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PMC:7594251 / 93139-94296 JSONTXT

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LitCovid_Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T6 1005-1012 https://glytoucan.org/Structures/Glycans/G15021LG denotes glucose
T7 1067-1074 https://glytoucan.org/Structures/Glycans/G15021LG denotes glucose

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T190 36-39 Body_part denotes map http://purl.org/sig/ont/fma/fma67847
T191 203-210 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T192 710-717 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T193 748-756 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T194 970-975 Body_part denotes heart http://purl.org/sig/ont/fma/fma7088
T195 1005-1012 Body_part denotes glucose http://purl.org/sig/ont/fma/fma82743
T196 1067-1074 Body_part denotes glucose http://purl.org/sig/ont/fma/fma82743

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T34 970-975 Body_part denotes heart http://purl.obolibrary.org/obo/UBERON_0000948

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T654 0-1 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T655 201-202 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T656 338-339 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T657 367-373 http://purl.obolibrary.org/obo/SO_0000418 denotes signal
T658 705-706 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T659 879-881 http://purl.obolibrary.org/obo/CLO_0007874 denotes ms
T660 970-975 http://purl.obolibrary.org/obo/UBERON_0000948 denotes heart
T661 970-975 http://purl.obolibrary.org/obo/UBERON_0007100 denotes heart
T662 970-975 http://purl.obolibrary.org/obo/UBERON_0015228 denotes heart
T663 970-975 http://www.ebi.ac.uk/efo/EFO_0000815 denotes heart
T664 1122-1125 http://purl.obolibrary.org/obo/CLO_0051582 denotes has

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T546 71-77 Chemical denotes ligand http://purl.obolibrary.org/obo/CHEBI_52214
T547 152-159 Chemical denotes ligands http://purl.obolibrary.org/obo/CHEBI_52214
T548 203-210 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T549 240-247 Chemical denotes ligands http://purl.obolibrary.org/obo/CHEBI_52214
T550 349-355 Chemical denotes ligand http://purl.obolibrary.org/obo/CHEBI_52214
T551 356-362 Chemical denotes ligand http://purl.obolibrary.org/obo/CHEBI_52214
T552 395-402 Chemical denotes ligands http://purl.obolibrary.org/obo/CHEBI_52214
T553 449-456 Chemical denotes ligands http://purl.obolibrary.org/obo/CHEBI_52214
T554 578-584 Chemical denotes ligand http://purl.obolibrary.org/obo/CHEBI_52214
T555 710-717 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T556 748-756 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T557 928-937 Chemical denotes glycolate http://purl.obolibrary.org/obo/CHEBI_29805
T558 938-941 Chemical denotes NAD http://purl.obolibrary.org/obo/CHEBI_13389|http://purl.obolibrary.org/obo/CHEBI_15846
T560 1005-1012 Chemical denotes glucose http://purl.obolibrary.org/obo/CHEBI_17234|http://purl.obolibrary.org/obo/CHEBI_4167
T562 1015-1024 Chemical denotes phosphate http://purl.obolibrary.org/obo/CHEBI_18367|http://purl.obolibrary.org/obo/CHEBI_26020|http://purl.obolibrary.org/obo/CHEBI_35780|http://purl.obolibrary.org/obo/CHEBI_43474
T566 1025-1030 Chemical denotes NADPH http://purl.obolibrary.org/obo/CHEBI_16474|http://purl.obolibrary.org/obo/CHEBI_57783
T17092 1067-1074 Chemical denotes glucose http://purl.obolibrary.org/obo/CHEBI_17234|http://purl.obolibrary.org/obo/CHEBI_4167

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
963 705-709 Gene denotes a 3D Gene:140564
964 1050-1066 Species denotes L. mesenteroides Tax:1245
965 928-937 Chemical denotes glycolate MESH:C031149
966 938-942 Chemical denotes NAD+ MESH:D009243
967 1005-1012 Chemical denotes glucose MESH:D005947
968 1025-1030 Chemical denotes NADPH MESH:D009249
969 1067-1074 Chemical denotes glucose MESH:D005947

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T605 0-111 Sentence denotes A second method that can be used to map pharmacophores is called inter-ligand nuclear Overhauser effect (ILOE).
T606 112-337 Sentence denotes This 2D NMR experiment detects when two ligands bind simultaneously to adjacent sites on a protein surface although both of the ligands do not have to bind to the same binding pocket (opposite to INPHARMA, see above) [5,393].
T607 338-538 Sentence denotes A negative ligand−ligand NOE signal will be created when ligands bind in close proximity to each other whereas ligands that do not bind will show no NOEs, or at most very weak positive ones [372,394].
T608 539-632 Sentence denotes ILOE also enables determination of the ligand orientations with respect to one another [393].
T609 633-757 Sentence denotes As in the case of INPHARMA, ILOE can be utilized even in the absence of a 3D protein structure and used with large proteins.
T610 758-888 Sentence denotes Additionally, ILOE differs from INPHARMA in mixing times—for ILOE the mixing times are typically in the range of 600–800 ms [345].
T611 889-1157 Sentence denotes Application of ILOE was first shown on glycolate+NAD+ in the presence of porcine heart lactatedehydrogenase, and by glucose-6-phosphate+NADPH in the presence of L. mesenteroides glucose-6-phosphatedehydrogenase and from that time it has been widely used [393,395,396].