PMC:7574920 / 1795-2189 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T9","span":{"begin":168,"end":171},"obj":"Body_part"},{"id":"T10","span":{"begin":210,"end":214},"obj":"Body_part"},{"id":"T11","span":{"begin":255,"end":258},"obj":"Body_part"}],"attributes":[{"id":"A9","pred":"fma_id","subj":"T9","obj":"http://purl.org/sig/ont/fma/fma67095"},{"id":"A10","pred":"fma_id","subj":"T10","obj":"http://purl.org/sig/ont/fma/fma74402"},{"id":"A11","pred":"fma_id","subj":"T11","obj":"http://purl.org/sig/ont/fma/fma67095"}],"text":" a constant temperature, thus eliminating the need for sophisticated instrumentation. Here, we tested a two-color RT-LAMP assay protocol for detecting SARS-CoV-2 viral RNA using a primer set specific for the N gene. We tested our RT-LAMP assay on surplus RNA samples isolated from 768 pharyngeal swab specimens collected from individuals being tested for COVID-19. We determined the sensitivity"}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T15","span":{"begin":151,"end":159},"obj":"Disease"},{"id":"T16","span":{"begin":355,"end":363},"obj":"Disease"}],"attributes":[{"id":"A15","pred":"mondo_id","subj":"T15","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A16","pred":"mondo_id","subj":"T16","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"}],"text":" a constant temperature, thus eliminating the need for sophisticated instrumentation. Here, we tested a two-color RT-LAMP assay protocol for detecting SARS-CoV-2 viral RNA using a primer set specific for the N gene. We tested our RT-LAMP assay on surplus RNA samples isolated from 768 pharyngeal swab specimens collected from individuals being tested for COVID-19. We determined the sensitivity"}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T18","span":{"begin":1,"end":2},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T19","span":{"begin":69,"end":84},"obj":"http://purl.obolibrary.org/obo/OBI_0000968"},{"id":"T20","span":{"begin":95,"end":101},"obj":"http://purl.obolibrary.org/obo/UBERON_0000473"},{"id":"T21","span":{"begin":102,"end":103},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T22","span":{"begin":178,"end":179},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T23","span":{"begin":210,"end":214},"obj":"http://purl.obolibrary.org/obo/OGG_0000000002"},{"id":"T24","span":{"begin":219,"end":225},"obj":"http://purl.obolibrary.org/obo/UBERON_0000473"},{"id":"T25","span":{"begin":344,"end":350},"obj":"http://purl.obolibrary.org/obo/UBERON_0000473"}],"text":" a constant temperature, thus eliminating the need for sophisticated instrumentation. Here, we tested a two-color RT-LAMP assay protocol for detecting SARS-CoV-2 viral RNA using a primer set specific for the N gene. We tested our RT-LAMP assay on surplus RNA samples isolated from 768 pharyngeal swab specimens collected from individuals being tested for COVID-19. We determined the sensitivity"}

{"project":"LitCovid-PubTator","denotations":[{"id":"31","span":{"begin":208,"end":209},"obj":"Gene"},{"id":"35","span":{"begin":151,"end":161},"obj":"Species"},{"id":"41","span":{"begin":355,"end":363},"obj":"Disease"}],"attributes":[{"id":"A31","pred":"tao:has_database_id","subj":"31","obj":"Gene:43740575"},{"id":"A35","pred":"tao:has_database_id","subj":"35","obj":"Tax:2697049"},{"id":"A41","pred":"tao:has_database_id","subj":"41","obj":"MESH:C000657245"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":" a constant temperature, thus eliminating the need for sophisticated instrumentation. Here, we tested a two-color RT-LAMP assay protocol for detecting SARS-CoV-2 viral RNA using a primer set specific for the N gene. We tested our RT-LAMP assay on surplus RNA samples isolated from 768 pharyngeal swab specimens collected from individuals being tested for COVID-19. We determined the sensitivity"}

{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T16","span":{"begin":114,"end":116},"obj":"http://purl.obolibrary.org/obo/GO_0001171"},{"id":"T17","span":{"begin":230,"end":232},"obj":"http://purl.obolibrary.org/obo/GO_0001171"}],"text":" a constant temperature, thus eliminating the need for sophisticated instrumentation. Here, we tested a two-color RT-LAMP assay protocol for detecting SARS-CoV-2 viral RNA using a primer set specific for the N gene. We tested our RT-LAMP assay on surplus RNA samples isolated from 768 pharyngeal swab specimens collected from individuals being tested for COVID-19. We determined the sensitivity"}

{"project":"LitCovid-sentences","denotations":[{"id":"T15","span":{"begin":86,"end":215},"obj":"Sentence"},{"id":"T16","span":{"begin":216,"end":364},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":" a constant temperature, thus eliminating the need for sophisticated instrumentation. Here, we tested a two-color RT-LAMP assay protocol for detecting SARS-CoV-2 viral RNA using a primer set specific for the N gene. We tested our RT-LAMP assay on surplus RNA samples isolated from 768 pharyngeal swab specimens collected from individuals being tested for COVID-19. We determined the sensitivity"}