PMC:7605337 / 16471-16877 JSONTXT

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T107","span":{"begin":74,"end":78},"obj":"Disease"},{"id":"T108","span":{"begin":84,"end":93},"obj":"Disease"}],"attributes":[{"id":"A107","pred":"mondo_id","subj":"T107","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A108","pred":"mondo_id","subj":"T108","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"}],"text":"The last 400 ns of simulation was used to explore the dominant motions in SARS-COV, nCOV-2019 and the mutations with extended simulation, and last 200 ns for all other mutants using principal component analysis (PCA) as part of the quasiharmonic analysis method.44 For this method the rotational and translational motions of RBD of all systems were eliminated by fitting to a reference (crystal) structure."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T110","span":{"begin":374,"end":375},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"text":"The last 400 ns of simulation was used to explore the dominant motions in SARS-COV, nCOV-2019 and the mutations with extended simulation, and last 200 ns for all other mutants using principal component analysis (PCA) as part of the quasiharmonic analysis method.44 For this method the rotational and translational motions of RBD of all systems were eliminated by fitting to a reference (crystal) structure."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T65","span":{"begin":212,"end":215},"obj":"Chemical"}],"attributes":[{"id":"A65","pred":"chebi_id","subj":"T65","obj":"http://purl.obolibrary.org/obo/CHEBI_36751"},{"id":"A66","pred":"chebi_id","subj":"T65","obj":"http://purl.obolibrary.org/obo/CHEBI_62248"}],"text":"The last 400 ns of simulation was used to explore the dominant motions in SARS-COV, nCOV-2019 and the mutations with extended simulation, and last 200 ns for all other mutants using principal component analysis (PCA) as part of the quasiharmonic analysis method.44 For this method the rotational and translational motions of RBD of all systems were eliminated by fitting to a reference (crystal) structure."}

{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T5","span":{"begin":300,"end":313},"obj":"http://purl.obolibrary.org/obo/GO_0006412"}],"text":"The last 400 ns of simulation was used to explore the dominant motions in SARS-COV, nCOV-2019 and the mutations with extended simulation, and last 200 ns for all other mutants using principal component analysis (PCA) as part of the quasiharmonic analysis method.44 For this method the rotational and translational motions of RBD of all systems were eliminated by fitting to a reference (crystal) structure."}

{"project":"LitCovid-sentences","denotations":[{"id":"T85","span":{"begin":0,"end":406},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"The last 400 ns of simulation was used to explore the dominant motions in SARS-COV, nCOV-2019 and the mutations with extended simulation, and last 200 ns for all other mutants using principal component analysis (PCA) as part of the quasiharmonic analysis method.44 For this method the rotational and translational motions of RBD of all systems were eliminated by fitting to a reference (crystal) structure."}

{"project":"LitCovid-PubTator","denotations":[{"id":"420","span":{"begin":74,"end":82},"obj":"Species"},{"id":"421","span":{"begin":84,"end":88},"obj":"Species"}],"attributes":[{"id":"A420","pred":"tao:has_database_id","subj":"420","obj":"Tax:694009"},{"id":"A421","pred":"tao:has_database_id","subj":"421","obj":"Tax:2697049"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"The last 400 ns of simulation was used to explore the dominant motions in SARS-COV, nCOV-2019 and the mutations with extended simulation, and last 200 ns for all other mutants using principal component analysis (PCA) as part of the quasiharmonic analysis method.44 For this method the rotational and translational motions of RBD of all systems were eliminated by fitting to a reference (crystal) structure."}