PMC:7556165 / 31154-31888
Annnotations
LitCovid-sample-PD-NCBITaxon
Id | Subject | Object | Predicate | Lexical cue | ncbi_taxonomy_id |
---|---|---|---|---|---|
T81 | 114-120 | Species | denotes | sepsis | NCBItxid:137507 |
T82 | 153-160 | Species | denotes | anthrax | NCBItxid:1392 |
T83 | 196-210 | Species | denotes | H5N1 avian flu | NCBItxid:102793 |
T84 | 215-219 | Species | denotes | SARS | NCBItxid:694009 |
T85 | 264-268 | Species | denotes | mice | NCBItxid:10095|NCBItxid:10088 |
T87 | 360-366 | Species | denotes | sepsis | NCBItxid:137507 |
LitCovid-sample-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T193 | 0-221 | Sentence | denotes | ARDS is an overly aggressive form of ALI and it is the final mechanism of lung injury in many diseases, including sepsis, acid aspiration, pancreatitis, anthrax and virus infections (Spanish flu, H5N1 avian flu and SARS). |
T194 | 222-367 | Sentence | denotes | Imai et al. developed three ACE2 knockout mice models with severe ARDS induced by acid aspiration, endotoxin administration or peritoneal sepsis. |
T195 | 368-589 | Sentence | denotes | They showed that ARDS was accompanied by increased vessel permeability, lung oedema, and infiltration of inflammation cells, with consequent impairment of respiratory function (Imai et al., 2005, 2007; Kuba et al., 2006). |
T196 | 590-734 | Sentence | denotes | The phenotype was dramatically improved and rescued either administering ACE2 recombinant analogs or AT1Ra inhibitors (Imai et al., 2005, 2008). |
LitCovid-sample-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T128 | 74-78 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
T129 | 419-425 | Body_part | denotes | vessel | http://purl.obolibrary.org/obo/UBERON_0000055 |
T130 | 440-444 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
LitCovid-sample-Pubtator
Id | Subject | Object | Predicate | Lexical cue | pubann:denotes |
---|---|---|---|---|---|
858 | 250-254 | Gene | denotes | ACE2 | Gene:70008 |
859 | 663-667 | Gene | denotes | ACE2 | Gene:70008 |
860 | 153-160 | Species | denotes | anthrax | Tax:1392 |
861 | 196-200 | Species | denotes | H5N1 | Tax:102793 |
862 | 264-268 | Species | denotes | mice | Tax:10090 |
863 | 0-4 | Disease | denotes | ARDS | MESH:D012128 |
864 | 74-85 | Disease | denotes | lung injury | MESH:D055370 |
865 | 114-120 | Disease | denotes | sepsis | MESH:D018805 |
866 | 139-151 | Disease | denotes | pancreatitis | MESH:D010195 |
867 | 165-181 | Disease | denotes | virus infections | MESH:D001102 |
868 | 288-292 | Disease | denotes | ARDS | MESH:D012128 |
869 | 360-366 | Disease | denotes | sepsis | MESH:D018805 |
870 | 385-389 | Disease | denotes | ARDS | MESH:D012128 |
871 | 440-451 | Disease | denotes | lung oedema | MESH:D004487 |
872 | 473-485 | Disease | denotes | inflammation | MESH:D007249 |
873 | 509-543 | Disease | denotes | impairment of respiratory function | MESH:D012131 |
LitCovid-sample-UniProt
Id | Subject | Object | Predicate | Lexical cue | uniprot_id |
---|---|---|---|---|---|
T2512 | 250-254 | Protein | denotes | ACE2 | https://www.uniprot.org/uniprot/Q9UFZ6 |
T2513 | 663-667 | Protein | denotes | ACE2 | https://www.uniprot.org/uniprot/Q9UFZ6 |
LitCovid-sample-PD-IDO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T86 | 94-102 | http://purl.obolibrary.org/obo/OGMS_0000031 | denotes | diseases |
T87 | 114-120 | http://purl.obolibrary.org/obo/IDO_0000636 | denotes | sepsis |
T88 | 165-170 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T89 | 171-181 | http://purl.obolibrary.org/obo/IDO_0000586 | denotes | infections |
T90 | 321-330 | http://purl.obolibrary.org/obo/IDO_0000552 | denotes | endotoxin |
T91 | 360-366 | http://purl.obolibrary.org/obo/IDO_0000636 | denotes | sepsis |
T92 | 486-491 | http://purl.obolibrary.org/obo/CL_0000000 | denotes | cells |
T93 | 535-543 | http://purl.obolibrary.org/obo/BFO_0000034 | denotes | function |
LitCovid-sample-PD-FMA
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T280 | 74-78 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
T281 | 440-444 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
T282 | 486-491 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
LitCovid-sample-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T76 | 0-4 | Disease | denotes | ARDS | http://purl.obolibrary.org/obo/MONDO_0006502 |
T77 | 37-40 | Disease | denotes | ALI | http://purl.obolibrary.org/obo/MONDO_0006502 |
T78 | 79-85 | Disease | denotes | injury | http://purl.obolibrary.org/obo/MONDO_0021178 |
T79 | 139-151 | Disease | denotes | pancreatitis | http://purl.obolibrary.org/obo/MONDO_0004982 |
T80 | 153-160 | Disease | denotes | anthrax | http://purl.obolibrary.org/obo/MONDO_0005119 |
T81 | 165-181 | Disease | denotes | virus infections | http://purl.obolibrary.org/obo/MONDO_0005108 |
T82 | 191-194 | Disease | denotes | flu | http://purl.obolibrary.org/obo/MONDO_0005812 |
T83 | 201-210 | Disease | denotes | avian flu | http://purl.obolibrary.org/obo/MONDO_0018695 |
T84 | 215-219 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T85 | 288-292 | Disease | denotes | ARDS | http://purl.obolibrary.org/obo/MONDO_0006502 |
T86 | 385-389 | Disease | denotes | ARDS | http://purl.obolibrary.org/obo/MONDO_0006502 |
T87 | 473-485 | Disease | denotes | inflammation | http://purl.obolibrary.org/obo/MONDO_0021166 |
LitCovid-sample-PD-MAT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T118 | 74-78 | http://purl.obolibrary.org/obo/MAT_0000135 | denotes | lung |
T119 | 419-425 | http://purl.obolibrary.org/obo/MAT_0000393 | denotes | vessel |
T120 | 440-444 | http://purl.obolibrary.org/obo/MAT_0000135 | denotes | lung |
LitCovid-sample-PD-GO-BP-0
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T80 | 473-485 | http://purl.obolibrary.org/obo/GO_0006954 | denotes | inflammation |
LitCovid-sample-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T30 | 139-151 | Phenotype | denotes | pancreatitis | http://purl.obolibrary.org/obo/HP_0001733 |
T31 | 309-319 | Phenotype | denotes | aspiration | http://purl.obolibrary.org/obo/HP_0002835 |
T32 | 360-366 | Phenotype | denotes | sepsis | http://purl.obolibrary.org/obo/HP_0100806 |
T33 | 445-451 | Phenotype | denotes | oedema | http://purl.obolibrary.org/obo/HP_0000969 |
T28 | 114-120 | Phenotype | denotes | sepsis | http://purl.obolibrary.org/obo/HP_0100806 |
T29 | 127-137 | Phenotype | denotes | aspiration | http://purl.obolibrary.org/obo/HP_0002835 |
LitCovid-sample-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T83 | 473-485 | http://purl.obolibrary.org/obo/GO_0006954 | denotes | inflammation |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T30 | 37-40 | Phenotype | denotes | ALI | http://www.orpha.net/ORDO/Orphanet_178320 |
T31 | 114-120 | Phenotype | denotes | sepsis | http://purl.obolibrary.org/obo/HP_0100806 |
T32 | 127-137 | Phenotype | denotes | aspiration | http://purl.obolibrary.org/obo/HP_0002835 |
T33 | 139-151 | Phenotype | denotes | pancreatitis | http://purl.obolibrary.org/obo/HP_0001733 |
T34 | 309-319 | Phenotype | denotes | aspiration | http://purl.obolibrary.org/obo/HP_0002835 |
T35 | 360-366 | Phenotype | denotes | sepsis | http://purl.obolibrary.org/obo/HP_0100806 |
T36 | 445-451 | Phenotype | denotes | oedema | http://purl.obolibrary.org/obo/HP_0000969 |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
858 | 250-254 | Gene | denotes | ACE2 | Gene:70008 |
859 | 663-667 | Gene | denotes | ACE2 | Gene:70008 |
860 | 153-160 | Species | denotes | anthrax | Tax:1392 |
861 | 196-200 | Species | denotes | H5N1 | Tax:102793 |
862 | 264-268 | Species | denotes | mice | Tax:10090 |
863 | 0-4 | Disease | denotes | ARDS | MESH:D012128 |
864 | 74-85 | Disease | denotes | lung injury | MESH:D055370 |
865 | 114-120 | Disease | denotes | sepsis | MESH:D018805 |
866 | 139-151 | Disease | denotes | pancreatitis | MESH:D010195 |
867 | 165-181 | Disease | denotes | virus infections | MESH:D001102 |
868 | 288-292 | Disease | denotes | ARDS | MESH:D012128 |
869 | 360-366 | Disease | denotes | sepsis | MESH:D018805 |
870 | 385-389 | Disease | denotes | ARDS | MESH:D012128 |
871 | 440-451 | Disease | denotes | lung oedema | MESH:D004487 |
872 | 473-485 | Disease | denotes | inflammation | MESH:D007249 |
873 | 509-543 | Disease | denotes | impairment of respiratory function | MESH:D012131 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T193 | 0-221 | Sentence | denotes | ARDS is an overly aggressive form of ALI and it is the final mechanism of lung injury in many diseases, including sepsis, acid aspiration, pancreatitis, anthrax and virus infections (Spanish flu, H5N1 avian flu and SARS). |
T194 | 222-367 | Sentence | denotes | Imai et al. developed three ACE2 knockout mice models with severe ARDS induced by acid aspiration, endotoxin administration or peritoneal sepsis. |
T195 | 368-589 | Sentence | denotes | They showed that ARDS was accompanied by increased vessel permeability, lung oedema, and infiltration of inflammation cells, with consequent impairment of respiratory function (Imai et al., 2005, 2007; Kuba et al., 2006). |
T196 | 590-734 | Sentence | denotes | The phenotype was dramatically improved and rescued either administering ACE2 recombinant analogs or AT1Ra inhibitors (Imai et al., 2005, 2008). |