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PMC:7546716 / 28930-29861 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T549 127-130 Body_part denotes CSF http://purl.org/sig/ont/fma/fma20935
T550 151-162 Body_part denotes fibroblasts http://purl.org/sig/ont/fma/fma63877
T551 271-281 Body_part denotes E-selectin http://purl.org/sig/ont/fma/fma62932
T552 291-293 Body_part denotes IL http://purl.org/sig/ont/fma/fma86578
T553 317-319 Body_part denotes IL http://purl.org/sig/ont/fma/fma86578
T554 554-556 Body_part denotes IL http://purl.org/sig/ont/fma/fma86578
T555 608-612 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T556 624-626 Body_part denotes IL http://purl.org/sig/ont/fma/fma86578
T557 631-635 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T558 680-685 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T559 696-698 Body_part denotes IL http://purl.org/sig/ont/fma/fma86578
T560 705-707 Body_part denotes IL http://purl.org/sig/ont/fma/fma86578
T561 718-723 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T169 38-46 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T170 88-91 Disease denotes MAS http://purl.obolibrary.org/obo/MONDO_0015545
T171 212-228 Disease denotes Kawasaki disease http://purl.obolibrary.org/obo/MONDO_0012727
T172 384-400 Disease denotes Kawasaki disease http://purl.obolibrary.org/obo/MONDO_0012727
T173 468-484 Disease denotes Behçet's disease http://purl.obolibrary.org/obo/MONDO_0007191
T174 894-906 Disease denotes coagulopathy http://purl.obolibrary.org/obo/MONDO_0001531

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T399 151-162 http://purl.obolibrary.org/obo/CL_0000057 denotes fibroblasts
T400 196-201 http://purl.obolibrary.org/obo/CLO_0007836 denotes mouse
T401 266-269 http://purl.obolibrary.org/obo/CLO_0051025 denotes ST2
T402 454-456 http://purl.obolibrary.org/obo/CLO_0054055 denotes 71
T403 485-488 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T404 546-549 http://purl.obolibrary.org/obo/CLO_0051025 denotes ST2
T405 557-563 http://purl.obolibrary.org/obo/CLO_0001751 denotes 33, as
T406 606-612 http://purl.obolibrary.org/obo/CL_0000084 denotes T-cell
T407 631-635 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T408 678-685 http://purl.obolibrary.org/obo/CL_0000084 denotes T cells
T409 718-723 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T420 124-126 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120
T421 283-289 Chemical denotes CXCL10 http://purl.obolibrary.org/obo/CHEBI_138157
T422 291-293 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T424 317-319 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T426 554-556 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T428 582-588 Chemical denotes CXCL10 http://purl.obolibrary.org/obo/CHEBI_138157
T429 624-626 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T431 696-698 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T433 705-707 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T48 827-854 Phenotype denotes antiphospholipid antibodies http://purl.obolibrary.org/obo/HP_0003613
T49 894-906 Phenotype denotes coagulopathy http://purl.obolibrary.org/obo/HP_0003256

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T80 608-622 http://purl.obolibrary.org/obo/GO_0016049 denotes cell expansion

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T127 0-931 Sentence denotes Case series of children infected with SARS-CoV-2 who develop Kawasaki-like disease with MAS features have been described.68 GM-CSF produced by cardiac fibroblasts is key in disease progression in mouse models of Kawasaki disease, and significantly increased soluble ST2, E-selectin, CXCL10, IL-17F, and in some cases IL-9, have been reported in the circulation of patients with acute Kawasaki disease compared with other children who are febrile.69, 70, 71 Similarly, Behçet's disease has been associated with high concentrations of both soluble ST2 and IL-33, as well as increased CXCL10 and CCL2, Vγ9Vδ2 T-cell expansion, IL-17F gene polymorphisms, and intense recruitment of T cells producing IL-9 and IL-17 to the lungs.72, 73, 74, 75, 76 Some patients with either Behçet's disease77 or COVID-1978 also show positivity for antiphospholipid antibodies, which might further contribute to the coagulopathy seen in both conditions.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1216 124-130 Gene denotes GM-CSF Gene:12981
1217 266-269 Gene denotes ST2 Gene:17082
1218 271-281 Gene denotes E-selectin Gene:20339
1219 283-289 Gene denotes CXCL10 Gene:15945
1220 291-297 Gene denotes IL-17F Gene:257630
1221 317-321 Gene denotes IL-9 Gene:16198
1222 546-549 Gene denotes ST2 Gene:6761
1223 554-559 Gene denotes IL-33 Gene:90865
1224 582-588 Gene denotes CXCL10 Gene:3627
1225 593-597 Gene denotes CCL2 Gene:6347
1226 624-630 Gene denotes IL-17F Gene:112744
1227 696-700 Gene denotes IL-9 Gene:3578
1228 705-710 Gene denotes IL-17 Gene:3605
1229 15-23 Species denotes children Tax:9606
1230 38-48 Species denotes SARS-CoV-2 Tax:2697049
1231 196-201 Species denotes mouse Tax:10090
1232 364-372 Species denotes patients Tax:9606
1233 421-429 Species denotes children Tax:9606
1234 748-756 Species denotes patients Tax:9606
1235 24-32 Disease denotes infected MESH:D007239
1236 61-82 Disease denotes Kawasaki-like disease MESH:D009080
1237 212-228 Disease denotes Kawasaki disease MESH:D009080
1238 378-400 Disease denotes acute Kawasaki disease MESH:D009080
1239 791-799 Disease denotes COVID-19 MESH:C000657245
1240 894-906 Disease denotes coagulopathy MESH:D001778
1241 599-607 CellLine denotes Vγ9Vδ2 T CVCL:M092

2_test

Id Subject Object Predicate Lexical cue
33073244-32410760-66244618 121-123 32410760 denotes 68
33073244-27595596-66244619 446-448 27595596 denotes 69
33073244-25605650-66244620 450-452 25605650 denotes 70
33073244-21777987-66244621 454-456 21777987 denotes 71
33073244-23960440-66244622 724-726 23960440 denotes 72
33073244-24909741-66244623 728-730 24909741 denotes 73
33073244-17880773-66244624 732-734 17880773 denotes 74
33073244-18769923-66244625 736-738 18769923 denotes 75
33073244-31075294-66244626 740-742 31075294 denotes 76
33073244-32268022-66244627 797-801 32268022 denotes 1978