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PMC:7555630 / 6853-8350 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T6 699-719 Body_part denotes left upper extremity http://purl.org/sig/ont/fma/fma7186
T7 819-827 Body_part denotes antibody http://purl.org/sig/ont/fma/fma62871
T8 1151-1162 Body_part denotes vasculature http://purl.org/sig/ont/fma/fma69050

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T4 1151-1162 Body_part denotes vasculature http://purl.obolibrary.org/obo/UBERON_0002049

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T66 67-84 Disease denotes movement disorder http://purl.obolibrary.org/obo/MONDO_0005395
T67 139-156 Disease denotes cerebellar ataxia http://purl.obolibrary.org/obo/MONDO_0000437
T68 282-290 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T69 385-393 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T70 466-468 Disease denotes he http://purl.obolibrary.org/obo/MONDO_0017319
T71 675-677 Disease denotes he http://purl.obolibrary.org/obo/MONDO_0017319
T72 720-726 Disease denotes ataxia http://purl.obolibrary.org/obo/MONDO_0000437
T73 840-848 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T74 911-961 Disease denotes acute inflammatory demyelinating polyradiculopathy http://purl.obolibrary.org/obo/MONDO_0020347
T75 944-961 Disease denotes polyradiculopathy http://purl.obolibrary.org/obo/MONDO_0002960
T76 1058-1064 Disease denotes ataxia http://purl.obolibrary.org/obo/MONDO_0000437
T77 1314-1322 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T23 44-45 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T24 65-66 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T25 271-277 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tested
T26 365-371 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tested
T27 416-418 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T28 452-453 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T29 710-719 http://www.ebi.ac.uk/efo/EFO_0000876 denotes extremity
T30 780-786 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tested
T31 828-835 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T32 871-882 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing was
T33 975-976 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T34 984-987 http://purl.obolibrary.org/obo/PR_000002979 denotes tap
T35 1093-1100 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T36 1264-1265 http://purl.obolibrary.org/obo/CLO_0001020 denotes A

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T37 67-84 Phenotype denotes movement disorder http://purl.obolibrary.org/obo/HP_0100022
T38 139-156 Phenotype denotes cerebellar ataxia http://purl.obolibrary.org/obo/HP_0001251
T39 211-216 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T40 218-223 Phenotype denotes cough http://purl.obolibrary.org/obo/HP_0012735
T41 225-244 Phenotype denotes shortness of breath http://purl.obolibrary.org/obo/HP_0002098
T42 250-257 Phenotype denotes fatigue http://purl.obolibrary.org/obo/HP_0012378
T43 535-542 Phenotype denotes tremors http://purl.obolibrary.org/obo/HP_0001337
T44 544-560 Phenotype denotes gait instability http://purl.obolibrary.org/obo/HP_0002317
T45 562-572 Phenotype denotes dysarthria http://purl.obolibrary.org/obo/HP_0001260
T46 578-585 Phenotype denotes vertigo http://purl.obolibrary.org/obo/HP_0002321
T47 625-642 Phenotype denotes memory impairment http://purl.obolibrary.org/obo/HP_0002354
T48 720-726 Phenotype denotes ataxia http://purl.obolibrary.org/obo/HP_0001251
T49 732-739 Phenotype denotes vertigo http://purl.obolibrary.org/obo/HP_0002321
T50 758-765 Phenotype denotes tremors http://purl.obolibrary.org/obo/HP_0001337
T51 930-943 Phenotype denotes demyelinating http://purl.obolibrary.org/obo/HP_0011096
T52 1058-1064 Phenotype denotes ataxia http://purl.obolibrary.org/obo/HP_0001251

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T3 614-631 http://purl.obolibrary.org/obo/GO_0007614 denotes short-term memory
T4 625-631 http://purl.obolibrary.org/obo/GO_0007613 denotes memory

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T41 0-157 Sentence denotes This last patient (patient 21) did not have a prior diagnosis of a movement disorder, but rather was referred to our program for new-onset cerebellar ataxia.
T42 158-304 Sentence denotes He presented one month prior to our evaluation, with fever, cough, shortness of breath, and fatigue, but was not tested for COVID-19 at that time.
T43 305-396 Sentence denotes His wife developed similar symptoms two days later, and she tested positive for SARS-CoV-2.
T44 397-445 Sentence denotes He recovered after 11 days and returned to work.
T45 446-586 Sentence denotes About a week later, he developed symptoms of cerebellar dysfunction, including disabling tremors, gait instability, dysarthria, and vertigo.
T46 587-643 Sentence denotes He also complained of mild short-term memory impairment.
T47 644-776 Sentence denotes On presentation to our center, he had notable gait and left upper extremity ataxia, but vertigo had resolved, and tremors were mild.
T48 777-851 Sentence denotes He tested positive on both the rt-PCR and antibody testing for SARS-CoV-2.
T49 852-962 Sentence denotes Electrophysiologic testing was negative for evidence of an acute inflammatory demyelinating polyradiculopathy.
T50 963-988 Sentence denotes He declined a spinal tap.
T51 989-1101 Sentence denotes Possible autoimmune, paraneoplastic and metabolic causes of subacute ataxia were negative on laboratory testing.
T52 1102-1263 Sentence denotes Cranial MRI showed mild prominence of cerebellar vasculature at the surface, which was described as nonspecific, but possibly seen with an inflammatory etiology.
T53 1264-1336 Sentence denotes A diagnosis of post-viral cerebellitis related to COVID-19 was proposed.
T54 1337-1420 Sentence denotes He continued to improve, without any further intervention, over the next few weeks.
T55 1421-1497 Sentence denotes By the time of this reporting, most symptoms had almost completely resolved.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
232 10-17 Species denotes patient Tax:9606
233 19-26 Species denotes patient Tax:9606
234 385-395 Species denotes SARS-CoV-2 Tax:2697049
235 840-850 Species denotes SARS-CoV-2 Tax:2697049
236 67-84 Disease denotes movement disorder MESH:D009069
237 139-156 Disease denotes cerebellar ataxia MESH:D002524
238 211-216 Disease denotes fever MESH:D005334
239 218-223 Disease denotes cough MESH:D003371
240 225-244 Disease denotes shortness of breath MESH:D004417
241 250-257 Disease denotes fatigue MESH:D005221
242 282-290 Disease denotes COVID-19 MESH:C000657245
243 491-513 Disease denotes cerebellar dysfunction MESH:D002526
244 535-542 Disease denotes tremors MESH:D014202
245 562-572 Disease denotes dysarthria MESH:D004401
246 578-585 Disease denotes vertigo MESH:D014717
247 625-642 Disease denotes memory impairment MESH:D008569
248 704-726 Disease denotes upper extremity ataxia MESH:D009207
249 732-739 Disease denotes vertigo MESH:D014717
250 758-765 Disease denotes tremors MESH:D014202
251 930-961 Disease denotes demyelinating polyradiculopathy MESH:D011128
252 1010-1024 Disease denotes paraneoplastic MESH:D010257
253 1058-1064 Disease denotes ataxia MESH:D001259
254 1284-1302 Disease denotes viral cerebellitis
255 1314-1322 Disease denotes COVID-19 MESH:C000657245