
PMC:7558333 / 9597-9966
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7558333","sourcedb":"PMC","sourceid":"7558333","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7558333","text":"However, in this particular context of COVID-19 with all ARDS patients presenting compatible clinical signs and abnormal chest CT imaging in all likelihood lacking specificity, we decided to use a modified AspICU algorithm taking into account blood markers; we classified eight patients as colonized and seven patients with a putative/probable IA (Table 1 and Table 2).","tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T25","span":{"begin":121,"end":126},"obj":"Body_part"},{"id":"T26","span":{"begin":243,"end":248},"obj":"Body_part"}],"attributes":[{"id":"A25","pred":"fma_id","subj":"T25","obj":"http://purl.org/sig/ont/fma/fma9576"},{"id":"A26","pred":"fma_id","subj":"T26","obj":"http://purl.org/sig/ont/fma/fma9670"},{"subj":"T25","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T26","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T17","span":{"begin":121,"end":126},"obj":"Body_part"},{"id":"T18","span":{"begin":243,"end":248},"obj":"Body_part"}],"attributes":[{"id":"A17","pred":"uberon_id","subj":"T17","obj":"http://purl.obolibrary.org/obo/UBERON_0001443"},{"id":"A18","pred":"uberon_id","subj":"T18","obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"subj":"T17","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T18","pred":"source","obj":"LitCovid-PD-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T50","span":{"begin":39,"end":47},"obj":"Disease"},{"id":"T51","span":{"begin":57,"end":61},"obj":"Disease"},{"id":"T52","span":{"begin":344,"end":346},"obj":"Disease"}],"attributes":[{"id":"A50","pred":"mondo_id","subj":"T50","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A51","pred":"mondo_id","subj":"T51","obj":"http://purl.obolibrary.org/obo/MONDO_0006502"},{"id":"A52","pred":"mondo_id","subj":"T52","obj":"http://purl.obolibrary.org/obo/MONDO_0000240"},{"subj":"T50","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T51","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T52","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T60","span":{"begin":121,"end":126},"obj":"http://www.ebi.ac.uk/efo/EFO_0000965"},{"id":"T61","span":{"begin":195,"end":196},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T62","span":{"begin":243,"end":248},"obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"id":"T63","span":{"begin":243,"end":248},"obj":"http://www.ebi.ac.uk/efo/EFO_0000296"},{"id":"T64","span":{"begin":290,"end":299},"obj":"http://purl.obolibrary.org/obo/UBERON_0001155"},{"id":"T65","span":{"begin":324,"end":325},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"attributes":[{"subj":"T60","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T61","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T62","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T63","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T64","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T65","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T77","span":{"begin":0,"end":369},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T77","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"202","span":{"begin":62,"end":70},"obj":"Species"},{"id":"203","span":{"begin":278,"end":286},"obj":"Species"},{"id":"204","span":{"begin":310,"end":318},"obj":"Species"},{"id":"208","span":{"begin":39,"end":47},"obj":"Disease"},{"id":"209","span":{"begin":57,"end":61},"obj":"Disease"}],"attributes":[{"id":"A202","pred":"tao:has_database_id","subj":"202","obj":"Tax:9606"},{"id":"A203","pred":"tao:has_database_id","subj":"203","obj":"Tax:9606"},{"id":"A204","pred":"tao:has_database_id","subj":"204","obj":"Tax:9606"},{"id":"A208","pred":"tao:has_database_id","subj":"208","obj":"MESH:C000657245"},{"id":"A209","pred":"tao:has_database_id","subj":"209","obj":"MESH:D012128"},{"subj":"202","pred":"source","obj":"LitCovid-PubTator"},{"subj":"203","pred":"source","obj":"LitCovid-PubTator"},{"subj":"204","pred":"source","obj":"LitCovid-PubTator"},{"subj":"208","pred":"source","obj":"LitCovid-PubTator"},{"subj":"209","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#ecd693","default":true},{"id":"LitCovid-PD-UBERON","color":"#bc93ec"},{"id":"LitCovid-PD-MONDO","color":"#93eca2"},{"id":"LitCovid-PD-CLO","color":"#ec939d"},{"id":"LitCovid-sentences","color":"#93b7ec"},{"id":"LitCovid-PubTator","color":"#d1ec93"}]}]}}