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PMC:7553147 / 39333-40211 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T80 68-71 Body_part denotes map http://purl.org/sig/ont/fma/fma67847
T81 738-749 Body_part denotes amino acids http://purl.org/sig/ont/fma/fma82739
T82 808-819 Body_part denotes amino acids http://purl.org/sig/ont/fma/fma82739

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T13 431-436 Body_part denotes scale http://purl.obolibrary.org/obo/UBERON_0002542

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T276 22-27 http://purl.obolibrary.org/obo/CLO_0001627 denotes (a) A
T277 461-462 http://purl.obolibrary.org/obo/CLO_0001021 denotes b

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T273 181-342 Sentence denotes Note the elastic analysis of deformations performed on the Class 1 and Class 2 maps (see the main text), with 1s referring to ‘stretching’ and 1r to ‘rotations’.
T274 343-426 Sentence denotes The color code is from blue for minimal deformation to red for maximal deformation.
T275 427-570 Sentence denotes The scale bar is 5 nm in length. (b) Representation of the angles defined by the spike when transitioning between the opened and closed states.
T276 571-653 Sentence denotes The regions shown in magenta represent the hinges used by the RBD domain to pivot.
T277 654-715 Sentence denotes Note that each hinge encompasses two different chain regions.
T278 716-840 Sentence denotes The first hinge spans amino acids 318–326 and 588–595, while the second hinge is defined by amino acids 330–335 and 527–531.
T279 841-878 Sentence denotes The angles were measured using PyMOL.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
356 240-259 Gene denotes Class 1 and Class 2
357 508-513 Gene denotes spike Gene:43740568