PMC:7556165 / 42235-42513
Annnotations
LitCovid-sample-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T150 | 21-28 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T151 | 148-155 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-sample-PD-NCBITaxon
| Id | Subject | Object | Predicate | Lexical cue | ncbi_taxonomy_id |
|---|---|---|---|---|---|
| T173 | 32-42 | Species | denotes | SARS-CoV-2 | NCBItxid:2697049 |
| T174 | 32-36 | Species | denotes | SARS | NCBItxid:694009 |
LitCovid-sample-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T259 | 0-76 | Sentence | denotes | FIGURE 6 Trimeric S protein of SARS-CoV-2 in the ”Closed” and “Open” forms. |
| T260 | 77-165 | Sentence | denotes | Note the single RBD protruding out of the V-shaped conformation of the protein assembly. |
| T261 | 166-214 | Sentence | denotes | The structures have been drawn from PDB 6X2C (R. |
| T262 | 215-278 | Sentence | denotes | Henderson, 10.1101/2020.05.18.10208) by Mol on the PDB website. |
LitCovid-sample-Pubtator
| Id | Subject | Object | Predicate | Lexical cue | pubann:denotes |
|---|---|---|---|---|---|
| 1139 | 266-269 | Gene | denotes | PDB | Gene:5131 |
| 1140 | 19-20 | Gene | denotes | S | Gene:43740568 |
| 1141 | 32-42 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
LitCovid-sample-UniProt
| Id | Subject | Object | Predicate | Lexical cue | uniprot_id |
|---|---|---|---|---|---|
| T3546 | 19-28 | Protein | denotes | S protein | https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9 |
| T3579 | 93-96 | Protein | denotes | RBD | https://www.uniprot.org/uniprot/Q63492|https://www.uniprot.org/uniprot/Q63491|https://www.uniprot.org/uniprot/Q62815|https://www.uniprot.org/uniprot/Q62691|https://www.uniprot.org/uniprot/Q01542|https://www.uniprot.org/uniprot/P27732|https://www.uniprot.org/uniprot/O09024|https://www.uniprot.org/uniprot/O09023|https://www.uniprot.org/uniprot/O09022 |
LitCovid-sample-PD-FMA
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T350 | 21-28 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T351 | 148-155 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-sample-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T162 | 32-42 | Disease | denotes | SARS-CoV-2 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T163 | 32-36 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 1139 | 266-269 | Gene | denotes | PDB | Gene:5131 |
| 1140 | 19-20 | Gene | denotes | S | Gene:43740568 |
| 1141 | 32-42 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T259 | 0-76 | Sentence | denotes | FIGURE 6 Trimeric S protein of SARS-CoV-2 in the ”Closed” and “Open” forms. |
| T260 | 77-165 | Sentence | denotes | Note the single RBD protruding out of the V-shaped conformation of the protein assembly. |
| T261 | 166-214 | Sentence | denotes | The structures have been drawn from PDB 6X2C (R. |
| T262 | 215-278 | Sentence | denotes | Henderson, 10.1101/2020.05.18.10208) by Mol on the PDB website. |