-809 | Sentence | denotes | These variations in the backbone RMSD show the involvement of these residues in the complex stability. |
| T119 | 810-864 | Sentence | denotes | RMSD plots for other mutations are shown in Figure S1. |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 466 | 23-27 | Species | denotes | nCOV | Tax:2697049 |
| 467 | 67-71 | Species | denotes | nCOV | Tax:2697049 |