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PMC:7553147 / 12505-13466 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T15 318-321 Body_part denotes map http://purl.org/sig/ont/fma/fma67847
T16 390-393 Body_part denotes map http://purl.org/sig/ont/fma/fma67847
T17 475-478 Body_part denotes map http://purl.org/sig/ont/fma/fma67847
T18 554-557 Body_part denotes map http://purl.org/sig/ont/fma/fma67847
T19 721-724 Body_part denotes map http://purl.org/sig/ont/fma/fma67847

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T12 913-916 Disease denotes NTD http://purl.obolibrary.org/obo/MONDO_0008449|http://purl.obolibrary.org/obo/MONDO_0018075

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T75 305-306 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T76 352-357 http://purl.obolibrary.org/obo/CLO_0009985 denotes focus
T77 605-606 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T78 615-616 http://purl.obolibrary.org/obo/CLO_0001021 denotes b

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T87 0-4 Sentence denotes 2.4.
T88 6-39 Sentence denotes Validation and quality analysis  
T89 40-285 Sentence denotes To judge the quality of our structural results, we concentrated here on three of the newest approaches: directional local resolution (Vilas et al., 2020 ▸), Q-score (Pintilie et al., 2020 ▸) and FSC-Q (Ramirez-Aportela, Maluenda et al., 2020 ▸).
T90 286-541 Sentence denotes The first provides a measure of map quality, while the latter two focus on the relationship between the map and the structural model; in other words, how well the model is supported by the map density, without any other complementary piece of information.
T91 542-601 Sentence denotes In terms of map-to-model validation, in Supplementary Figs.
T92 602-766 Sentence denotes S3(a) and S3(b) we present Q-score and FSC-Q metrics, respectively, showing the agreement between the ensemble cryo-EM map and the structural model derived from it.
T93 767-961 Sentence denotes In most areas the agreement is very good, with the exception of the receptor-binding domain (RBD) and substantial parts of the N-terminal domain (NTD), as expected from their higher flexibility.