PMC:7546120 / 3590-3982
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T25 | 209-219 | Body_part | denotes | lymph node | http://purl.org/sig/ont/fma/fma5034 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T27 | 89-105 | Body_part | denotes | pleural effusion | http://purl.obolibrary.org/obo/UBERON_0000175 |
| T28 | 209-219 | Body_part | denotes | lymph node | http://purl.obolibrary.org/obo/UBERON_0000029 |
| T29 | 209-214 | Body_part | denotes | lymph | http://purl.obolibrary.org/obo/UBERON_0002391 |
| T30 | 252-268 | Body_part | denotes | pleural effusion | http://purl.obolibrary.org/obo/UBERON_0000175 |
| T31 | 371-388 | Body_part | denotes | pleural effusions | http://purl.obolibrary.org/obo/UBERON_0000175 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T22 | 20-28 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T23 | 31-40 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T24 | 351-366 | Disease | denotes | lymphadenopathy | http://purl.obolibrary.org/obo/MONDO_0005833 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T48 | 89-105 | http://purl.obolibrary.org/obo/UBERON_0000175 | denotes | pleural effusion |
| T49 | 140-143 | http://purl.obolibrary.org/obo/CLO_0001000 | denotes | 3–5 |
| T50 | 174-176 | http://purl.obolibrary.org/obo/CLO_0001022 | denotes | Li |
| T51 | 174-176 | http://purl.obolibrary.org/obo/CLO_0007314 | denotes | Li |
| T52 | 209-219 | http://purl.obolibrary.org/obo/UBERON_0000029 | denotes | lymph node |
| T53 | 252-268 | http://purl.obolibrary.org/obo/UBERON_0000175 | denotes | pleural effusion |
| T54 | 323-324 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T55 | 371-388 | http://purl.obolibrary.org/obo/UBERON_0000175 | denotes | pleural effusions |
| T56 | 389-392 | http://purl.obolibrary.org/obo/CLO_0001000 | denotes | 3–5 |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T5 | 174-176 | Chemical | denotes | Li | http://purl.obolibrary.org/obo/CHEBI_30145 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T29 | 0-285 | Sentence | denotes | With respect to the SARS-CoV-2 pneumonia, review of literature reveals the prevalence of pleural effusion can be as high as 14% in patients.3–5 In one of the largest trials, Li et al.3 described intrathoracic lymph node enlargement in 67% of cases and pleural effusion in 14% of cases. |
| T30 | 286-392 | Sentence | denotes | Patients with more severe cases have a higher prevalence of both lymphadenopathy and pleural effusions.3–5 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T18 | 31-40 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T19 | 89-105 | Phenotype | denotes | pleural effusion | http://purl.obolibrary.org/obo/HP_0002202 |
| T20 | 252-268 | Phenotype | denotes | pleural effusion | http://purl.obolibrary.org/obo/HP_0002202 |
| T21 | 351-366 | Phenotype | denotes | lymphadenopathy | http://purl.obolibrary.org/obo/HP_0002716 |
| T22 | 371-388 | Phenotype | denotes | pleural effusions | http://purl.obolibrary.org/obo/HP_0002202 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 87 | 131-139 | Species | denotes | patients | Tax:9606 |
| 88 | 286-294 | Species | denotes | Patients | Tax:9606 |
| 89 | 20-40 | Disease | denotes | SARS-CoV-2 pneumonia | MESH:C000657245 |
| 90 | 89-105 | Disease | denotes | pleural effusion | MESH:D010996 |
| 91 | 252-268 | Disease | denotes | pleural effusion | MESH:D010996 |
| 92 | 351-366 | Disease | denotes | lymphadenopathy | MESH:D008206 |
| 93 | 371-388 | Disease | denotes | pleural effusions | MESH:D010996 |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32936903-32394279-133098630 | 142-143 | 32394279 | denotes | 5 |
| 32936903-32394279-133098631 | 183-184 | 32394279 | denotes | 3 |
| 32936903-32394279-133098632 | 391-392 | 32394279 | denotes | 5 |