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PMC:7565482 / 1747-3140 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T7 888-893 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T8 1091-1095 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T9 1250-1254 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T10 23-31 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T11 193-201 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T12 366-374 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T13 513-520 Disease denotes sterile http://purl.obolibrary.org/obo/MONDO_0005047
T14 649-658 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T15 729-737 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T16 785-794 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T17 1017-1025 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T18 1372-1380 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T19 1383-1392 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T13 119-120 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T14 261-264 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T15 283-284 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T16 886-893 http://purl.obolibrary.org/obo/CL_0000084 denotes T cells
T17 1074-1079 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T18 1089-1095 http://purl.obolibrary.org/obo/CL_0000084 denotes T-cell
T19 1248-1254 http://purl.obolibrary.org/obo/CL_0000084 denotes T cell

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
37 193-203 Species denotes SARS-CoV-2 Tax:2697049
38 366-376 Species denotes SARS-CoV-2 Tax:2697049
39 707-720 Species denotes coronaviruses Tax:11118
40 729-737 Species denotes SARS-CoV Tax:694009
41 919-925 Species denotes people Tax:9606
42 1017-1027 Species denotes SARS-CoV-2 Tax:2697049
43 23-31 Disease denotes COVID-19 MESH:C000657245
44 649-658 Disease denotes infection MESH:D007239
45 744-748 Disease denotes MERS MESH:D018352
46 785-794 Disease denotes infection MESH:D007239
47 1372-1392 Disease denotes SARS-CoV-2 infection MESH:C000657245

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T3 149-164 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response
T4 998-1013 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T12 0-204 Sentence denotes Since the start of the COVID-19 pandemic in December 2019, researchers around the world have put major efforts towards a better understanding of the immune response to its causative agent, the SARS-CoV-2.
T13 205-392 Sentence denotes Although an impressive amount of scientific information has been generated in a very short period of time, there remain significant gaps in our understanding of SARS-CoV-2 immune control.
T14 393-659 Sentence denotes In particular, it remains unclear what kind of adaptive immunity should be triggered by vaccination in order to achieve sterile immunity, or at least lead to an ameliorated disease course, in cases where vaccination cannot provide absolute protection from infection.
T15 660-972 Sentence denotes We know from the available literature on other coronaviruses (mainly SARS-CoV-1 and MERS) that antibodies can neutralize the infection, although these humoral responses are short lived in many individuals, and that long-lived T cells responses are present in people with less severe disease outcomes [1,2,3,4,5].
T16 973-1211 Sentence denotes The emerging data on the immune response to SARS-CoV-2 demonstrate the essential contribution of the virus-specific T-cell responses, possibly in addition to the action of neutralizing antibodies, in viral control [3,6,7,8,9,10,11,12,13].
T17 1212-1393 Sentence denotes Thus, improved tools to assess host T cell immunity in detail are urgently needed to better identify these responses and to define their role in the outcome of SARS-CoV-2 infection.