PMC:7556165 / 51385-51639
Annnotations
LitCovid-sample-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T164 | 30-41 | Chemical | denotes | Pro-Pro-Ala | http://purl.obolibrary.org/obo/CHEBI_162578 |
| T165 | 68-79 | Chemical | denotes | Gly-Val-Glu | http://purl.obolibrary.org/obo/CHEBI_164159 |
| T166 | 80-83 | Chemical | denotes | Gly | http://purl.obolibrary.org/obo/CHEBI_15428 |
LitCovid-sample-PD-NCBITaxon
| Id | Subject | Object | Predicate | Lexical cue | ncbi_taxonomy_id |
|---|---|---|---|---|---|
| T298 | 0-8 | Species | denotes | SARS-CoV | NCBItxid:694009 |
| T299 | 0-4 | Species | denotes | SARS | NCBItxid:694009 |
| T300 | 87-97 | Species | denotes | SARS-CoV-2 | NCBItxid:2697049 |
| T301 | 87-91 | Species | denotes | SARS | NCBItxid:694009 |
LitCovid-sample-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T321 | 0-254 | Sentence | denotes | SARS-CoV RBM ridge contains a Pro-Pro-Ala motif that is replaced by Gly-Val-Glu-Gly in SARS-CoV-2 (residues 482–485), yielding a more compact loop able to engage more interactions with proximal ACE2 residues (e.g., Ser19 and Gln24) (Shang et al., 2020b). |
LitCovid-sample-Pubtator
| Id | Subject | Object | Predicate | Lexical cue | pubann:denotes |
|---|---|---|---|---|---|
| 1412 | 194-198 | Gene | denotes | ACE2 | Gene:59272 |
| 1432 | 0-8 | Species | denotes | SARS-CoV | Tax:694009 |
| 1433 | 87-97 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 1437 | 30-41 | Chemical | denotes | Pro-Pro-Ala | MESH:C027789 |
| 1438 | 68-83 | Chemical | denotes | Gly-Val-Glu-Gly | |
| 1439 | 215-220 | Chemical | denotes | Ser19 | |
| 1440 | 225-230 | Chemical | denotes | Gln24 |
LitCovid-sample-UniProt
| Id | Subject | Object | Predicate | Lexical cue | uniprot_id |
|---|---|---|---|---|---|
| T5619 | 194-198 | Protein | denotes | ACE2 | https://www.uniprot.org/uniprot/Q9UFZ6 |
LitCovid-sample-PD-FMA
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T393 | 13-18 | Body_part | denotes | ridge | http://purl.org/sig/ont/fma/fma75035 |
LitCovid-sample-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T271 | 0-8 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T272 | 0-4 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T273 | 87-97 | Disease | denotes | SARS-CoV-2 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T274 | 87-91 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-sample-PD-MAT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T127 | 185-193 | http://purl.obolibrary.org/obo/MAT_0000491 | denotes | proximal |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 1412 | 194-198 | Gene | denotes | ACE2 | Gene:59272 |
| 1432 | 0-8 | Species | denotes | SARS-CoV | Tax:694009 |
| 1433 | 87-97 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 1437 | 30-41 | Chemical | denotes | Pro-Pro-Ala | MESH:C027789 |
| 1438 | 68-83 | Chemical | denotes | Gly-Val-Glu-Gly | |
| 1439 | 215-220 | Chemical | denotes | Ser19 | |
| 1440 | 225-230 | Chemical | denotes | Gln24 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T321 | 0-254 | Sentence | denotes | SARS-CoV RBM ridge contains a Pro-Pro-Ala motif that is replaced by Gly-Val-Glu-Gly in SARS-CoV-2 (residues 482–485), yielding a more compact loop able to engage more interactions with proximal ACE2 residues (e.g., Ser19 and Gln24) (Shang et al., 2020b). |