PMC:7589163 / 8404-9437
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T50 | 73-82 | Body_part | denotes | epithelia | http://purl.org/sig/ont/fma/fma9639 |
| T51 | 118-127 | Body_part | denotes | epithelia | http://purl.org/sig/ont/fma/fma9639 |
| T52 | 128-134 | Body_part | denotes | tissue | http://purl.org/sig/ont/fma/fma9637 |
| T53 | 304-309 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T54 | 311-322 | Body_part | denotes | macrophages | http://purl.org/sig/ont/fma/fma63261 |
| T55 | 328-339 | Body_part | denotes | neutrophils | http://purl.org/sig/ont/fma/fma62860 |
| T56 | 535-543 | Body_part | denotes | NK cells | http://purl.org/sig/ont/fma/fma63147 |
| T57 | 538-543 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T58 | 591-606 | Body_part | denotes | dendritic cells | http://purl.org/sig/ont/fma/fma273565 |
| T59 | 601-606 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T60 | 669-678 | Body_part | denotes | cytokines | http://purl.org/sig/ont/fma/fma84050 |
| T61 | 679-684 | Body_part | denotes | IL-12 | http://purl.org/sig/ont/fma/fma86579 |
| T62 | 698-713 | Body_part | denotes | dendritic cells | http://purl.org/sig/ont/fma/fma273565 |
| T63 | 708-713 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T64 | 953-964 | Body_part | denotes | macrophages | http://purl.org/sig/ont/fma/fma63261 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T21 | 73-82 | Body_part | denotes | epithelia | http://purl.obolibrary.org/obo/UBERON_0000483 |
| T22 | 118-127 | Body_part | denotes | epithelia | http://purl.obolibrary.org/obo/UBERON_0000483 |
| T23 | 128-134 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T35 | 172-182 | Disease | denotes | infections | http://purl.obolibrary.org/obo/MONDO_0005550 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T81 | 28-29 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T82 | 223-224 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T83 | 299-309 | http://purl.obolibrary.org/obo/CL_0000623 | denotes | (NK) cells |
| T84 | 471-472 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T85 | 479-480 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T86 | 535-543 | http://purl.obolibrary.org/obo/CL_0000623 | denotes | NK cells |
| T87 | 591-606 | http://purl.obolibrary.org/obo/CL_0000451 | denotes | dendritic cells |
| T88 | 698-713 | http://purl.obolibrary.org/obo/CL_0000451 | denotes | dendritic cells |
| T89 | 718-721 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T90 | 727-728 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T91 | 755-760 | http://purl.obolibrary.org/obo/PR_000001350 | denotes | Foxp3 |
| T92 | 762-766 | http://purl.obolibrary.org/obo/CL_0000792 | denotes | Treg |
| T93 | 833-834 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T94 | 908-909 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T95 | 974-975 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T96 | 988-998 | http://purl.obolibrary.org/obo/CL_0000234 | denotes | phagocytic |
| T97 | 1019-1027 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activity |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T96 | 20-29 | Chemical | denotes | vitamin A | http://purl.obolibrary.org/obo/CHEBI_12777 |
| T97 | 20-27 | Chemical | denotes | vitamin | http://purl.obolibrary.org/obo/CHEBI_33229 |
| T98 | 215-224 | Chemical | denotes | Vitamin A | http://purl.obolibrary.org/obo/CHEBI_17336 |
| T99 | 215-222 | Chemical | denotes | Vitamin | http://purl.obolibrary.org/obo/CHEBI_33229 |
| T100 | 391-401 | Chemical | denotes | interferon | http://purl.obolibrary.org/obo/CHEBI_52999 |
| T101 | 403-406 | Chemical | denotes | IFN | http://purl.obolibrary.org/obo/CHEBI_52999 |
| T102 | 456-458 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
| T104 | 463-472 | Chemical | denotes | vitamin A | http://purl.obolibrary.org/obo/CHEBI_12777 |
| T105 | 463-470 | Chemical | denotes | vitamin | http://purl.obolibrary.org/obo/CHEBI_33229 |
| T106 | 679-681 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
| T108 | 689-691 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
| T110 | 900-909 | Chemical | denotes | vitamin A | http://purl.obolibrary.org/obo/CHEBI_12777 |
| T111 | 900-907 | Chemical | denotes | vitamin | http://purl.obolibrary.org/obo/CHEBI_33229 |
| T112 | 929-942 | Chemical | denotes | antimicrobial | http://purl.obolibrary.org/obo/CHEBI_33281 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T27 | 414-440 | http://purl.obolibrary.org/obo/GO_0051047 | denotes | upregulating the secretion |
| T28 | 431-440 | http://purl.obolibrary.org/obo/GO_0046903 | denotes | secretion |
| T29 | 635-644 | http://purl.obolibrary.org/obo/GO_0046903 | denotes | secretion |
| T30 | 839-854 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcriptional |
| T31 | 1003-1018 | http://purl.obolibrary.org/obo/GO_0045730 | denotes | oxidative burst |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T7 | 165-182 | Phenotype | denotes | severe infections | http://purl.obolibrary.org/obo/HP_0032169 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T62 | 0-214 | Sentence | denotes | Regarding immunity, vitamin A contributes to supporting the integrity of epithelia, particularly the gastrointestinal epithelia tissue among children suffering from severe infections or who are undernourished [15]. |
| T63 | 215-348 | Sentence | denotes | Vitamin A is also important in regulating the number and function of natural killer (NK) cells, macrophages, and neutrophils [16,17]. |
| T64 | 349-544 | Sentence | denotes | By downregulating the expression level of interferon (IFN)-γ and upregulating the secretion of inerleukin (IL)-5, vitamin A plays a regulatory role in the early differentiation stage of NK cells. |
| T65 | 545-714 | Sentence | denotes | Moreover, it regulates the differentiation of dendritic cells precursors and promotes the secretion of the pro-inflammatory cytokines IL-12 and IL-23 by dendritic cells. |
| T66 | 715-886 | Sentence | denotes | It has also a crucial role in promoting Foxp3+ Treg generation, while reciprocally inhibiting Th1/Th17 generation and a Th9 transcriptional and epigenomic program [20,21]. |
| T67 | 887-1033 | Sentence | denotes | Furthermore, vitamin A is involved in the antimicrobial action of macrophages, playing a role in the phagocytic and oxidative burst activity [13]. |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 153 | 391-409 | Gene | denotes | interferon (IFN)-γ | Gene:3458 |
| 154 | 444-461 | Gene | denotes | inerleukin (IL)-5 | Gene:3567 |
| 155 | 689-694 | Gene | denotes | IL-23 | Gene:51561 |
| 156 | 755-760 | Gene | denotes | Foxp3 | Gene:50943 |
| 157 | 141-149 | Species | denotes | children | Tax:9606 |
| 158 | 20-29 | Chemical | denotes | vitamin A | MESH:D014801 |
| 159 | 215-224 | Chemical | denotes | Vitamin A | MESH:D014801 |
| 160 | 463-472 | Chemical | denotes | vitamin A | MESH:D014801 |
| 161 | 762-766 | Chemical | denotes | Treg | |
| 162 | 900-909 | Chemical | denotes | vitamin A | MESH:D014801 |
| 163 | 172-182 | Disease | denotes | infections | MESH:D007239 |