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PMC:7546716 / 2574-3510 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T32 150-154 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T33 349-354 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T34 408-411 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T35 439-450 Body_part denotes granulocyte http://purl.org/sig/ont/fma/fma62854
T36 451-461 Body_part denotes macrophage http://purl.org/sig/ont/fma/fma63261
T37 492-495 Body_part denotes CSF http://purl.org/sig/ont/fma/fma20935
T38 546-548 Body_part denotes IL http://purl.org/sig/ont/fma/fma86578
T39 578-583 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T40 646-650 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T41 786-794 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T4 578-583 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T5 646-650 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T33 14-17 Disease denotes MAS http://purl.obolibrary.org/obo/MONDO_0015545
T34 171-179 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T35 202-205 Disease denotes MAS http://purl.obolibrary.org/obo/MONDO_0015545
T36 298-306 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T37 603-611 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T38 651-657 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T39 824-832 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T40 864-897 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T41 911-919 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T22 44-45 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T23 80-81 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T24 148-154 http://purl.obolibrary.org/obo/CL_0000084 denotes T-cell
T25 188-193 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T26 237-238 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T27 347-354 http://purl.obolibrary.org/obo/CL_0000084 denotes T cells
T28 368-377 http://purl.obolibrary.org/obo/CLO_0001658 denotes activated
T29 383-391 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T30 403-407 http://purl.obolibrary.org/obo/PR_000001408 denotes CD38
T31 415-418 http://purl.obolibrary.org/obo/PR_000001004 denotes CD4
T32 646-650 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T33 646-650 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T34 704-707 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T35 729-730 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T21 249-251 Chemical denotes Th http://purl.obolibrary.org/obo/CHEBI_33385
T22 412-414 Chemical denotes DR http://purl.obolibrary.org/obo/CHEBI_73445
T23 489-491 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120
T24 546-548 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T7 786-800 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T5 749-770 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammatory response

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T15 126-179 Sentence denotes Cellular immunity and T-cell polarisation in COVID-19

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
89 171-179 Disease denotes COVID-19 MESH:C000657245
117 288-292 Gene denotes IFNγ Gene:3458
118 415-418 Gene denotes CD4 Gene:920
119 419-423 Gene denotes CCR6 Gene:1235
120 439-487 Gene denotes granulocyte–macrophage colony-stimulating factor Gene:1437
121 489-495 Gene denotes GM-CSF Gene:1437
122 516-520 Gene denotes IFNγ Gene:3458
123 546-551 Gene denotes IL-17 Gene:3605
124 556-560 Gene denotes IFNγ Gene:3458
134 589-597 Species denotes patients Tax:9606
135 824-834 Species denotes SARS-CoV-2 Tax:2697049
136 864-909 Species denotes severe acute respiratory syndrome coronavirus Tax:694009
137 911-919 Species denotes SARS-CoV Tax:694009
139 298-306 Disease denotes COVID-19 MESH:C000657245
140 603-611 Disease denotes COVID-19 MESH:C000657245
141 646-657 Disease denotes lung injury MESH:D055370
142 671-703 Disease denotes Middle East respiratory syndrome MESH:D018352

2_test

Id Subject Object Predicate Lexical cue
33073244-30774631-66244504 293-294 30774631 denotes 1
33073244-21576823-66244505 296-297 21576823 denotes 3
33073244-32085846-66244506 425-426 32085846 denotes 4
33073244-29414327-66244507 771-772 29414327 denotes 7