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PMC:7556165 / 42245-42513 JSONTXT

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LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T150 11-18 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T151 138-145 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T173 22-32 Species denotes SARS-CoV-2 NCBItxid:2697049
T174 22-26 Species denotes SARS NCBItxid:694009

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T260 67-155 Sentence denotes Note the single RBD protruding out of the V-shaped conformation of the protein assembly.
T261 156-204 Sentence denotes The structures have been drawn from PDB 6X2C (R.
T262 205-268 Sentence denotes Henderson, 10.1101/2020.05.18.10208) by Mol on the PDB website.

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
1139 256-259 Gene denotes PDB Gene:5131
1140 9-10 Gene denotes S Gene:43740568
1141 22-32 Species denotes SARS-CoV-2 Tax:2697049

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T3546 9-18 Protein denotes S protein https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9
T3579 83-86 Protein denotes RBD https://www.uniprot.org/uniprot/Q63492|https://www.uniprot.org/uniprot/Q63491|https://www.uniprot.org/uniprot/Q62815|https://www.uniprot.org/uniprot/Q62691|https://www.uniprot.org/uniprot/Q01542|https://www.uniprot.org/uniprot/P27732|https://www.uniprot.org/uniprot/O09024|https://www.uniprot.org/uniprot/O09023|https://www.uniprot.org/uniprot/O09022

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T350 11-18 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T351 138-145 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T162 22-32 Disease denotes SARS-CoV-2 http://purl.obolibrary.org/obo/MONDO_0100096
T163 22-26 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1139 256-259 Gene denotes PDB Gene:5131
1140 9-10 Gene denotes S Gene:43740568
1141 22-32 Species denotes SARS-CoV-2 Tax:2697049

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T260 67-155 Sentence denotes Note the single RBD protruding out of the V-shaped conformation of the protein assembly.
T261 156-204 Sentence denotes The structures have been drawn from PDB 6X2C (R.
T262 205-268 Sentence denotes Henderson, 10.1101/2020.05.18.10208) by Mol on the PDB website.