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PMC:7571312 / 13041-13941 JSONTXT

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LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T64601 128-130 http://purl.obolibrary.org/obo/CLO_0008285 denotes P1
T24049 249-251 http://purl.obolibrary.org/obo/CLO_0001302 denotes 34
T15952 276-277 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T58065 297-310 http://purl.obolibrary.org/obo/UBERON_0002329 denotes epimerization
T75772 318-320 http://purl.obolibrary.org/obo/CLO_0008285 denotes P1
T70942 415-417 http://purl.obolibrary.org/obo/CLO_0001313 denotes 36
T27962 451-454 http://purl.obolibrary.org/obo/CLO_0002526 denotes CMK
T47002 475-477 http://purl.obolibrary.org/obo/CLO_0001000 denotes 35
T84592 827-829 http://purl.obolibrary.org/obo/CLO_0008307 denotes P2

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T198 128-130 Chemical denotes P1 http://purl.obolibrary.org/obo/CHEBI_60949
T199 142-148 Chemical denotes oxygen http://purl.obolibrary.org/obo/CHEBI_25805
T200 178-183 Chemical denotes amide http://purl.obolibrary.org/obo/CHEBI_29337|http://purl.obolibrary.org/obo/CHEBI_32988
T202 318-320 Chemical denotes P1 http://purl.obolibrary.org/obo/CHEBI_60949
T203 389-399 Chemical denotes inhibitors http://purl.obolibrary.org/obo/CHEBI_35222
T204 510-514 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T205 612-620 Chemical denotes hydroxyl http://purl.obolibrary.org/obo/CHEBI_29191|http://purl.obolibrary.org/obo/CHEBI_43176
T207 689-695 Chemical denotes silver http://purl.obolibrary.org/obo/CHEBI_30512|http://purl.obolibrary.org/obo/CHEBI_9141
T209 700-705 Chemical denotes oxide http://purl.obolibrary.org/obo/CHEBI_25741|http://purl.obolibrary.org/obo/CHEBI_29356
T211 735-745 Chemical denotes inhibitors http://purl.obolibrary.org/obo/CHEBI_35222
T212 827-829 Chemical denotes P2 http://purl.obolibrary.org/obo/CHEBI_33472
T213 834-839 Chemical denotes amine http://purl.obolibrary.org/obo/CHEBI_32952
T214 877-887 Chemical denotes inhibitors http://purl.obolibrary.org/obo/CHEBI_35222

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T68 0-108 Sentence denotes Hydroxymethylketone (HMK) derivatives were accessed by two complimentary approaches illustrated in Scheme 3.
T69 109-328 Sentence denotes Elaboration of the P1′-protected oxygen intermediate 9 by sequential amide bond coupling reactions provided benzylether derivatives such as 34 in moderate yields with a low propensity for epimerization at the P1 center.
T70 329-418 Sentence denotes Hydrogenolytic debenzylation readily afforded the final HMK inhibitors exemplified by 36.
T71 419-768 Sentence denotes Alternatively, fully elaborated CMK derivatives such as 35 were reacted with benzoylformic acid followed by methanolysis to generate HMK final products such as 36.36 Alkylation of the terminal hydroxyl was achieved under microwave-assisted conditions in the presence of silver (I) oxide to afford alkoxymethylketone inhibitors, as illustrated by 37.
T72 769-900 Sentence denotes Using these two synthetic approaches with substitution of P2 and amine capping structural elements provided inhibitors 4 and 38–50.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
354 0-19 Chemical denotes Hydroxymethylketone
355 21-24 Chemical denotes HMK
356 142-148 Chemical denotes oxygen MESH:D010100
357 178-183 Chemical denotes amide MESH:D000577
358 496-514 Chemical denotes benzoylformic acid MESH:C012482
359 612-620 Chemical denotes hydroxyl MESH:D017665
360 689-705 Chemical denotes silver (I) oxide MESH:C040225
361 716-734 Chemical denotes alkoxymethylketone
362 827-829 Chemical denotes P2 MESH:C020845
363 834-839 Chemical denotes amine MESH:D000588