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PMC:7556165 / 48885-49334 JSONTXT

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LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T262 38-44 Species denotes SARS-2 NCBItxid:2697049
T263 38-42 Species denotes SARS NCBItxid:694009
T264 78-84 Species denotes SARS-2 NCBItxid:2697049
T265 78-82 Species denotes SARS NCBItxid:694009
T266 116-122 Species denotes SARS-2 NCBItxid:2697049
T267 116-120 Species denotes SARS NCBItxid:694009
T268 166-172 Species denotes SARS-2 NCBItxid:2697049
T269 166-170 Species denotes SARS NCBItxid:694009
T270 219-225 Species denotes SARS-2 NCBItxid:2697049
T271 219-223 Species denotes SARS NCBItxid:694009
T272 269-275 Species denotes SARS-2 NCBItxid:2697049
T273 269-273 Species denotes SARS NCBItxid:694009
T274 317-323 Species denotes SARS-2 NCBItxid:2697049
T275 317-321 Species denotes SARS NCBItxid:694009
T276 384-390 Species denotes SARS-2 NCBItxid:2697049
T277 384-388 Species denotes SARS NCBItxid:694009

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T300 0-37 Sentence denotes Sequence KD (nM) Method References
T301 38-77 Sentence denotes SARS-2 S 14.7 SPR Wrapp et al., 2020
T302 78-115 Sentence denotes SARS-2 S 11.2 SPR Lei et al., 2020
T303 116-165 Sentence denotes SARS-2 S20–685 (S1) 94.6 SPR Wang et al., 2020
T304 166-218 Sentence denotes SARS-2 S319–541 (RBD) 133.3 SPR Wang et al., 2020
T305 219-268 Sentence denotes SARS-2 S319–541 (RBD) 4.7 SPR Lan et al., 2020
T306 269-316 Sentence denotes SARS-2 S319–529 44.2 SPR Shang et al., 2020b
T307 317-383 Sentence denotes SARS-2 S319–591 34.6 Biolayer interferometry Wrapp et al., 2020
T308 384-449 Sentence denotes SARS-2 S328–533 1.2 Biolayer interferometry Walls et al., 2020

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
1344 85-86 Gene denotes S Gene:43740568
1345 45-46 Gene denotes S Gene:43740568
1346 38-44 Species denotes SARS-2 Tax:2697049
1347 78-84 Species denotes SARS-2 Tax:2697049
1348 116-122 Species denotes SARS-2 Tax:2697049
1349 166-172 Species denotes SARS-2 Tax:2697049
1350 219-225 Species denotes SARS-2 Tax:2697049
1351 317-323 Species denotes SARS-2 Tax:2697049
1352 384-390 Species denotes SARS-2 Tax:2697049
1353 269-290 CellLine denotes SARS-2 S319–529 44.2 CVCL:Z232

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T5312 54-57 Protein denotes SPR https://www.uniprot.org/uniprot/Q9UBB1|https://www.uniprot.org/uniprot/Q98982|https://www.uniprot.org/uniprot/Q8R536|https://www.uniprot.org/uniprot/Q8BYR7|https://www.uniprot.org/uniprot/Q7ZY31|https://www.uniprot.org/uniprot/Q64105|https://www.uniprot.org/uniprot/Q63996|https://www.uniprot.org/uniprot/Q5DUB3|https://www.uniprot.org/uniprot/Q5DUB1|https://www.uniprot.org/uniprot/Q53GI9|https://www.uniprot.org/uniprot/Q17QK8|https://www.uniprot.org/uniprot/P35270|https://www.uniprot.org/uniprot/P30548|https://www.uniprot.org/uniprot/P30547|https://www.uniprot.org/uniprot/P25103|https://www.uniprot.org/uniprot/P18297|https://www.uniprot.org/uniprot/P14600|https://www.uniprot.org/uniprot/D6W5H2|https://www.uniprot.org/uniprot/B0BML7|https://www.uniprot.org/uniprot/A8K741|https://www.uniprot.org/uniprot/A8K150|https://www.uniprot.org/uniprot/A7YKV0
T5334 94-97 Protein denotes SPR https://www.uniprot.org/uniprot/Q9UBB1|https://www.uniprot.org/uniprot/Q98982|https://www.uniprot.org/uniprot/Q8R536|https://www.uniprot.org/uniprot/Q8BYR7|https://www.uniprot.org/uniprot/Q7ZY31|https://www.uniprot.org/uniprot/Q64105|https://www.uniprot.org/uniprot/Q63996|https://www.uniprot.org/uniprot/Q5DUB3|https://www.uniprot.org/uniprot/Q5DUB1|https://www.uniprot.org/uniprot/Q53GI9|https://www.uniprot.org/uniprot/Q17QK8|https://www.uniprot.org/uniprot/P35270|https://www.uniprot.org/uniprot/P30548|https://www.uniprot.org/uniprot/P30547|https://www.uniprot.org/uniprot/P25103|https://www.uniprot.org/uniprot/P18297|https://www.uniprot.org/uniprot/P14600|https://www.uniprot.org/uniprot/D6W5H2|https://www.uniprot.org/uniprot/B0BML7|https://www.uniprot.org/uniprot/A8K741|https://www.uniprot.org/uniprot/A8K150|https://www.uniprot.org/uniprot/A7YKV0
T5356 143-146 Protein denotes SPR https://www.uniprot.org/uniprot/Q9UBB1|https://www.uniprot.org/uniprot/Q98982|https://www.uniprot.org/uniprot/Q8R536|https://www.uniprot.org/uniprot/Q8BYR7|https://www.uniprot.org/uniprot/Q7ZY31|https://www.uniprot.org/uniprot/Q64105|https://www.uniprot.org/uniprot/Q63996|https://www.uniprot.org/uniprot/Q5DUB3|https://www.uniprot.org/uniprot/Q5DUB1|https://www.uniprot.org/uniprot/Q53GI9|https://www.uniprot.org/uniprot/Q17QK8|https://www.uniprot.org/uniprot/P35270|https://www.uniprot.org/uniprot/P30548|https://www.uniprot.org/uniprot/P30547|https://www.uniprot.org/uniprot/P25103|https://www.uniprot.org/uniprot/P18297|https://www.uniprot.org/uniprot/P14600|https://www.uniprot.org/uniprot/D6W5H2|https://www.uniprot.org/uniprot/B0BML7|https://www.uniprot.org/uniprot/A8K741|https://www.uniprot.org/uniprot/A8K150|https://www.uniprot.org/uniprot/A7YKV0
T5378 183-186 Protein denotes RBD https://www.uniprot.org/uniprot/Q63492|https://www.uniprot.org/uniprot/Q63491|https://www.uniprot.org/uniprot/Q62815|https://www.uniprot.org/uniprot/Q62691|https://www.uniprot.org/uniprot/Q01542|https://www.uniprot.org/uniprot/P27732|https://www.uniprot.org/uniprot/O09024|https://www.uniprot.org/uniprot/O09023|https://www.uniprot.org/uniprot/O09022
T5387 196-199 Protein denotes SPR https://www.uniprot.org/uniprot/Q9UBB1|https://www.uniprot.org/uniprot/Q98982|https://www.uniprot.org/uniprot/Q8R536|https://www.uniprot.org/uniprot/Q8BYR7|https://www.uniprot.org/uniprot/Q7ZY31|https://www.uniprot.org/uniprot/Q64105|https://www.uniprot.org/uniprot/Q63996|https://www.uniprot.org/uniprot/Q5DUB3|https://www.uniprot.org/uniprot/Q5DUB1|https://www.uniprot.org/uniprot/Q53GI9|https://www.uniprot.org/uniprot/Q17QK8|https://www.uniprot.org/uniprot/P35270|https://www.uniprot.org/uniprot/P30548|https://www.uniprot.org/uniprot/P30547|https://www.uniprot.org/uniprot/P25103|https://www.uniprot.org/uniprot/P18297|https://www.uniprot.org/uniprot/P14600|https://www.uniprot.org/uniprot/D6W5H2|https://www.uniprot.org/uniprot/B0BML7|https://www.uniprot.org/uniprot/A8K741|https://www.uniprot.org/uniprot/A8K150|https://www.uniprot.org/uniprot/A7YKV0
T5409 236-239 Protein denotes RBD https://www.uniprot.org/uniprot/Q63492|https://www.uniprot.org/uniprot/Q63491|https://www.uniprot.org/uniprot/Q62815|https://www.uniprot.org/uniprot/Q62691|https://www.uniprot.org/uniprot/Q01542|https://www.uniprot.org/uniprot/P27732|https://www.uniprot.org/uniprot/O09024|https://www.uniprot.org/uniprot/O09023|https://www.uniprot.org/uniprot/O09022
T5418 247-250 Protein denotes SPR https://www.uniprot.org/uniprot/Q9UBB1|https://www.uniprot.org/uniprot/Q98982|https://www.uniprot.org/uniprot/Q8R536|https://www.uniprot.org/uniprot/Q8BYR7|https://www.uniprot.org/uniprot/Q7ZY31|https://www.uniprot.org/uniprot/Q64105|https://www.uniprot.org/uniprot/Q63996|https://www.uniprot.org/uniprot/Q5DUB3|https://www.uniprot.org/uniprot/Q5DUB1|https://www.uniprot.org/uniprot/Q53GI9|https://www.uniprot.org/uniprot/Q17QK8|https://www.uniprot.org/uniprot/P35270|https://www.uniprot.org/uniprot/P30548|https://www.uniprot.org/uniprot/P30547|https://www.uniprot.org/uniprot/P25103|https://www.uniprot.org/uniprot/P18297|https://www.uniprot.org/uniprot/P14600|https://www.uniprot.org/uniprot/D6W5H2|https://www.uniprot.org/uniprot/B0BML7|https://www.uniprot.org/uniprot/A8K741|https://www.uniprot.org/uniprot/A8K150|https://www.uniprot.org/uniprot/A7YKV0
T5440 292-295 Protein denotes SPR https://www.uniprot.org/uniprot/Q9UBB1|https://www.uniprot.org/uniprot/Q98982|https://www.uniprot.org/uniprot/Q8R536|https://www.uniprot.org/uniprot/Q8BYR7|https://www.uniprot.org/uniprot/Q7ZY31|https://www.uniprot.org/uniprot/Q64105|https://www.uniprot.org/uniprot/Q63996|https://www.uniprot.org/uniprot/Q5DUB3|https://www.uniprot.org/uniprot/Q5DUB1|https://www.uniprot.org/uniprot/Q53GI9|https://www.uniprot.org/uniprot/Q17QK8|https://www.uniprot.org/uniprot/P35270|https://www.uniprot.org/uniprot/P30548|https://www.uniprot.org/uniprot/P30547|https://www.uniprot.org/uniprot/P25103|https://www.uniprot.org/uniprot/P18297|https://www.uniprot.org/uniprot/P14600|https://www.uniprot.org/uniprot/D6W5H2|https://www.uniprot.org/uniprot/B0BML7|https://www.uniprot.org/uniprot/A8K741|https://www.uniprot.org/uniprot/A8K150|https://www.uniprot.org/uniprot/A7YKV0

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T242 38-42 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T243 78-82 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T244 116-120 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T245 166-170 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T246 219-223 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T247 269-273 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T248 317-321 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T249 384-388 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1344 85-86 Gene denotes S Gene:43740568
1345 45-46 Gene denotes S Gene:43740568
1346 38-44 Species denotes SARS-2 Tax:2697049
1347 78-84 Species denotes SARS-2 Tax:2697049
1348 116-122 Species denotes SARS-2 Tax:2697049
1349 166-172 Species denotes SARS-2 Tax:2697049
1350 219-225 Species denotes SARS-2 Tax:2697049
1351 297-323 Species denotes Shang et al., 2020b SARS-2 Tax:2697049
1352 384-390 Species denotes SARS-2 Tax:2697049
1353 269-290 CellLine denotes SARS-2 S319–529 44.2 CVCL:Z232

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T300 0-37 Sentence denotes Sequence KD (nM) Method References
T301 38-77 Sentence denotes SARS-2 S 14.7 SPR Wrapp et al., 2020
T302 78-115 Sentence denotes SARS-2 S 11.2 SPR Lei et al., 2020
T303 116-165 Sentence denotes SARS-2 S20–685 (S1) 94.6 SPR Wang et al., 2020
T304 166-218 Sentence denotes SARS-2 S319–541 (RBD) 133.3 SPR Wang et al., 2020
T305 219-268 Sentence denotes SARS-2 S319–541 (RBD) 4.7 SPR Lan et al., 2020
T306 269-316 Sentence denotes SARS-2 S319–529 44.2 SPR Shang et al., 2020b
T307 317-383 Sentence denotes SARS-2 S319–591 34.6 Biolayer interferometry Wrapp et al., 2020
T308 384-449 Sentence denotes SARS-2 S328–533 1.2 Biolayer interferometry Walls et al., 2020