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PMC:7556165 / 31154-31888 JSONTXT

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LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T81 114-120 Species denotes sepsis NCBItxid:137507
T82 153-160 Species denotes anthrax NCBItxid:1392
T83 196-210 Species denotes H5N1 avian flu NCBItxid:102793
T84 215-219 Species denotes SARS NCBItxid:694009
T85 264-268 Species denotes mice NCBItxid:10095|NCBItxid:10088
T87 360-366 Species denotes sepsis NCBItxid:137507

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T193 0-221 Sentence denotes ARDS is an overly aggressive form of ALI and it is the final mechanism of lung injury in many diseases, including sepsis, acid aspiration, pancreatitis, anthrax and virus infections (Spanish flu, H5N1 avian flu and SARS).
T194 222-367 Sentence denotes Imai et al. developed three ACE2 knockout mice models with severe ARDS induced by acid aspiration, endotoxin administration or peritoneal sepsis.
T195 368-589 Sentence denotes They showed that ARDS was accompanied by increased vessel permeability, lung oedema, and infiltration of inflammation cells, with consequent impairment of respiratory function (Imai et al., 2005, 2007; Kuba et al., 2006).
T196 590-734 Sentence denotes The phenotype was dramatically improved and rescued either administering ACE2 recombinant analogs or AT1Ra inhibitors (Imai et al., 2005, 2008).

LitCovid-sample-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T128 74-78 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T129 419-425 Body_part denotes vessel http://purl.obolibrary.org/obo/UBERON_0000055
T130 440-444 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
858 250-254 Gene denotes ACE2 Gene:70008
859 663-667 Gene denotes ACE2 Gene:70008
860 153-160 Species denotes anthrax Tax:1392
861 196-200 Species denotes H5N1 Tax:102793
862 264-268 Species denotes mice Tax:10090
863 0-4 Disease denotes ARDS MESH:D012128
864 74-85 Disease denotes lung injury MESH:D055370
865 114-120 Disease denotes sepsis MESH:D018805
866 139-151 Disease denotes pancreatitis MESH:D010195
867 165-181 Disease denotes virus infections MESH:D001102
868 288-292 Disease denotes ARDS MESH:D012128
869 360-366 Disease denotes sepsis MESH:D018805
870 385-389 Disease denotes ARDS MESH:D012128
871 440-451 Disease denotes lung oedema MESH:D004487
872 473-485 Disease denotes inflammation MESH:D007249
873 509-543 Disease denotes impairment of respiratory function MESH:D012131

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T2512 250-254 Protein denotes ACE2 https://www.uniprot.org/uniprot/Q9UFZ6
T2513 663-667 Protein denotes ACE2 https://www.uniprot.org/uniprot/Q9UFZ6

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T86 94-102 http://purl.obolibrary.org/obo/OGMS_0000031 denotes diseases
T87 114-120 http://purl.obolibrary.org/obo/IDO_0000636 denotes sepsis
T88 165-170 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T89 171-181 http://purl.obolibrary.org/obo/IDO_0000586 denotes infections
T90 321-330 http://purl.obolibrary.org/obo/IDO_0000552 denotes endotoxin
T91 360-366 http://purl.obolibrary.org/obo/IDO_0000636 denotes sepsis
T92 486-491 http://purl.obolibrary.org/obo/CL_0000000 denotes cells
T93 535-543 http://purl.obolibrary.org/obo/BFO_0000034 denotes function

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T280 74-78 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T281 440-444 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T282 486-491 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T76 0-4 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T77 37-40 Disease denotes ALI http://purl.obolibrary.org/obo/MONDO_0006502
T78 79-85 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T79 139-151 Disease denotes pancreatitis http://purl.obolibrary.org/obo/MONDO_0004982
T80 153-160 Disease denotes anthrax http://purl.obolibrary.org/obo/MONDO_0005119
T81 165-181 Disease denotes virus infections http://purl.obolibrary.org/obo/MONDO_0005108
T82 191-194 Disease denotes flu http://purl.obolibrary.org/obo/MONDO_0005812
T83 201-210 Disease denotes avian flu http://purl.obolibrary.org/obo/MONDO_0018695
T84 215-219 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T85 288-292 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T86 385-389 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T87 473-485 Disease denotes inflammation http://purl.obolibrary.org/obo/MONDO_0021166

LitCovid-sample-PD-MAT

Id Subject Object Predicate Lexical cue
T118 74-78 http://purl.obolibrary.org/obo/MAT_0000135 denotes lung
T119 419-425 http://purl.obolibrary.org/obo/MAT_0000393 denotes vessel
T120 440-444 http://purl.obolibrary.org/obo/MAT_0000135 denotes lung

LitCovid-sample-PD-GO-BP-0

Id Subject Object Predicate Lexical cue
T80 473-485 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammation

LitCovid-sample-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T30 139-151 Phenotype denotes pancreatitis http://purl.obolibrary.org/obo/HP_0001733
T31 309-319 Phenotype denotes aspiration http://purl.obolibrary.org/obo/HP_0002835
T32 360-366 Phenotype denotes sepsis http://purl.obolibrary.org/obo/HP_0100806
T33 445-451 Phenotype denotes oedema http://purl.obolibrary.org/obo/HP_0000969
T28 114-120 Phenotype denotes sepsis http://purl.obolibrary.org/obo/HP_0100806
T29 127-137 Phenotype denotes aspiration http://purl.obolibrary.org/obo/HP_0002835

LitCovid-sample-GO-BP

Id Subject Object Predicate Lexical cue
T83 473-485 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammation

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T30 37-40 Phenotype denotes ALI http://www.orpha.net/ORDO/Orphanet_178320
T31 114-120 Phenotype denotes sepsis http://purl.obolibrary.org/obo/HP_0100806
T32 127-137 Phenotype denotes aspiration http://purl.obolibrary.org/obo/HP_0002835
T33 139-151 Phenotype denotes pancreatitis http://purl.obolibrary.org/obo/HP_0001733
T34 309-319 Phenotype denotes aspiration http://purl.obolibrary.org/obo/HP_0002835
T35 360-366 Phenotype denotes sepsis http://purl.obolibrary.org/obo/HP_0100806
T36 445-451 Phenotype denotes oedema http://purl.obolibrary.org/obo/HP_0000969

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
858 250-254 Gene denotes ACE2 Gene:70008
859 663-667 Gene denotes ACE2 Gene:70008
860 153-160 Species denotes anthrax Tax:1392
861 196-200 Species denotes H5N1 Tax:102793
862 264-268 Species denotes mice Tax:10090
863 0-4 Disease denotes ARDS MESH:D012128
864 74-85 Disease denotes lung injury MESH:D055370
865 114-120 Disease denotes sepsis MESH:D018805
866 139-151 Disease denotes pancreatitis MESH:D010195
867 165-181 Disease denotes virus infections MESH:D001102
868 288-292 Disease denotes ARDS MESH:D012128
869 360-366 Disease denotes sepsis MESH:D018805
870 385-389 Disease denotes ARDS MESH:D012128
871 440-451 Disease denotes lung oedema MESH:D004487
872 473-485 Disease denotes inflammation MESH:D007249
873 509-543 Disease denotes impairment of respiratory function MESH:D012131

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T193 0-221 Sentence denotes ARDS is an overly aggressive form of ALI and it is the final mechanism of lung injury in many diseases, including sepsis, acid aspiration, pancreatitis, anthrax and virus infections (Spanish flu, H5N1 avian flu and SARS).
T194 222-367 Sentence denotes Imai et al. developed three ACE2 knockout mice models with severe ARDS induced by acid aspiration, endotoxin administration or peritoneal sepsis.
T195 368-589 Sentence denotes They showed that ARDS was accompanied by increased vessel permeability, lung oedema, and infiltration of inflammation cells, with consequent impairment of respiratory function (Imai et al., 2005, 2007; Kuba et al., 2006).
T196 590-734 Sentence denotes The phenotype was dramatically improved and rescued either administering ACE2 recombinant analogs or AT1Ra inhibitors (Imai et al., 2005, 2008).