PMC:7546716 / 25-733
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T2 | 23-27 | Body_part | denotes | heel | http://purl.org/sig/ont/fma/fma24994 |
T3 | 62-70 | Body_part | denotes | cytokine | http://purl.org/sig/ont/fma/fma84050 |
T4 | 223-231 | Body_part | denotes | cytokine | http://purl.org/sig/ont/fma/fma84050 |
T5 | 233-244 | Body_part | denotes | interleukin | http://purl.org/sig/ont/fma/fma86578 |
T6 | 246-248 | Body_part | denotes | IL | http://purl.org/sig/ont/fma/fma86578 |
T7 | 414-416 | Body_part | denotes | IL | http://purl.org/sig/ont/fma/fma86578 |
T8 | 457-462 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T9 | 522-540 | Body_part | denotes | regulatory T cells | http://purl.org/sig/ont/fma/fma84070 |
T10 | 535-540 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T11 | 663-667 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T1 | 23-27 | Body_part | denotes | heel | http://purl.obolibrary.org/obo/UBERON_0015875 |
T2 | 663-667 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T1 | 31-39 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T2 | 84-92 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T3 | 295-303 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T4 | 590-637 | Disease | denotes | severe acute respiratory syndrome coronavirus 2 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T5 | 590-623 | Disease | denotes | severe acute respiratory syndrome | http://purl.obolibrary.org/obo/MONDO_0005091 |
T6 | 663-675 | Disease | denotes | lung disease | http://purl.obolibrary.org/obo/MONDO_0005275 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 183-184 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T2 | 257-258 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T3 | 457-462 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T4 | 522-540 | http://purl.obolibrary.org/obo/CL_0000815 | denotes | regulatory T cells |
T5 | 663-667 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
T6 | 663-667 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T1 | 246-248 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
T3 | 414-416 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T1 | 663-675 | Phenotype | denotes | lung disease | http://purl.obolibrary.org/obo/HP_0002088 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2 | 42-50 | Sentence | denotes | Abstract |
T3 | 51-165 | Sentence | denotes | The unique cytokine signature of COVID-19 might provide clues to disease mechanisms and possible future therapies. |
T4 | 166-385 | Sentence | denotes | Here, we propose a pathogenic model in which the alarmin cytokine, interleukin (IL)-33, is a key player in driving all stages of COVID-19 disease (ie, asymptomatic, mild–moderate, severe–critical, and chronic–fibrotic). |
T5 | 386-676 | Sentence | denotes | In susceptible individuals, IL-33 release by damaged lower respiratory cells might induce dysregulated GATA-binding factor 3-expressing regulatory T cells, thereby breaking immune tolerance and eliciting severe acute respiratory syndrome coronavirus 2-induced autoinflammatory lung disease. |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
3 | 31-39 | Disease | denotes | COVID-19 | MESH:C000657245 |
23 | 233-252 | Gene | denotes | interleukin (IL)-33 | Gene:90865 |
24 | 414-419 | Gene | denotes | IL-33 | Gene:90865 |
25 | 489-510 | Gene | denotes | GATA-binding factor 3 | Gene:2625 |
33 | 590-637 | Species | denotes | severe acute respiratory syndrome coronavirus 2 | Tax:2697049 |
36 | 84-92 | Disease | denotes | COVID-19 | MESH:C000657245 |
37 | 295-303 | Disease | denotes | COVID-19 | MESH:C000657245 |
38 | 646-675 | Disease | denotes | autoinflammatory lung disease | MESH:D008171 |