PMC:7556165 / 63126-63571
Annnotations
LitCovid-sample-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T175 | 37-44 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T176 | 84-91 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T177 | 111-118 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T178 | 159-166 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-sample-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T378 | 0-445 | Sentence | denotes | One common PRR is NOD-like receptors protein 3 (NLRP3), which forms together with a protein caspase activating protein (ASC or apoptosis-associated speck-like protein containing a caspase recruitment domain) and pro-caspase 1, the inflammasome unit capable of recruiting proinflammatory cytokines and inducing cell lysis with further inflammation signals (Fernandes-Alnemri et al., 2007; Schroder and Tschopp, 2010; Wree et al., 2014; Figure 9). |
LitCovid-sample-Pubtator
| Id | Subject | Object | Predicate | Lexical cue | pubann:denotes |
|---|---|---|---|---|---|
| 1727 | 48-53 | Gene | denotes | NLRP3 | Gene:114548 |
| 1728 | 216-225 | Gene | denotes | caspase 1 | Gene:834 |
| 1731 | 334-346 | Disease | denotes | inflammation | MESH:D007249 |
LitCovid-sample-UniProt
| Id | Subject | Object | Predicate | Lexical cue | uniprot_id |
|---|---|---|---|---|---|
| T5874 | 37-46 | Protein | denotes | protein 3 | https://www.uniprot.org/uniprot/Q9JGT9|https://www.uniprot.org/uniprot/Q98663|https://www.uniprot.org/uniprot/Q8V3T9|https://www.uniprot.org/uniprot/Q6UBL8|https://www.uniprot.org/uniprot/Q6Q1S1|https://www.uniprot.org/uniprot/Q6E0W9|https://www.uniprot.org/uniprot/Q68Y30|https://www.uniprot.org/uniprot/Q5GA88|https://www.uniprot.org/uniprot/Q3LZX0|https://www.uniprot.org/uniprot/Q3I5J4|https://www.uniprot.org/uniprot/Q12988|https://www.uniprot.org/uniprot/Q0Q474|https://www.uniprot.org/uniprot/Q02967|https://www.uniprot.org/uniprot/Q00967|https://www.uniprot.org/uniprot/P09522|https://www.uniprot.org/uniprot/P05398|https://www.uniprot.org/uniprot/P03553|https://www.uniprot.org/uniprot/P03552|https://www.uniprot.org/uniprot/P03551 |
| T5893 | 82-91 | Protein | denotes | a protein | https://www.uniprot.org/uniprot/Q38365|https://www.uniprot.org/uniprot/P25244|https://www.uniprot.org/uniprot/P25243|https://www.uniprot.org/uniprot/P15966|https://www.uniprot.org/uniprot/P09676|https://www.uniprot.org/uniprot/P07394|https://www.uniprot.org/uniprot/P03632|https://www.uniprot.org/uniprot/P03610|https://www.uniprot.org/uniprot/O64306 |
| T5902 | 92-99 | Protein | denotes | caspase | https://www.uniprot.org/uniprot/Q9VAH1|https://www.uniprot.org/uniprot/O01382 |
| T5904 | 120-123 | Protein | denotes | ASC | https://www.uniprot.org/uniprot/P50427|https://www.uniprot.org/uniprot/P15589|https://www.uniprot.org/uniprot/P08842|https://www.uniprot.org/uniprot/B2RA47 |
| T5908 | 180-187 | Protein | denotes | caspase | https://www.uniprot.org/uniprot/Q9VAH1|https://www.uniprot.org/uniprot/O01382 |
| T5910 | 216-225 | Protein | denotes | caspase 1 | https://www.uniprot.org/uniprot/Q9W1N0|https://www.uniprot.org/uniprot/Q9UCN3|https://www.uniprot.org/uniprot/Q9TV13|https://www.uniprot.org/uniprot/Q9N2I1|https://www.uniprot.org/uniprot/Q9MZV7|https://www.uniprot.org/uniprot/Q9MZV6|https://www.uniprot.org/uniprot/Q6PI75|https://www.uniprot.org/uniprot/Q6GSS3|https://www.uniprot.org/uniprot/Q6DMQ1|https://www.uniprot.org/uniprot/Q53EY6|https://www.uniprot.org/uniprot/P89116|https://www.uniprot.org/uniprot/P43527|https://www.uniprot.org/uniprot/P29466|https://www.uniprot.org/uniprot/P29452|https://www.uniprot.org/uniprot/O02002|https://www.uniprot.org/uniprot/B5MDZ1 |
LitCovid-sample-PD-IDO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T254 | 310-314 | http://purl.obolibrary.org/obo/CL_0000000 | denotes | cell |
LitCovid-sample-PD-FMA
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T423 | 37-44 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T424 | 84-91 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T425 | 111-118 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T426 | 159-166 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T427 | 287-296 | Body_part | denotes | cytokines | http://purl.org/sig/ont/fma/fma84050 |
| T428 | 310-314 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
LitCovid-sample-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T368 | 18-21 | Disease | denotes | NOD | http://purl.obolibrary.org/obo/MONDO_0007435 |
| T369 | 120-123 | Disease | denotes | ASC | http://purl.obolibrary.org/obo/MONDO_0019018 |
| T370 | 334-346 | Disease | denotes | inflammation | http://purl.obolibrary.org/obo/MONDO_0021166 |
LitCovid-sample-PD-GO-BP-0
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T126 | 92-110 | http://purl.obolibrary.org/obo/GO_0006919 | denotes | caspase activating |
| T127 | 127-136 | http://purl.obolibrary.org/obo/GO_0006915 | denotes | apoptosis |
| T128 | 127-136 | http://purl.obolibrary.org/obo/GO_0097194 | denotes | apoptosis |
| T129 | 315-320 | http://purl.obolibrary.org/obo/GO_0019835 | denotes | lysis |
| T130 | 334-346 | http://purl.obolibrary.org/obo/GO_0006954 | denotes | inflammation |
LitCovid-sample-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T127 | 92-110 | http://purl.obolibrary.org/obo/GO_0006919 | denotes | caspase activating |
| T128 | 127-136 | http://purl.obolibrary.org/obo/GO_0097194 | denotes | apoptosis |
| T129 | 127-136 | http://purl.obolibrary.org/obo/GO_0006915 | denotes | apoptosis |
| T130 | 315-320 | http://purl.obolibrary.org/obo/GO_0019835 | denotes | lysis |
| T131 | 334-346 | http://purl.obolibrary.org/obo/GO_0006954 | denotes | inflammation |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 1727 | 48-53 | Gene | denotes | NLRP3 | Gene:114548 |
| 1728 | 216-225 | Gene | denotes | caspase 1 | Gene:834 |
| 1731 | 334-346 | Disease | denotes | inflammation | MESH:D007249 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T378 | 0-445 | Sentence | denotes | One common PRR is NOD-like receptors protein 3 (NLRP3), which forms together with a protein caspase activating protein (ASC or apoptosis-associated speck-like protein containing a caspase recruitment domain) and pro-caspase 1, the inflammasome unit capable of recruiting proinflammatory cytokines and inducing cell lysis with further inflammation signals (Fernandes-Alnemri et al., 2007; Schroder and Tschopp, 2010; Wree et al., 2014; Figure 9). |