PMC:7565482 / 15134-15653
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T74 | 0-10 | Body_part | denotes | Amino acid | http://purl.org/sig/ont/fma/fma82739 |
T75 | 163-173 | Body_part | denotes | amino acid | http://purl.org/sig/ont/fma/fma82739 |
T76 | 195-202 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T130 | 139-141 | http://purl.obolibrary.org/obo/CLO_0050050 | denotes | S1 |
T131 | 295-297 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
170 | 188-194 | Gene | denotes | ORF1ab | Gene:43740578 |
171 | 281-286 | Species | denotes | CoV-2 | Tax:2697049 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T100 | 0-183 | Sentence | denotes | Amino acid positional Shannon entropies were generally highly conserved, although specific more variable positions were identified (Figure S1), linked to specific amino acid variants. |
T101 | 184-273 | Sentence | denotes | The ORF1ab protein, including three of the most variable positions, is shown in Figure 1. |
T102 | 274-361 | Sentence | denotes | In the CoV-2-cons 15–11 OLP set, mean OLP normalized entropies were overall low (Range: |
T103 | 362-436 | Sentence | denotes | 0.947–0.758) and comparable between OLP covering the canonical ORF (Range: |
T104 | 437-505 | Sentence | denotes | 0.947–0.879) and OLP matching the alternative frameshift ORF (Range: |
T105 | 506-519 | Sentence | denotes | 0.932–0.758). |