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PMC:7571312 / 1254-1708 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T26446 106-112 Body_part denotes Genome http://purl.org/sig/ont/fma/fma84116

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T12 40-44 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T13 166-170 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T14 206-239 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T15 241-245 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T16 269-273 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T17 342-346 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T83605 130-135 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T83875 145-146 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T75111 396-405 http://purl.obolibrary.org/obo/GO_0007585 denotes breathing

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T10 0-454 Sentence denotes By February 2020, the novel coronavirus SARS CoV-2 was identified as the causative agent for COVID-19.1,2 Genome analysis of this virus revealed a high similarity to SARS CoV-1, the coronavirus that caused severe acute respiratory syndrome (SARS) in 2002–2003.2−4 Like SARS CoV-1, which resulted in 799 deaths among the 8464 probable cases,5 SARS CoV-2 can induce fever, coughing, and difficulty breathing that rapidly becomes more serious in some cases.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T2 364-369 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T3 371-379 Phenotype denotes coughing http://purl.obolibrary.org/obo/HP_0012735
T4 385-405 Phenotype denotes difficulty breathing http://purl.obolibrary.org/obo/HP_0002098

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
60 22-39 Species denotes novel coronavirus Tax:2697049
61 40-50 Species denotes SARS CoV-2 Tax:2697049
62 166-174 Species denotes SARS CoV Tax:694009
63 182-193 Species denotes coronavirus Tax:11118
64 269-277 Species denotes SARS CoV Tax:694009
65 342-352 Species denotes SARS CoV-2 Tax:2697049
79 93-101 Disease denotes COVID-19 MESH:C000657245
80 213-239 Disease denotes acute respiratory syndrome MESH:D012120
81 303-309 Disease denotes deaths MESH:D003643
82 364-369 Disease denotes fever MESH:D005334
83 371-379 Disease denotes coughing MESH:D003371

2_test

Id Subject Object Predicate Lexical cue
33054210-32015508-61913438 102-103 32015508 denotes 1
33054210-32015507-61913439 104-105 32015507 denotes 2
33054210-32015507-61913440 260-261 32015507 denotes 2
33054210-12730500-61913441 262-263 12730500 denotes 4