PMC:7571312 / 16750-17191
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T87686 | 6-14 | Body_part | denotes | cysteine | http://purl.org/sig/ont/fma/fma82751 |
| T47943 | 84-87 | Body_part | denotes | C–S | http://purl.org/sig/ont/fma/fma284995 |
| T89780 | 205-213 | Body_part | denotes | backbone | http://purl.org/sig/ont/fma/fma13478 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T34478 | 37-38 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T81268 | 82-83 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | Å |
| T15335 | 246-247 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T62436 | 372-373 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T271 | 6-14 | Chemical | denotes | cysteine | http://purl.obolibrary.org/obo/CHEBI_15356 |
| T272 | 24-30 | Chemical | denotes | sulfur | http://purl.obolibrary.org/obo/CHEBI_26833 |
| T273 | 60-69 | Chemical | denotes | methylene | http://purl.obolibrary.org/obo/CHEBI_29357|http://purl.obolibrary.org/obo/CHEBI_29358|http://purl.obolibrary.org/obo/CHEBI_50728 |
| T276 | 70-76 | Chemical | denotes | carbon | http://purl.obolibrary.org/obo/CHEBI_27594|http://purl.obolibrary.org/obo/CHEBI_33415 |
| T278 | 106-112 | Chemical | denotes | ketone | http://purl.obolibrary.org/obo/CHEBI_17087 |
| T279 | 113-121 | Chemical | denotes | carbonyl | http://purl.obolibrary.org/obo/CHEBI_23019 |
| T280 | 185-193 | Chemical | denotes | hydrogen | http://purl.obolibrary.org/obo/CHEBI_49637 |
| T281 | 214-216 | Chemical | denotes | NH | http://purl.obolibrary.org/obo/CHEBI_29339|http://purl.obolibrary.org/obo/CHEBI_73424 |
| T283 | 281-289 | Chemical | denotes | hydrogen | http://purl.obolibrary.org/obo/CHEBI_49637 |
| T284 | 352-361 | Chemical | denotes | imidazole | http://purl.obolibrary.org/obo/CHEBI_14434|http://purl.obolibrary.org/obo/CHEBI_16069 |
| T286 | 374-382 | Chemical | denotes | hydrogen | http://purl.obolibrary.org/obo/CHEBI_49637 |
| T287 | 388-393 | Chemical | denotes | donor | http://purl.obolibrary.org/obo/CHEBI_17891 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T109 | 102-245 | Sentence | denotes | The ketone carbonyl is positioned within the oxyanion hole and as such engaging in hydrogen bonds with backbone NH groups of Gly143 and Cys145. |
| T110 | 246-426 | Sentence | denotes | A detailed analysis of an extended hydrogen bond network from catalytic His41 reveals that the side-chain imidazole serves as a hydrogen bond donor to the interior of the protease. |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 466 | 6-14 | Chemical | denotes | cysteine | MESH:D003545 |
| 467 | 16-22 | Chemical | denotes | Cys145 | |
| 468 | 24-30 | Chemical | denotes | sulfur | MESH:D013455 |
| 469 | 70-76 | Chemical | denotes | carbon | MESH:D002244 |
| 470 | 106-112 | Chemical | denotes | ketone | MESH:D007659 |
| 471 | 185-193 | Chemical | denotes | hydrogen | MESH:D006859 |
| 472 | 227-233 | Chemical | denotes | Gly143 | |
| 473 | 238-244 | Chemical | denotes | Cys145 | |
| 474 | 281-289 | Chemical | denotes | hydrogen | MESH:D006859 |
| 475 | 318-323 | Chemical | denotes | His41 | |
| 476 | 352-361 | Chemical | denotes | imidazole | MESH:C029899 |
| 477 | 374-382 | Chemical | denotes | hydrogen | MESH:D006859 |