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PMC:7565482 / 15134-15653 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T74 0-10 Body_part denotes Amino acid http://purl.org/sig/ont/fma/fma82739
T75 163-173 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T76 195-202 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T130 139-141 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T131 295-297 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
170 188-194 Gene denotes ORF1ab Gene:43740578
171 281-286 Species denotes CoV-2 Tax:2697049

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T100 0-183 Sentence denotes Amino acid positional Shannon entropies were generally highly conserved, although specific more variable positions were identified (Figure S1), linked to specific amino acid variants.
T101 184-273 Sentence denotes The ORF1ab protein, including three of the most variable positions, is shown in Figure 1.
T102 274-361 Sentence denotes In the CoV-2-cons 15–11 OLP set, mean OLP normalized entropies were overall low (Range:
T103 362-436 Sentence denotes 0.947–0.758) and comparable between OLP covering the canonical ORF (Range:
T104 437-505 Sentence denotes 0.947–0.879) and OLP matching the alternative frameshift ORF (Range:
T105 506-519 Sentence denotes 0.932–0.758).