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PMC:7571312 / 556-1040 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T8747 138-145 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T8 262-266 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T12954 70-77 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T9960 156-157 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T99506 179-186 http://purl.obolibrary.org/obo/CLO_0009985 denotes focused
T95582 437-438 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T3 138-145 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T4 235-241 Chemical denotes ketone http://purl.obolibrary.org/obo/CHEBI_17087
T5 248-258 Chemical denotes inhibitors http://purl.obolibrary.org/obo/CHEBI_35222
T6 290-296 Chemical denotes ligand http://purl.obolibrary.org/obo/CHEBI_52214
T7 421-423 Chemical denotes PF http://purl.obolibrary.org/obo/CHEBI_74795|http://purl.obolibrary.org/obo/CHEBI_90284
T9 446-455 Chemical denotes inhibitor http://purl.obolibrary.org/obo/CHEBI_35222

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T5 29-155 Sentence denotes The 3CLpro sequences for CoV-1 and CoV-2 viruses are 100% identical in the catalytic domain that carries out protein cleavage.
T6 156-386 Sentence denotes A research effort that focused on the discovery of reversible and irreversible ketone-based inhibitors of SARS CoV-1 3CLpro employing ligand-protease structures solved by X-ray crystallography led to the identification of 3 and 4.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
22 4-15 Species denotes coronavirus Tax:11118
23 54-57 Species denotes CoV Tax:11118
24 64-69 Species denotes CoV-2 Tax:2697049
25 262-270 Species denotes SARS CoV Tax:694009
26 459-464 Species denotes CoV-2 Tax:2697049
27 235-241 Chemical denotes ketone MESH:D007659